KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pmul00010 pmul01200 pmul01230 pmul01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pmul00010 pmul00020 pmul01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pmul00010 pmul00020 pmul00620 pmul01200 pmul01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pmul00020 pmul01200 pmul01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pmul00020 pmul01200 pmul01210 pmul01230 pmul01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pmul00020 pmul01200 pmul01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pmul00030 pmul01200 pmul01100 pmul01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pmul00030 pmul01200 pmul01100 pmul01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pmul00030 pmul01200 pmul01230 pmul01100 pmul01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pmul00030 pmul00230 pmul01200 pmul01230 pmul01100]

Other carbohydrate metabolism
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pmul00052 pmul01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:pmul00053 pmul01100 pmul01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pmul00500 pmul01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pmul00520 pmul00052 pmul01100]

Energy metabolism
Carbon fixation
M00168 CAM (Crassulacean acid metabolism), dark [PATH:pmul00620 pmul01200 pmul01100 pmul01120]
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pmul00430 pmul00620 pmul01200 pmul01100 pmul01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00150 Fumarate reductase, prokaryotes [PATH:pmul00190]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:pmul00190]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:pmul00061 pmul01212 pmul01100]
M00083 Fatty acid biosynthesis, elongation [PATH:pmul00061 pmul01212 pmul01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:pmul00061 pmul01212 pmul01100]

Sterol biosynthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pmul00564 pmul01100]

Nucleotide metabolism
Purine metabolism
M00048 Inosine monophosphate biosynthesis, PRPP + glutamine => IMP [PATH:pmul00230 pmul01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pmul00230 pmul01240 pmul01100]
M00050 Guanine ribonucleotide biosynthesis IMP => GDP,GTP [PATH:pmul00230 pmul01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pmul00240 pmul01240 pmul01100]
M00053 Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP [PATH:pmul00240 pmul01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:pmul00260 pmul00680 pmul01200 pmul01230 pmul01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pmul00260 pmul01230 pmul01100 pmul01110]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:pmul00270 pmul00920 pmul01200 pmul01230 pmul01100 pmul01110]
M00017 Methionine biosynthesis, apartate => homoserine => methionine [PATH:pmul00270 pmul01230 pmul01100]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pmul00290 pmul00770 pmul01210 pmul01230 pmul01100 pmul01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pmul00290 pmul01230 pmul01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pmul00290 pmul01210 pmul01230 pmul01100 pmul01110]

Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pmul00300 pmul01230 pmul01100]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:pmul00220 pmul01210 pmul01230 pmul01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:pmul00220 pmul01230 pmul01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:pmul00330 pmul01230 pmul01100]

Polyamine biosynthesis
Histidine metabolism
M00026 Histidine biosynthesis, PRPP => histidine [PATH:pmul00340 pmul01230 pmul01100 pmul01110]

Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pmul00400 pmul01230 pmul01100 pmul01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:pmul00400 pmul01230 pmul01100 pmul01110]
M00533 Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pmul00350 pmul01220 pmul01100 pmul01120]

Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
M00060 KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pmul00540 pmul01100]
M00063 CMP-KDO biosynthesis [PATH:pmul00540 pmul01100]
M00064 ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pmul00540 pmul01100]

Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:pmul00730 pmul01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pmul00740 pmul01240 pmul01100 pmul01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pmul00750 pmul01240 pmul01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pmul00770 pmul01240 pmul01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pmul00780 pmul01240 pmul01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pmul00780 pmul01240 pmul01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pmul00785 pmul01240 pmul01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pmul00790 pmul00670 pmul01240 pmul01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pmul00790 pmul01240 pmul01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pmul00860 pmul01240 pmul01100 pmul01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pmul00130 pmul01240 pmul01100 pmul01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:pmul00130 pmul01240 pmul01100 pmul01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity