KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dosa00010 dosa01200 dosa01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:dosa00010 dosa01200 dosa01230 dosa01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dosa00010 dosa00020 dosa01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dosa00010 dosa00020 dosa00620 dosa00785 dosa01200 dosa01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:dosa00020 dosa01200 dosa01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dosa00020 dosa01200 dosa01210 dosa01230 dosa01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dosa00020 dosa01200 dosa01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dosa00030 dosa01200 dosa01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dosa00030 dosa01200 dosa01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dosa00030 dosa01200 dosa01230 dosa01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:dosa00030 dosa00230 dosa01200 dosa01230 dosa01100]

Other carbohydrate metabolism
M00081 Pectin degradation [PATH:dosa00040 dosa01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:dosa00051 dosa00053 dosa01240 dosa01100 dosa01110]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:dosa00500 dosa01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dosa00520 dosa01250 dosa01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:dosa00520 dosa01250 dosa01100]
M00012 Glyoxylate cycle [PATH:dosa00630 dosa01200 dosa01100 dosa01110]
M00532 Photorespiration [PATH:dosa00630 dosa01200 dosa01100 dosa01110]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:dosa00562 dosa01100]

Energy metabolism
Carbon fixation
M00165 Reductive pentose phosphate cycle (Calvin cycle) [PATH:dosa00710 dosa01200 dosa01100]
M00166 Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P [PATH:dosa00710 dosa01200 dosa01100]
M00167 Reductive pentose phosphate cycle, glyceraldehyde-3P => ribulose-5P [PATH:dosa00710 dosa01200 dosa01100]
M00168 CAM (Crassulacean acid metabolism), dark [PATH:dosa00620 dosa00710 dosa01200 dosa01100]
M00169 CAM (Crassulacean acid metabolism), light [PATH:dosa00620 dosa00710 dosa01200 dosa01100]
M00172 C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:dosa00620 dosa00710 dosa01200 dosa01100]
M00171 C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:dosa00710 dosa01200 dosa01100]
M00170 C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:dosa00710 dosa01200 dosa01100]

Methane metabolism
Nitrogen metabolism
M00531 Assimilatory nitrate reduction, nitrate => ammonia [PATH:dosa00910 dosa01100]

Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:dosa00920 dosa01100]

Photosynthesis
ATP synthesis
M00148 Succinate dehydrogenase (ubiquinone) [PATH:dosa00190]

Lipid metabolism
Fatty acid metabolism
M00083 Fatty acid biosynthesis, elongation [PATH:dosa00061 dosa01212 dosa01100]
M00415 Fatty acid elongation in endoplasmic reticulum [PATH:dosa00062 dosa01040 dosa01212 dosa01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:dosa00061 dosa00071 dosa01212 dosa01100]
M00087 beta-Oxidation [PATH:dosa00071 dosa01212 dosa01100]

Sterol biosynthesis
M00917 Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:dosa00100 dosa01100 dosa01110]

Lipid metabolism
M00089 Triacylglycerol biosynthesis [PATH:dosa00561 dosa01100]
M00098 Acylglycerol degradation [PATH:dosa00561 dosa01100]
M00092 Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:dosa00564 dosa01100]
M00100 Sphingosine degradation [PATH:dosa00600 dosa01100]
M00113 Jasmonic acid biosynthesis [PATH:dosa00592 dosa01100 dosa01110]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dosa00230 dosa01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dosa00230 dosa01232 dosa01240 dosa01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dosa00230 dosa01232 dosa01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dosa00230 dosa00240 dosa01232 dosa01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dosa00240 dosa01232 dosa01240 dosa01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dosa00240 dosa01232 dosa01100]
M00046 Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:dosa00240 dosa00410 dosa00770 dosa01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:dosa00260 dosa01200 dosa01230 dosa01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dosa00260 dosa01230 dosa01100 dosa01110]
M00621 Glycine cleavage system [PATH:dosa00260 dosa00630 dosa00785 dosa01200 dosa01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:dosa00270 dosa00920 dosa01200 dosa01230 dosa01100 dosa01110]
M00034 Methionine salvage pathway [PATH:dosa00270 dosa01100]
M00368 Ethylene biosynthesis, methionine => ethylene [PATH:dosa00270 dosa01100 dosa01110]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dosa00290 dosa00770 dosa01210 dosa01230 dosa01100 dosa01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dosa00290 dosa01230 dosa01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dosa00290 dosa01210 dosa01230 dosa01100 dosa01110]
M00036 Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:dosa00280 dosa01100]

Lysine metabolism
Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:dosa00220 dosa01210 dosa01230 dosa01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:dosa00220 dosa01230 dosa01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:dosa00330 dosa01230 dosa01100]
M00970 Proline degradation, proline => glutamate [PATH:dosa00330 dosa01100]

Polyamine biosynthesis
M00134 Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:dosa00330 dosa01100]

Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dosa00400 dosa01230 dosa01100 dosa01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:dosa00400 dosa01230 dosa01100 dosa01110]
M00910 Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:dosa00400 dosa01230 dosa01100 dosa01110]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:dosa00400 dosa01230 dosa01100 dosa01110]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH:dosa00350 dosa01100]
M00936 Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:dosa00380 dosa01100 dosa01110]

Other amino acid metabolism
M00027 GABA (gamma-Aminobutyrate) shunt [PATH:dosa00250 dosa00650 dosa01100]
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH:dosa00480 dosa01240 dosa01100]

Glycan metabolism
Glycan biosynthesis
M00073 N-glycan precursor trimming [PATH:dosa00510 dosa01100]

Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:dosa00740 dosa01240 dosa01100 dosa01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:dosa00750 dosa01240 dosa01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:dosa00760 dosa01240 dosa01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:dosa00770 dosa01240 dosa01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dosa00780 dosa01240 dosa01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dosa00785 dosa01240 dosa01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:dosa00785 dosa01240 dosa01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dosa00860 dosa01240 dosa01100 dosa01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:dosa00130 dosa01240 dosa01100 dosa01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:dosa00130 dosa01240 dosa01100 dosa01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
M00095 C5 isoprenoid biosynthesis, mevalonate pathway [PATH:dosa00900 dosa01100 dosa01110]
M00096 C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:dosa00900 dosa01100 dosa01110]
M00366 C10-C20 isoprenoid biosynthesis, plants [PATH:dosa00900 dosa01100 dosa01110]

Plant terpenoid biosynthesis
M00097 beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:dosa00906 dosa01100 dosa01110]
M00372 Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:dosa00906 dosa01100 dosa01110]
M00927 Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:dosa00904 dosa01100 dosa01110]
M00928 Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:dosa00904 dosa01100 dosa01110]

Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
M00039 Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:dosa00940 dosa01100 dosa01110]
M00137 Flavanone biosynthesis, phenylalanine => naringenin [PATH:dosa00940 dosa00941 dosa01100 dosa01110]
M00138 Flavonoid biosynthesis, naringenin => pelargonidin [PATH:dosa00941 dosa01100 dosa01110]
M00953 Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid [PATH:dosa00999 dosa01100 dosa01110]

Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation