KEGG   Dinoroseobacter shibae

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Genome information

T numberT00612
Org codedsh
AliasesDINSH, 398580
Full nameDinoroseobacter shibae
DefinitionDinoroseobacter shibae DFL 12 = DSM 16493
Annotationmanual
TaxonomyTAX: 398580
    LineageBacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter
Data sourceGenBank (Assembly: GCA_000018145.1)
BioProject: 17417
Original DBJGI, RoseoBase
KeywordsDenitrification
CommentSymbiosis with dinoflagellates.
Synthesizes the vitamins B1 and B12 for which its host is auxotrophic.
Capable of growing anaerobically using the alternative electron acceptors nitrate and dimethylsulfoxide.
Capable of performing light-driven ATP synthesis using bacteriochlorophyll a in the presence of oxygen.
Has the large number of extrachromosomal replicons.
Synthesizes novel acylated homoserine lactone (AHL) compounds.
Isolated from cells of Prorocentrum lima (benthic dinoflagellate).
ChromosomeCircular
    SequenceGB: CP000830
    Length3789584
PlasmidpDSHI01; Circular
    SequenceGB: CP000831
    Length190506
PlasmidpDSHI02; Circular
    SequenceGB: CP000832
    Length152970
PlasmidpDSHI03; Circular
    SequenceGB: CP000833
    Length126304
PlasmidpDSHI04; Circular
    SequenceGB: CP000834
    Length86208
PlasmidpDSHI05; Circular
    SequenceGB: CP000835
    Length72296
StatisticsNumber of nucleotides: 4417868
Number of protein genes: 4194
Number of RNA genes: 50
Created2007
ReferencePMID: 19741735
    AuthorsWagner-Dobler I et al.
    TitleThe complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea.
    JournalISME J 4:61-77 (2010)
DOI: 10.1038/ismej.2009.94