KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: kph00010 kph01200 kph01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: kph00010 kph01200 kph01230 kph01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: kph00010 kph00020 kph01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: kph00010 kph00020 kph00620 kph00785 kph01200 kph01210 kph01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: kph00020 kph01200 kph01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: kph00020 kph01200 kph01210 kph01230 kph01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: kph00020 kph01200 kph01210 kph01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: kph00030 kph01200 kph01100 kph01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: kph00030 kph01200 kph01100 kph01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: kph00030 kph01200 kph01230 kph01100 kph01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: kph00030 kph00230 kph01200 kph01230 kph01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: kph00030 kph01200 kph01100 kph01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:kph00040 kph00030 kph01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:kph00040 kph00030 kph01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:kph00052 kph01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:kph00052 kph01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:kph00053 kph01100 kph01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:kph00500 kph01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:kph00500 kph01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:kph00520 kph01250 kph01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:kph00520 kph00052 kph01250 kph01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:kph00520 kph01250 kph01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:kph00520 kph01100]
M00012 Glyoxylate cycle [PATH:kph00630 kph01200 kph01100 kph01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:kph00280 kph00630 kph00640 kph01200 kph01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: kph00730 kph01240 kph01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: kph00730 kph01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: kph00740 kph01240 kph01100 kph01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: kph00750 kph01240 kph01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: kph00750 kph01240 kph01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: kph00760 kph01240 kph01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: kph00770 kph01240 kph01100 kph01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: kph00770 kph01240 kph01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: kph00780 kph01240 kph01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: kph00780 kph01240 kph01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: kph00785 kph01240 kph01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: kph00790 kph00670 kph01240 kph01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: kph00860 kph01240 kph01100 kph01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: kph00860 kph01240 kph01100 kph01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: kph00860 kph01240 kph01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: kph00860 kph01240 kph01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: kph00860 kph01240 kph01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: kph00130 kph01240 kph01100 kph01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: kph00130 kph01240 kph01100 kph01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
M00824 9-membered enediyne core biosynthesis, malonyl-CoA => 3-hydroxyhexadeca-4,6,8,10,12,14-hexaenoyl-ACP => 9-membered enediyne core [PATH: kph01100 kph01110]
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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