T number | T01084 |
Org_code | vvi |
Name | Vitis vinifera (wine grape) |
Annotation | yes |
Taxonomy | TAX: 29760 |
Lineage | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: plants [BR:br08613] |
Data source | RefSeq (Assembly: GCF_030704535.1 Complete Genome) BioProject: 1013121 |
Original DB | Genoscope |
Keywords | Photosynthesis |
Chromosome | 1 |
Sequence | RS: NC_081805 |
Length | 27822162 |
Chromosome | 2 |
Sequence | RS: NC_081806 |
Length | 20941263 |
Chromosome | 3 |
Sequence | RS: NC_081807 |
Length | 21317290 |
Chromosome | 4 |
Sequence | RS: NC_081808 |
Length | 25934928 |
Chromosome | 5 |
Sequence | RS: NC_081809 |
Length | 26899771 |
Chromosome | 7 |
Sequence | RS: NC_081811 |
Length | 31654362 |
Chromosome | 8 |
Sequence | RS: NC_081812 |
Length | 23763023 |
Chromosome | 9 |
Sequence | RS: NC_081813 |
Length | 24372199 |
Chromosome | 10 |
Sequence | RS: NC_081814 |
Length | 27504061 |
Chromosome | 11 |
Sequence | RS: NC_081815 |
Length | 20048508 |
Chromosome | 12 |
Sequence | RS: NC_081816 |
Length | 24706008 |
Chromosome | 13 |
Sequence | RS: NC_081817 |
Length | 29842242 |
Chromosome | 14 |
Sequence | RS: NC_081818 |
Length | 30475315 |
Chromosome | 15 |
Sequence | RS: NC_081819 |
Length | 23565456 |
Chromosome | 16 |
Sequence | RS: NC_081820 |
Length | 27608946 |
Chromosome | 17 |
Sequence | RS: NC_081821 |
Length | 19942836 |
Chromosome | 18 |
Sequence | RS: NC_081822 |
Length | 36684271 |
Chromosome | 19 |
Sequence | RS: NC_081823 |
Length | 27218600 |
Chromosome | MT; Circular |
Sequence | RS: NC_012119 |
Length | 773279 |
Chromosome | CP; Circular |
Sequence | RS: NC_007957 |
Length | 160928 |
Statistics | Number of nucleotides: 471235448 Number of protein genes: 25187 Number of RNA genes: 1238
|
Created | 2009 |
Reference | PMID: 37213686 |
Authors | Shi X, Cao S, Wang X, Huang S, Wang Y, Liu Z, Liu W, Leng X, Peng Y, Wang N, et al. |
Title | The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding. |
Journal | Hortic Res 10:uhad061 (2023) DOI: 10.1093/hr/uhad061 |
Reference | PMID: 17721507 |
Authors | Jaillon O, Aury JM, Noel B, Policriti A, Clepet C, Casagrande A, Choisne N, Aubourg S, Vitulo N, Jubin C, et al. |
Title | The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. |
Journal | Nature 449:463-7 (2007) DOI: 10.1038/nature06148 |
Reference | PMID: 16603088 |
Authors | Jansen RK, Kaittanis C, Saski C, Lee SB, Tomkins J, Alverson AJ, Daniell H |
Title | Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids. |
Journal | BMC Evol Biol 6:32 (2006) DOI: 10.1186/1471-2148-6-32 |