KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2

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KEGG Modules

Pathway module Structural complex
    Energy metabolism Genetic information processing
      DNA polymerase Replication system
      Repair system
      RNA polymerase
        M00183 RNA polymerase, bacteria [BR:ko03021 ko03400] [PATH:stm03020]
      Spliceosome
      RNA processing Ribosome Proteasome
      Ubiquitin system
      Protein processing
    Environmental information processing
      Mineral and organic ion transport system Saccharide, polyol, and lipid transport system
        M00194 Maltose/maltodextrin transport system [BR:ko02000] [PATH:stm02010]
        M00214 Methyl-galactoside transport system [BR:ko02000] [PATH:stm02010]
        M00219 AI-2 transport system [BR:ko02000] [PATH:stm02010]
        M00212 Ribose transport system [BR:ko02000] [PATH:stm02010]
        M00198 Putative sn-glycerol-phosphate transport system [BR:ko02000] [PATH:stm02010]
        M00210 Phospholipid transport system [BR:ko02000] [PATH:stm02010]
        M00211 Putative ABC transport system [BR:ko02000]
      Phosphate and amino acid transport system
        M00222 Phosphate transport system [BR:ko02000] [PATH:stm02010]
        M00225 Lysine/arginine/ornithine transport system [BR:ko02000] [PATH:stm02010]
        M00226 Histidine transport system [BR:ko02000] [PATH:stm02010]
        M00227 Glutamine transport system [BR:ko02000] [PATH:stm02010]
        M00229 Arginine transport system [BR:ko02000] [PATH:stm02010]
        M00230 Glutamate/aspartate transport system [BR:ko02000] [PATH:stm02010]
        M00234 Cystine transport system [BR:ko02000] [PATH:stm02010]
        M00237 Branched-chain amino acid transport system [BR:ko02000] [PATH:stm02010]
        M00238 D-Methionine transport system [BR:ko02000] [PATH:stm02010]
        M00236 Putative polar amino acid transport system [BR:ko02000]
      Peptide and nickel transport system Metallic cation, iron-siderophore and vitamin B12 transport system ABC-2 type and other transport systems
        M00250 Lipopolysaccharide transport system [BR:ko02000] [PATH:stm02010]
        M00320 Lipopolysaccharide export system [BR:ko02000] [PATH:stm02010]
        M00255 Lipoprotein-releasing system [BR:ko02000] [PATH:stm02010]
        M00259 Heme transport system [BR:ko02000] [PATH:stm02010]
        M00256 Cell division transport system [BR:ko02000] [PATH:stm02010]
        M00258 Putative ABC transport system [BR:ko02000]
        M00254 ABC-2 type transport system [BR:ko02000]
      Drug efflux transporter/pump
        M00707 Multidrug resistance, SmdAB/MdlAB transporter
        M00711 Multidrug resistance, efflux pump MdtIJ
      Phosphotransferase system (PTS) Bacterial secretion system
        M00330 Adhesin protein transport system [BR:ko02044]
        M00332 Type III secretion system [BR:ko02044] [PATH:stm03070]
        M00334 Type VI secretion system [BR:ko02044] [PATH:stm03070]
        M00335 Sec (secretion) system [BR:ko02044] [PATH:stm03070]
        M00336 Twin-arginine translocation (Tat) system [BR:ko02044] [PATH:stm03070]
Functional set
    Metabolism
      Aminoacyl tRNA Nucleotide sugar
    Environmental information processing
      Two-component regulatory system
        M00434 PhoR-PhoB (phosphate starvation response) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00444 PhoQ-PhoP (magnesium transport) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00445 EnvZ-OmpR (osmotic stress response) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00446 RstB-RstA two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00447 CpxA-CpxR (envelope stress response) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00449 CreC-CreB (phosphate regulation) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00450 BaeS-BaeR (envelope stress response) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00451 BasS-BasR (antimicrobial peptide resistance) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00453 QseC-QseB (quorum sensing) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00454 KdpD-KdpE (potassium transport) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00455 TorS-TorR (TMAO respiration) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00456 ArcB-ArcA (anoxic redox control) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00457 TctE-TctD (tricarboxylic acid transport) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00471 NarX-NarL (nitrate respiration) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00472 NarQ-NarP (nitrate respiration) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00473 UhpB-UhpA (hexose phosphates uptake) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00474 RcsC-RcsD-RcsB (capsule synthesis) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00475 BarA-UvrY (central carbon metabolism) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00486 CitA-CitB (citrate fermentation) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00488 DcuS-DcuR (C4-dicarboxylate metabolism) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00497 GlnL-GlnG (nitrogen regulation) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00499 HydH-HydG (metal tolerance) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00502 GlrK-GlrR (amino sugar metabolism) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00503 PgtB-PgtA (phosphoglycerate transport) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00514 TtrS-TtrR (tetrathionate respiration) two-component regulatory system [BR:ko02022] [PATH:stm02020]
        M00663 SsrA-SsrB two-component regulatory system [BR:ko02022] [PATH:stm02020]
      Drug efflux transporter/pump
        M00709 Macrolide resistance, MacAB-TolC transporter
        M00646 Multidrug resistance, efflux pump AcrAD-TolC [PATH:stm02020]
        M00647 Multidrug resistance, efflux pump AcrAB-TolC/SmeDEF
        M00648 Multidrug resistance, efflux pump MdtABC [PATH:stm02020]
        M00701 Multidrug resistance, efflux pump EmrAB
        M00768 Multidrug resistance, efflux pump GesABC
      Drug resistance
        M00742 Aminoglycoside resistance, protease FtsH
        M00743 Aminoglycoside resistance, protease HtpX
        M00721 Cationic antimicrobial peptide (CAMP) resistance, arnBCADTEF operon [PATH:stm01503]
        M00722 Cationic antimicrobial peptide (CAMP) resistance, phosphoethanolamine transferase PmrC [PATH:stm01503]
        M00724 Cationic antimicrobial peptide (CAMP) resistance, palmitoyl transferase PagP [PATH:stm01503]
        M00727 Cationic antimicrobial peptide (CAMP) resistance, N-acetylmuramoyl-L-alanine amidase AmiA and AmiC [PATH:stm01503]
        M00728 Cationic antimicrobial peptide (CAMP) resistance, envelope protein folding and degrading factors DegP and DsbA [PATH:stm01503]
    Cell signaling
Signature module
    Gene set
      Pathogenicity
      Drug resistance
        M00744 Cationic antimicrobial peptide (CAMP) resistance, protease PgtE
        M00696 Multidrug resistance, efflux pump AcrEF-TolC
      Plant pathogenicity
      Symbiosis
    Module set
      Metabolic capacity
        M00616 Sulfate-sulfur assimilation