KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: enz00010 enz01200 enz01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: enz00010 enz01200 enz01230 enz01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: enz00010 enz00020 enz01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: enz00010 enz00020 enz00620 enz00785 enz01200 enz01210 enz01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: enz00020 enz01200 enz01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: enz00020 enz01200 enz01210 enz01230 enz01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: enz00020 enz01200 enz01210 enz01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: enz00030 enz01200 enz01100 enz01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: enz00030 enz01200 enz01100 enz01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: enz00030 enz01200 enz01230 enz01100 enz01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: enz00030 enz00230 enz01200 enz01230 enz01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: enz00030 enz01200 enz01100 enz01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:enz00040 enz00030 enz01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:enz00040 enz00030 enz01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:enz00052 enz01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:enz00052 enz01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:enz00053 enz01100 enz01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:enz00500 enz01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:enz00500 enz01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:enz00500 enz01100 enz01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:enz00520 enz01250 enz01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:enz00520 enz00052 enz01250 enz01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:enz00520 enz01250 enz01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:enz00520 enz01100]
M00793 dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:enz00521 enz00523 enz00541 enz01250 enz01100 enz01110]
M00012 Glyoxylate cycle [PATH:enz00630 enz01200 enz01100 enz01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Other polysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: enz00730 enz01240 enz01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: enz00730 enz01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: enz00740 enz01240 enz01100 enz01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: enz00750 enz01240 enz01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: enz00770 enz01240 enz01100 enz01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: enz00770 enz01240 enz01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: enz00780 enz01240 enz01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: enz00780 enz01240 enz01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: enz00785 enz01240 enz01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: enz00790 enz00670 enz01240 enz01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: enz00790 enz01240 enz01100]
M00988 PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH: enz00790 enz01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: enz00860 enz01240 enz01100 enz01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: enz00860 enz01240 enz01100 enz01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: enz00130 enz01240 enz01100 enz01110]
M00989 Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: enz00130 enz01240]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: enz00130 enz01240 enz01100 enz01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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