KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: eco00010 eco01200 eco01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: eco00010 eco01200 eco01230 eco01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: eco00010 eco00020 eco01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: eco00010 eco00020 eco00620 eco00785 eco01200 eco01210 eco01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: eco00020 eco01200 eco01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: eco00020 eco01200 eco01210 eco01230 eco01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: eco00020 eco01200 eco01210 eco01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: eco00030 eco01200 eco01100 eco01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: eco00030 eco01200 eco01100 eco01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: eco00030 eco01200 eco01230 eco01100 eco01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: eco00030 eco00230 eco01200 eco01230 eco01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: eco00030 eco01200 eco01100 eco01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: eco00040 eco01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: eco00040 eco00030 eco01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: eco00040 eco00030 eco01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: eco00052 eco01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: eco00052 eco01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH: eco00053 eco01100 eco01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: eco00500 eco01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: eco00500 eco01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: eco00520 eco01250 eco01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: eco00520 eco00052 eco01250 eco01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: eco00520 eco01250 eco01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: eco00520 eco01250 eco01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH: eco00520 eco01100]
M00012 Glyoxylate cycle [PATH: eco00630 eco01200 eco01100 eco01110]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH: eco00410 eco00640 eco01200 eco01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: eco00280 eco00630 eco00640 eco01200 eco01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: eco00562 eco01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: eco00562 eco01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH: eco00190 eco01100]
M00142 NADH:ubiquinone oxidoreductase, mitochondria [PATH: eco00190 eco01100]
M00143 NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH: eco00190 eco01100]
M00149 Succinate dehydrogenase, prokaryotes [PATH: eco00190 eco01100]
M00150 Fumarate reductase, prokaryotes [PATH: eco00190 eco01100]
M00148 Succinate dehydrogenase (ubiquinone) [PATH: eco00190 eco01100]
M00151 Cytochrome bc1 complex respiratory unit [PATH: eco00190 eco01100]
M00154 Cytochrome c oxidase [PATH: eco00190 eco01100]
M00155 Cytochrome c oxidase, prokaryotes [PATH: eco00190 eco01100]
M00153 Cytochrome bd ubiquinol oxidase [PATH: eco00190]
M00417 Cytochrome o ubiquinol oxidase [PATH: eco00190 eco01100]
M00156 Cytochrome c oxidase, cbb3-type [PATH: eco00190 eco01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH: eco00190 eco01100]
M00158 F-type ATPase, eukaryotes [PATH: eco00190 eco01100]
M00160 V-type ATPase, eukaryotes [PATH: eco00190 eco01100]
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
M00057 Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH: eco01100]
M00058 Glycosaminoglycan biosynthesis, chondroitin sulfate backbone [PATH: eco01100]
M00059 Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH: eco01100]
M00076 Dermatan sulfate degradation [PATH: eco01100]
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: eco00730 eco01240 eco01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: eco00730 eco01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: eco00740 eco01240 eco01100 eco01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: eco00750 eco01240 eco01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: eco00760 eco01240 eco01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: eco00770 eco01240 eco01100 eco01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: eco00770 eco01240 eco01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: eco00780 eco01240 eco01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: eco00780 eco01240 eco01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: eco00785 eco01240 eco01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: eco00785 eco01240 eco01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: eco00785 eco01240 eco01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: eco00790 eco00670 eco01240 eco01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH: eco00790 eco01240 eco01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: eco00790 eco01240 eco01100]
M00140 C1-unit interconversion, prokaryotes [PATH: eco00670 eco01240 eco01100]
M00141 C1-unit interconversion, eukaryotes [PATH: eco00670 eco01240 eco01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: eco00860 eco01240 eco01100 eco01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH: eco00860 eco01240 eco01100 eco01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: eco00860 eco01240 eco01100 eco01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: eco00860 eco01240 eco01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: eco00130 eco01240 eco01100 eco01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: eco00130 eco01240 eco01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: eco00130 eco01240 eco01100 eco01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: eco00130 eco01240 eco01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
M00746 Multidrug resistance, repression of porin OmpF
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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