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KEGG Organisms: Complete Genomes

Eukaryotes: 457    Bacteria: 4872    Archaea: 278
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Eukaryotes

Category Organisms Source
Animals Vertebrates Mammals hsa Homo sapiens (human) RefSeq
ptr Pan troglodytes (chimpanzee) RefSeq
pps Pan paniscus (bonobo) RefSeq
ggo Gorilla gorilla gorilla (western lowland gorilla) RefSeq
pon Pongo abelii (Sumatran orangutan) RefSeq
nle Nomascus leucogenys (northern white-cheeked gibbon) RefSeq
mcc Macaca mulatta (rhesus monkey) RefSeq
mcf Macaca fascicularis (crab-eating macaque) RefSeq
csab Chlorocebus sabaeus (green monkey) RefSeq
rro Rhinopithecus roxellana (golden snub-nosed monkey) RefSeq
rbb Rhinopithecus bieti (black snub-nosed monkey) RefSeq
cjc Callithrix jacchus (white-tufted-ear marmoset) RefSeq
sbq Saimiri boliviensis boliviensis (Bolivian squirrel monkey) RefSeq
mmu Mus musculus (mouse) RefSeq
rno Rattus norvegicus (rat) RefSeq
cge Cricetulus griseus (Chinese hamster) RefSeq
ngi Nannospalax galili (Upper Galilee mountains blind mole rat) RefSeq
hgl Heterocephalus glaber (naked mole rat) RefSeq
ccan Castor canadensis (American beaver) RefSeq
ocu Oryctolagus cuniculus (rabbit) RefSeq
tup Tupaia chinensis (Chinese tree shrew) RefSeq
cfa Canis familiaris (dog) RefSeq
aml Ailuropoda melanoleuca (giant panda) RefSeq
umr Ursus maritimus (polar bear) RefSeq
oro Odobenus rosmarus divergens (Pacific walrus) RefSeq
fca Felis catus (domestic cat) RefSeq
ptg Panthera tigris altaica (Amur tiger) RefSeq
aju Acinonyx jubatus (cheetah) RefSeq
bta Bos taurus (cow) RefSeq
bom Bos mutus (wild yak) RefSeq
biu Bos indicus (zebu cattle) RefSeq
phd Pantholops hodgsonii (chiru) RefSeq
chx Capra hircus (goat) RefSeq
oas Ovis aries (sheep) RefSeq
ssc Sus scrofa (pig) RefSeq
cfr Camelus ferus (Wild Bactrian camel) RefSeq
cdk Camelus dromedarius (Arabian camel) RefSeq
bacu Balaenoptera acutorostrata scammoni (minke whale) RefSeq
lve Lipotes vexillifer (Yangtze River dolphin) RefSeq
oor Orcinus orca (killer whale) RefSeq
ecb Equus caballus (horse) RefSeq
epz Equus przewalskii (Przewalski's horse) RefSeq
eai Equus asinus (ass) RefSeq
myb Myotis brandtii (Brandt's bat) RefSeq
myd Myotis davidii RefSeq
hai Hipposideros armiger (great roundleaf bat) RefSeq
rss Rhinolophus sinicus (Chinese rufous horseshoe bat) RefSeq
pale Pteropus alecto (black flying fox) RefSeq
lav Loxodonta africana (African savanna elephant) RefSeq
tmu Trichechus manatus latirostris (Florida manatee) RefSeq
mdo Monodelphis domestica (opossum) RefSeq
shr Sarcophilus harrisii (Tasmanian devil) RefSeq
oaa Ornithorhynchus anatinus (platypus) RefSeq
Birds gga Gallus gallus (chicken) RefSeq
mgp Meleagris gallopavo (turkey) RefSeq
cjo Coturnix japonica (Japanese quail) RefSeq
apla Anas platyrhynchos (mallard) RefSeq
acyg Anser cygnoides domesticus (swan goose) RefSeq
tgu Taeniopygia guttata (zebra finch) RefSeq
gfr Geospiza fortis (medium ground-finch) RefSeq
fab Ficedula albicollis (collared flycatcher) RefSeq
phi Pseudopodoces humilis (Tibetan ground-tit) RefSeq
pmaj Parus major (Great Tit) RefSeq
ccae Cyanistes caeruleus (blue tit) RefSeq
ccw Corvus cornix (hooded crow) RefSeq
fpg Falco peregrinus (peregrine falcon) RefSeq
fch Falco cherrug (Saker falcon) RefSeq
clv Columba livia (rock pigeon) RefSeq
egz Egretta garzetta (little egret) RefSeq
aam Apteryx australis mantelli (brown kiwi) RefSeq
Reptiles asn Alligator sinensis (Chinese alligator) RefSeq
amj Alligator mississippiensis (American alligator) RefSeq
pss Pelodiscus sinensis (Chinese soft-shelled turtle) RefSeq
cmy Chelonia mydas (green sea turtle) RefSeq
cpic Chrysemys picta (western painted turtle) RefSeq
acs Anolis carolinensis (green anole) RefSeq
pvt Pogona vitticeps (central bearded dragon) RefSeq
pbi Python bivittatus (Burmese python) RefSeq
gja Gekko japonicus RefSeq
Amphibians xla Xenopus laevis (African clawed frog) RefSeq
xtr Xenopus tropicalis (western clawed frog) RefSeq
npr Nanorana parkeri RefSeq
Fishes dre Danio rerio (zebrafish) RefSeq
srx Sinocyclocheilus rhinocerous RefSeq
sanh Sinocyclocheilus anshuiensis RefSeq
sgh Sinocyclocheilus grahami RefSeq
ccar Cyprinus carpio (common carp) RefSeq
ipu Ictalurus punctatus (channel catfish) RefSeq
amex Astyanax mexicanus (Mexican tetra) RefSeq
tru Takifugu rubripes (torafugu) RefSeq
tng Tetraodon nigroviridis (spotted green pufferfish) GenBank
lco Larimichthys crocea (large yellow croaker) RefSeq
ncc Notothenia coriiceps (black rockcod) RefSeq
mze Maylandia zebra (zebra mbuna) RefSeq
ola Oryzias latipes (Japanese medaka) RefSeq
xma Xiphophorus maculatus (southern platyfish) RefSeq
pret Poecilia reticulata (guppy) RefSeq
nfu Nothobranchius furzeri (turquoise killifish) RefSeq
kmr Kryptolebias marmoratus (mangrove rivulus) RefSeq
csem Cynoglossus semilaevis (tongue sole) RefSeq
lcf Lates calcarifer (barramundi perch) RefSeq
sdu Seriola dumerili (greater amberjack) RefSeq
hcq Hippocampus comes (tiger tail seahorse) RefSeq
bpec Boleophthalmus pectinirostris (great blue-spotted mudskipper) RefSeq
malb Monopterus albus (swamp eel) RefSeq
sasa Salmo salar (Atlantic salmon) RefSeq
otw Oncorhynchus tshawytscha (Chinook salmon) RefSeq
els Esox lucius (northern pike) RefSeq
sfm Scleropages formosus (Asian bonytongue) RefSeq
lcm Latimeria chalumnae (coelacanth) RefSeq
Cartilaginous fishes cmk Callorhinchus milii (elephant shark) RefSeq
Lancelets bfo Branchiostoma floridae (Florida lancelet) RefSeq
Ascidians cin Ciona intestinalis (sea squirt) RefSeq
Echinoderms spu Strongylocentrotus purpuratus (purple sea urchin) RefSeq
aplc Acanthaster planci (crown-of-thorns starfish) RefSeq
Hemichordates sko Saccoglossus kowalevskii (acorn worm) RefSeq
Arthropods Insects dme Drosophila melanogaster (fruit fly) RefSeq
dpo Drosophila pseudoobscura pseudoobscura RefSeq
dan Drosophila ananassae RefSeq
der Drosophila erecta RefSeq
dpe Drosophila persimilis RefSeq
dse Drosophila sechellia RefSeq
dsi Drosophila simulans RefSeq
dwi Drosophila willistoni RefSeq
dya Drosophila yakuba RefSeq
dgr Drosophila grimshawi RefSeq
dmo Drosophila mojavensis RefSeq
dvi Drosophila virilis RefSeq
mde Musca domestica (house fly) RefSeq
aga Anopheles gambiae (mosquito) RefSeq
aag Aedes aegypti (yellow fever mosquito) RefSeq
cqu Culex quinquefasciatus (southern house mosquito) RefSeq
ame Apis mellifera (honey bee) RefSeq
bim Bombus impatiens (common eastern bumble bee) RefSeq
bter Bombus terrestris (buff-tailed bumblebee) RefSeq
soc Solenopsis invicta (red fire ant) RefSeq
aec Acromyrmex echinatior (Panamanian leafcutter ant) RefSeq
acep Atta cephalotes (leaf cutting ant) RefSeq
pbar Pogonomyrmex barbatus (red harvester ant) RefSeq
hst Harpegnathos saltator (Jerdon's jumping ant) RefSeq
dqu Dinoponera quadriceps RefSeq
cfo Camponotus floridanus (Florida carpenter ant) RefSeq
lhu Linepithema humile (Argentine ant) RefSeq
pgc Pseudomyrmex gracilis RefSeq
pcf Polistes canadensis RefSeq
nvi Nasonia vitripennis (jewel wasp) RefSeq
mdl Microplitis demolitor RefSeq
tca Tribolium castaneum (red flour beetle) RefSeq
dpa Dendroctonus ponderosae (mountain pine beetle) RefSeq
nvl Nicrophorus vespilloides RefSeq
bmor Bombyx mori (domestic silkworm) RefSeq
dpl Danaus plexippus (monarch butterfly) GenBank
pmac Papilio machaon (common yellow swallowtail) RefSeq
prap Pieris rapae (cabbage white) RefSeq
haw Helicoverpa armigera (cotton bollworm) RefSeq
pxy Plutella xylostella (diamondback moth) RefSeq
api Acyrthosiphon pisum (pea aphid) RefSeq
dnx Diuraphis noxia (Russian wheat aphid) RefSeq
clec Cimex lectularius (bed bug) RefSeq
phu Pediculus humanus corporis (human body louse) RefSeq
zne Zootermopsis nevadensis RefSeq
fcd Folsomia candida RefSeq
Crustaceans dpx Daphnia pulex (common water flea) GenBank
Mites and ticks isc Ixodes scapularis (black-legged tick) RefSeq
tut Tetranychus urticae (two-spotted spider mite) RefSeq
Nematodes cel Caenorhabditis elegans (nematode) RefSeq
cbr Caenorhabditis briggsae RefSeq
nai Necator americanus RefSeq
bmy Brugia malayi (filaria) RefSeq
loa Loa loa (eye worm) RefSeq
tsp Trichinella spiralis RefSeq
Annelids hro Helobdella robusta RefSeq
Mollusks lgi Lottia gigantea (owl limpet) RefSeq
crg Crassostrea gigas (Pacific oyster) RefSeq
myi Mizuhopecten yessoensis (Yesso scallop) RefSeq
obi Octopus bimaculoides RefSeq
Brachiopodas lak Lingula anatina RefSeq
Flatworms smm Schistosoma mansoni RefSeq
shx Schistosoma haematobium RefSeq
ovi Opisthorchis viverrini RefSeq
egl Echinococcus granulosus RefSeq
Cnidarians nve Nematostella vectensis (sea anemone) RefSeq
epa Exaiptasia pallida RefSeq
adf Acropora digitifera (stony coral) RefSeq
hmg Hydra vulgaris RefSeq
Placozoans tad Trichoplax adhaerens RefSeq
Poriferans aqu Amphimedon queenslandica (sponge) RefSeq
Plants Eudicots Mustard family ath Arabidopsis thaliana (thale cress) RefSeq
aly Arabidopsis lyrata (lyrate rockcress) RefSeq
crb Capsella rubella RefSeq
csat Camelina sativa (false flax) RefSeq
eus Eutrema salsugineum RefSeq
brp Brassica rapa (field mustard) RefSeq
bna Brassica napus (rape) RefSeq
boe Brassica oleracea (wild cabbage) RefSeq
Caper family thj Tarenaya hassleriana (spider flower) RefSeq
Papaya family cpap Carica papaya (papaya) RefSeq
Rue family cit Citrus sinensis (Valencia orange) RefSeq
cic Citrus clementina (mandarin orange) RefSeq
Mallow family tcc Theobroma cacao (cacao) RefSeq
gra Gossypium raimondii RefSeq
ghi Gossypium hirsutum (upland cotton) RefSeq
dzi Durio zibethinus (durian) RefSeq
Myrtle family egr Eucalyptus grandis (rose gum) RefSeq
Pea family gmx Glycine max (soybean) RefSeq
pvu Phaseolus vulgaris (common bean) RefSeq
vra Vigna radiata (mung bean) RefSeq
var Vigna angularis (adzuki bean) RefSeq
ccaj Cajanus cajan (pigeon pea) RefSeq
mtr Medicago truncatula (barrel medic) RefSeq
cam Cicer arietinum (chickpea) RefSeq
lja Lotus japonicus Kazusa
adu Arachis duranensis RefSeq
aip Arachis ipaensis RefSeq
lang Lupinus angustifolius (narrow-leaved blue lupine) RefSeq
Rose family fve Fragaria vesca (woodland strawberry) RefSeq
pper Prunus persica (peach) RefSeq
pmum Prunus mume (Japanese apricot) RefSeq
pavi Prunus avium (sweet cherry) RefSeq
mdm Malus domestica (apple) RefSeq
pxb Pyrus x bretschneideri (Chinese white pear) RefSeq
Buckthorn family zju Ziziphus jujuba (Chinese jujube) RefSeq
Cucumber family csv Cucumis sativus (cucumber) RefSeq
cmo Cucumis melo (muskmelon) RefSeq
mcha Momordica charantia (bitter melon) RefSeq
cmax Cucurbita maxima (winter squash) RefSeq
cmos Cucurbita moschata (crookneck pumpkin) RefSeq
cpep Cucurbita pepo subsp. pepo (vegetable marrow) RefSeq
Spurge family rcu Ricinus communis (castor bean) RefSeq
jcu Jatropha curcas RefSeq
hbr Hevea brasiliensis (rubber tree) RefSeq
Willow family pop Populus trichocarpa (black cottonwood) RefSeq
Walnut family jre Juglans regia (English walnut) RefSeq
Grape family vvi Vitis vinifera (wine grape) RefSeq
Nightshade family sly Solanum lycopersicum (tomato) RefSeq
spen Solanum pennellii RefSeq
sot Solanum tuberosum (potato) RefSeq
cann Capsicum annuum RefSeq
nta Nicotiana tabacum (common tobacco) RefSeq
nsy Nicotiana sylvestris RefSeq
nto Nicotiana tomentosiformis RefSeq
Morning-glory family ini Ipomoea nil (Japanese morning glory) RefSeq
Sesame family sind Sesamum indicum (sesame) RefSeq
Olive family oeu Olea europaea var. sylvestris (wild olive) RefSeq
Daisy family han Helianthus annuus (common sunflower) RefSeq
lsv Lactuca sativa (garden lettuce) RefSeq
ccav Cynara cardunculus var. scolymus (artichoke) RefSeq
Parsley family dcr Daucus carota (carrot) RefSeq
Amaranth family bvg Beta vulgaris (sugar beet) RefSeq
soe Spinacia oleracea (spinach) RefSeq
Lotus family nnu Nelumbo nucifera (sacred lotus) RefSeq
Monocots Grass family osa Oryza sativa japonica (Japanese rice) (RefSeq) RefSeq
dosa Oryza sativa japonica (Japanese rice) (RAPDB) RAP-DB
obr Oryza brachyantha (malo sina) RefSeq
bdi Brachypodium distachyon RefSeq
ats Aegilops tauschii (wheat D) RefSeq
sbi Sorghum bicolor (sorghum) RefSeq
zma Zea mays (maize) RefSeq
sita Setaria italica (foxtail millet) RefSeq
Palm family pda Phoenix dactylifera (date palm) RefSeq
egu Elaeis guineensis (African oil palm) RefSeq
Banana family mus Musa acuminata (wild Malaysian banana) RefSeq
Orchid family dct Dendrobium officinale RefSeq
peq Phalaenopsis equestris RefSeq
Asparagus family aof Asparagus officinalis (garden asparagus) RefSeq
Basal Magnoliophyta Amborella family atr Amborella trichopoda RefSeq
Ferns smo Selaginella moellendorffii RefSeq
Mosses ppp Physcomitrella patens subsp. patens RefSeq
Green algae cre Chlamydomonas reinhardtii RefSeq
vcn Volvox carteri f. nagariensis RefSeq
mng Monoraphidium neglectum RefSeq
olu Ostreococcus lucimarinus RefSeq
ota Ostreococcus tauri RefSeq
bpg Bathycoccus prasinos RefSeq
mis Micromonas commoda RefSeq
mpp Micromonas pusilla RefSeq
csl Coccomyxa subellipsoidea RefSeq
cvr Chlorella variabilis RefSeq
apro Auxenochlorella protothecoides RefSeq
Red algae cme Cyanidioschyzon merolae RefSeq
gsl Galdieria sulphuraria RefSeq
ccp Chondrus crispus (carragheen) RefSeq
Fungi Ascomycetes Saccharomycetes sce Saccharomyces cerevisiae (budding yeast) RefSeq
ago Ashbya gossypii (Eremothecium gossypii) RefSeq
erc Eremothecium cymbalariae RefSeq
kla Kluyveromyces lactis RefSeq
kmx Kluyveromyces marxianus RefSeq
lth Lachancea thermotolerans RefSeq
vpo Vanderwaltozyma polyspora RefSeq
zro Zygosaccharomyces rouxii RefSeq
cgr Candida glabrata RefSeq
ncs Naumovozyma castellii RefSeq
ndi Naumovozyma dairenensis RefSeq
tpf Tetrapisispora phaffii RefSeq
tbl Tetrapisispora blattae RefSeq
tdl Torulaspora delbrueckii RefSeq
kaf Kazachstania africana RefSeq
ppa Komagataella phaffii RefSeq
dha Debaryomyces hansenii RefSeq
pic Scheffersomyces stipitis RefSeq
pgu Meyerozyma guilliermondii RefSeq
spaa Spathaspora passalidarum RefSeq
lel Lodderomyces elongisporus RefSeq
cal Candida albicans RefSeq
ctp Candida tropicalis RefSeq
cot Candida orthopsilosis RefSeq
cdu Candida dubliniensis RefSeq
cten Yamadazyma tenuis RefSeq
yli Yarrowia lipolytica RefSeq
clu Clavispora lusitaniae ATCC 42720 RefSeq
clus Clavispora lusitaniae CBS 6936 GenBank
caur Candida auris RefSeq
slb Sugiyamaella lignohabitans RefSeq
Sordariomycetes ncr Neurospora crassa RefSeq
nte Neurospora tetrasperma RefSeq
smp Sordaria macrospora RefSeq
pan Podospora anserina RefSeq
ttt Thielavia terrestris RefSeq
mtm Thermothelomyces thermophila RefSeq
cthr Chaetomium thermophilum RefSeq
mgr Magnaporthe oryzae RefSeq
tmn Phaeoacremonium minimum RefSeq
ssck Sporothrix schenckii RefSeq
fgr Fusarium graminearum RefSeq
fpu Fusarium pseudograminearum RefSeq
fvr Fusarium verticillioides RefSeq
fox Fusarium oxysporum RefSeq
nhe Nectria haematococca RefSeq
tre Trichoderma reesei RefSeq
maw Metarhizium acridum RefSeq
maj Metarhizium robertsii RefSeq
cmt Cordyceps militaris RefSeq
plj Purpureocillium lilacinum RefSeq
val Verticillium alfalfae RefSeq
vda Verticillium dahliae RefSeq
cfj Colletotrichum fioriniae GenBank
ela Eutypa lata GenBank
pfy Pestalotiopsis fici RefSeq
Leotiomycetes ssl Sclerotinia sclerotiorum RefSeq
bfu Botrytis cinerea RefSeq
mbe Marssonina brunnea RefSeq
psco Phialocephala scopiformis RefSeq
glz Glarea lozoyensis RefSeq
Eurotiomycetes ani Aspergillus nidulans RefSeq
afm Aspergillus fumigatus RefSeq
aor Aspergillus oryzae RefSeq
ang Aspergillus niger RefSeq
afv Aspergillus flavus RefSeq
act Aspergillus clavatus RefSeq
nfi Aspergillus fischeri RefSeq
pcs Penicillium rubens RefSeq
pdp Penicillium digitatum RefSeq
cim Coccidioides immitis RefSeq
cpw Coccidioides posadasii RefSeq
pbl Paracoccidioides lutzii Pb01 RefSeq
pbn Paracoccidioides brasiliensis Pb18 RefSeq
ure Uncinocarpus reesii RefSeq
abe Trichophyton benhamiae RefSeq
tve Trichophyton verrucosum RefSeq
aje Histoplasma capsulatum RefSeq
Dothideomycetes pno Parastagonospora nodorum RefSeq
pte Pyrenophora teres GenBank
bze Bipolaris zeicola RefSeq
bsc Bipolaris sorokiniana RefSeq
bor Bipolaris oryzae RefSeq
aalt Alternaria alternata RefSeq
ztr Zymoseptoria tritici RefSeq
pfj Pseudocercospora fijiensis RefSeq
bcom Baudoinia panamericana RefSeq
npa Neofusicoccum parvum RefSeq
Pezizomycetes tml Tuber melanosporum RefSeq
Schizosaccharomycetes spo Schizosaccharomyces pombe (fission yeast) RefSeq
Basidiomycetes cne Cryptococcus neoformans var. neoformans JEC21 RefSeq
cnb Cryptococcus neoformans var. neoformans B-3501A RefSeq
cgi Cryptococcus gattii RefSeq
tms Tremella mesenterica RefSeq
ppl Postia placenta GenBank
tvs Trametes versicolor RefSeq
dsq Dichomitus squalens RefSeq
pco Phanerochaete carnosa RefSeq
shs Stereum hirsutum RefSeq
hir Heterobasidion irregulare RefSeq
psq Punctularia strigosozonata RefSeq
adl Auricularia subglabra GenBank
fme Fomitiporia mediterranea RefSeq
gtr Gloeophyllum trabeum RefSeq
lbc Laccaria bicolor RefSeq
mpr Moniliophthora perniciosa GenBank
mrr Moniliophthora roreri GenBank
cci Coprinopsis cinerea RefSeq
scm Schizophyllum commune RefSeq
abp Agaricus bisporus var. burnettii JB137-S8 RefSeq
abv Agaricus bisporus var. bisporus H97 RefSeq
cput Coniophora puteana RefSeq
sla Serpula lacrymans RefSeq
wse Wallemia mellicola RefSeq
wic Wallemia ichthyophaga RefSeq
uma Ustilago maydis RefSeq
pfp Anthracocystis flocculosa RefSeq
mgl Malassezia globosa RefSeq
pgr Puccinia graminis RefSeq
mlr Melampsora larici-populina RefSeq
Microsporidians ecu Encephalitozoon cuniculi RefSeq
ein Encephalitozoon intestinalis RefSeq
ehe Encephalitozoon hellem RefSeq
ero Encephalitozoon romaleae RefSeq
nce Nosema ceranae GenBank
Protists Choanoflagellates mbr Monosiga brevicollis RefSeq
sre Salpingoeca rosetta RefSeq
Amoebozoa Dictyostelium ddi Dictyostelium discoideum (cellular slime mold) RefSeq
dpp Dictyostelium purpureum (cellular slime mold) RefSeq
Cavenderia dfa Cavenderia fasciculata (cellular slime mold) RefSeq
Entamoeba ehi Entamoeba histolytica RefSeq
edi Entamoeba dispar RefSeq
eiv Entamoeba invadens RefSeq
Acanthamoeba acan Acanthamoeba castellanii RefSeq
Alveolates Apicomplexans pfa Plasmodium falciparum 3D7 RefSeq
pfd Plasmodium falciparum Dd2 Broad
pfh Plasmodium falciparum HB3 Broad
pyo Plasmodium yoelii RefSeq
pcb Plasmodium chabaudi RefSeq
pbe Plasmodium berghei RefSeq
pkn Plasmodium knowlesi RefSeq
pvx Plasmodium vivax RefSeq
pcy Plasmodium cynomolgi RefSeq
tan Theileria annulata RefSeq
tpv Theileria parva RefSeq
tot Theileria orientalis RefSeq
beq Theileria equi RefSeq
bbo Babesia bovis RefSeq
bmic Babesia microti RefSeq
cpv Cryptosporidium parvum RefSeq
cho Cryptosporidium hominis RefSeq
tgo Toxoplasma gondii RefSeq
Ciliates tet Tetrahymena thermophila RefSeq
ptm Paramecium tetraurelia RefSeq
Dinoflagellates smin Symbiodinium minutum OIST
Stramenopiles Diatoms pti Phaeodactylum tricornutum RefSeq
fcy Fragilariopsis cylindrus GenBank
tps Thalassiosira pseudonana RefSeq
Pelagophytes aaf Aureococcus anophagefferens RefSeq
Eustigmatophytes ngd Nannochloropsis gaditana RefSeq
Oomycetes pif Phytophthora infestans RefSeq
psoj Phytophthora sojae RefSeq
spar Saprolegnia parasitica RefSeq
Haptophyta ehx Emiliania huxleyi RefSeq
Cryptomonads gtt Guillardia theta RefSeq
Euglenozoa Kinetoplasts tbr Trypanosoma brucei RefSeq
tcr Trypanosoma cruzi RefSeq
lma Leishmania major RefSeq
lif Leishmania infantum RefSeq
ldo Leishmania donovani RefSeq
lmi Leishmania mexicana RefSeq
lbz Leishmania braziliensis RefSeq
Heterolobosea Amoeboflagellate ngr Naegleria gruberi RefSeq
Parabasalids Trichomonads tva Trichomonas vaginalis RefSeq
Diplomonads gla Giardia lamblia RefSeq

Prokaryotes

Category Organisms Year Source
Bacteria Gammaproteobacteria - Enterobacteria Escherichia eco Escherichia coli K-12 MG1655 1997 RefSeq
ecj Escherichia coli K-12 W3110 2001 GenBank
ecd Escherichia coli K-12 DH10B 2008 GenBank
ebw Escherichia coli BW2952 2009 GenBank
ecok Escherichia coli K-12 MDS42 2013 GenBank
ece Escherichia coli O157:H7 EDL933 (EHEC) 2001 GenBank
ecs Escherichia coli O157:H7 Sakai (EHEC) 2001 RefSeq
ecf Escherichia coli O157:H7 EC4115 (EHEC) 2008 GenBank
etw Escherichia coli O157:H7 TW14359 (EHEC) 2009 GenBank
elx Escherichia coli O157:H7 Xuzhou21 (EHEC) 2012 GenBank
eoj Escherichia coli O26:H11 11368 (EHEC) 2009 GenBank
eoi Escherichia coli O111:H- 11128 (EHEC) 2009 GenBank
eoh Escherichia coli O103:H2 12009 (EHEC) 2009 GenBank
ecoo Escherichia coli O145:H28 RM13514 (EHEC) 2014 GenBank
ecoh Escherichia coli O145:H28 RM13516 (EHEC) 2014 GenBank
ecg Escherichia coli O127:H6 E2348/69 (EPEC) 2008 GenBank
eok Escherichia coli O55:H7 CB9615 (EPEC) 2010 GenBank
elr Escherichia coli O55:H7 RM12579 (EPEC) 2012 GenBank
eso Escherichia coli O104:H4 2009EL-2071 2012 GenBank
esm Escherichia coli O104:H4 2009EL-2050 2012 GenBank
esl Escherichia coli O104:H4 2011C-3493 2012 RefSeq
ecw Escherichia coli O139:H28 E24377A (ETEC) 2007 GenBank
elh Escherichia coli O78:H11:K80 H10407 (ETEC) 2012 GenBank
eun Escherichia coli UMNK88 (ETEC, porcine) 2012 GenBank
ecc Escherichia coli O6:K2:H1 CFT073 (UPEC) 2002 GenBank
ecp Escherichia coli O6:K15:H31 536 (UPEC) 2006 GenBank
eci Escherichia coli O18:K1:H7 UTI89 (UPEC) 2006 GenBank
ecv Escherichia coli APEC O1 (APEC) 2006 GenBank
ecx Escherichia coli O9 HS (commensal) 2007 GenBank
ecm Escherichia coli SMS-3-5 (environmental) 2008 GenBank
ecy Escherichia coli O152:H28 SE11 (commensal) 2008 GenBank
ecr Escherichia coli O8 IAI1 (commensal) 2009 GenBank
ecq Escherichia coli O81 ED1a (commensal) 2009 GenBank
eck Escherichia coli 55989 (EAEC) 2009 GenBank
ect Escherichia coli O7:K1 IAI39 (ExPEC) 2009 RefSeq
eoc Escherichia coli O7:K1 CE10 2012 GenBank
eum Escherichia coli O17:K52:H18 UMN026 (ExPEC) 2009 RefSeq
ecz Escherichia coli O45:K1:H7 S88 (ExPEC) 2009 GenBank
elo Escherichia coli O44:H18 042 (EAEC) 2012 GenBank
eln Escherichia coli O83:H1 NRG 857C 2012 RefSeq
ese Escherichia coli O150:H5 SE15 (commensal) 2012 GenBank
ecl Escherichia coli ATCC 8739 2008 GenBank
ebr Escherichia coli B REL606 2009 GenBank
ebd Escherichia coli BL21-Gold(DE3)pLysS AG 2009 GenBank
eko Escherichia coli KO11FL 2012 GenBank
ekf Escherichia coli KO11FL 2012 GenBank
eab Escherichia coli ABU 83972 2012 GenBank
edh Escherichia coli DH1 2012 GenBank
edj Escherichia coli DH1 2012 GenBank
eih Escherichia coli IHE3034 2012 GenBank
ena Escherichia coli NA114 (UPEC) 2012 GenBank
elu Escherichia coli UM146 2012 GenBank
elw Escherichia coli W 2012 GenBank
ell Escherichia coli W 2012 GenBank
elc Escherichia coli clone D i14 2012 GenBank
eld Escherichia coli clone D i2 2012 GenBank
elp Escherichia coli P12b 2012 GenBank
ebl Escherichia coli BL21(DE3) 2012 GenBank
ebe Escherichia coli BL21(DE3) 2012 GenBank
elf Escherichia coli LF82 2012 GenBank
ecoa Escherichia coli APEC O78 2013 GenBank
ecol Escherichia coli LY180 2013 GenBank
ecoi Escherichia coli PMV-1 2013 GenBank
ecoj Escherichia coli JJ1886 2013 GenBank
ecos Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC) 2016 GenBank
efe Escherichia fergusonii 2008 GenBank
eal Escherichia albertii 2015 GenBank
ema Escherichia marmotae 2018 GenBank
Salmonella sty Salmonella enterica subsp. enterica serovar Typhi CT18 2001 RefSeq
stt Salmonella enterica subsp. enterica serovar Typhi Ty2 2003 GenBank
sex Salmonella enterica subsp. enterica serovar Typhi P-stx-12 2012 GenBank
sent Salmonella enterica subsp. enterica serovar Typhi Ty21a 2013 GenBank
stm Salmonella enterica subsp. enterica serovar Typhimurium LT2 2001 RefSeq
seo Salmonella enterica subsp. enterica serovar Typhimurium 14028S 2012 GenBank
sev Salmonella enterica subsp. enterica serovar Typhimurium D23580 2012 GenBank
sey Salmonella enterica subsp. enterica serovar Typhimurium SL1344 2012 GenBank
sem Salmonella enterica subsp. enterica serovar Typhimurium T000240 2012 GenBank
sej Salmonella enterica subsp. enterica serovar Typhimurium UK-1 2012 GenBank
seb Salmonella enterica subsp. enterica serovar Typhimurium ST4/74 2012 GenBank
sef Salmonella enterica subsp. enterica serovar Typhimurium 798 2012 GenBank
setu Salmonella enterica subsp. enterica serovar Typhimurium U288 2013 GenBank
setc Salmonella enterica subsp. enterica serovar Typhimurium var. 5- CFSAN001921 2013 GenBank
senr Salmonella enterica subsp. enterica serovar Typhimurium DT2 2013 GenBank
send Salmonella enterica subsp. enterica serovar Typhimurium DT104 2013 GenBank
seni Salmonella enterica subsp. enterica serovar Typhimurium 138736 2014 GenBank
seen Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 2013 GenBank
spt Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150 2004 GenBank
sek Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 2008 GenBank
spq Salmonella enterica subsp. enterica serovar Paratyphi B 2007 GenBank
sei Salmonella enterica subsp. enterica serovar Paratyphi C 2009 GenBank
sec Salmonella enterica subsp. enterica serovar Choleraesuis 2005 GenBank
seh Salmonella enterica subsp. enterica serovar Heidelberg SL476 2008 GenBank
shb Salmonella enterica subsp. enterica serovar Heidelberg B182 2012 GenBank
senh Salmonella enterica subsp. enterica serovar Heidelberg CFSAN002069 2013 GenBank
seeh Salmonella enterica subsp. enterica serovar Heidelberg 41578 2013 GenBank
see Salmonella enterica subsp. enterica serovar Newport SL254 2008 GenBank
senn Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1 2013 GenBank
sew Salmonella enterica subsp. enterica serovar Schwarzengrund 2008 GenBank
sea Salmonella enterica subsp. enterica serovar Agona SL483 2008 GenBank
sens Salmonella enterica subsp. enterica serovar Agona 24249 2013 GenBank
sed Salmonella enterica subsp. enterica serovar Dublin 2008 GenBank
seg Salmonella enterica subsp. enterica serovar Gallinarum 287/91 2008 GenBank
sel Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078 2012 GenBank
sega Salmonella enterica subsp. enterica serovar Gallinarum/pullorum CDC1983-67 2013 GenBank
set Salmonella enterica subsp. enterica serovar Enteritidis P125109 2008 GenBank
sena Salmonella enterica subsp. enterica serovar Enteritidis EC20090135 2015 GenBank
seno Salmonella enterica subsp. enterica serovar Enteritidis EC20090193 2015 GenBank
senv Salmonella enterica subsp. enterica serovar Enteritidis EC20090332 2015 GenBank
senq Salmonella enterica subsp. enterica serovar Enteritidis EC20090531 2015 GenBank
senl Salmonella enterica subsp. enterica serovar Enteritidis OLF-SE1-1019-1 2015 GenBank
senj Salmonella enterica subsp. enterica serovar Javiana 2013 GenBank
seec Salmonella enterica subsp. enterica serovar Cubana 2013 GenBank
seeb Salmonella enterica subsp. enterica serovar Bareilly 2013 GenBank
seep Salmonella enterica subsp. enterica serovar Pullorum 2013 GenBank
senb Salmonella enterica subsp. enterica serovar Bovismorbificans 2013 GenBank
sene Salmonella enterica subsp. enterica serovar Thompson 2013 GenBank
senc Salmonella enterica subsp. enterica serovar Tennessee 2015 GenBank
ses Salmonella enterica subsp. arizonae 2007 GenBank
sbg Salmonella bongori NCTC 12419 2011 GenBank
sbz Salmonella bongori N268-08 2013 GenBank
sbv Salmonella bongori serovar 48:z41:-- 2014 GenBank
Shigella sfl Shigella flexneri 301 (serotype 2a) 2002 RefSeq
sfx Shigella flexneri 2457T (serotype 2a) 2003 GenBank
sfv Shigella flexneri 8401 (serotype 5b) 2006 GenBank
sfe Shigella flexneri 2002017 (serotype Fxv) 2012 GenBank
sfn Shigella flexneri 2003036 2014 GenBank
sfs Shigella flexneri Shi06HN006 (serotype Yv) 2014 GenBank
sft Shigella flexneri NCTC1 2015 GenBank
ssn Shigella sonnei Ss046 2005 GenBank
sbo Shigella boydii Sb227 2005 GenBank
sbc Shigella boydii CDC 3083-94 2008 GenBank
sdy Shigella dysenteriae Sd197 2005 RefSeq
sdz Shigella dysenteriae 1617 2013 GenBank
shq Shigella sp. PAMC 28760 2016 GenBank
Enterobacter ent Enterobacter sp. 638 2007 GenBank
enc Enterobacter cloacae subsp. cloacae ATCC 13047 2010 RefSeq
eno Enterobacter cloacae subsp. cloacae ENHKU01 2012 GenBank
eclo Enterobacter cloacae subsp. cloacae NCTC 9394 2013 GenBank
eec Enterobacter cloacae EcWSU1 2012 GenBank
enl Enterobacter cloacae subsp. dissolvens SDM 2012 GenBank
eclg Enterobacter cloacae GGT036 2014 GenBank
ecle Enterobacter cloacae ECNIH2 2014 GenBank
ecln Enterobacter cloacae ECNIH4 2014 GenBank
ecli Enterobacter cloacae ECNIH5 2015 GenBank
eclx Enterobacter hormaechei subsp. oharae 2015 GenBank
ecly Enterobacter hormaechei subsp. steigerwaltii 2015 GenBank
eclz Enterobacter hormaechei subsp. hormaechei 2015 GenBank
ehm Enterobacter hormaechei CAV1176 2017 GenBank
exf Enterobacter hormaechei subsp. xiangfangensis 2017 GenBank
ecla Enterobacter hormaechei subsp. hoffmannii ECNIH3 2014 GenBank
eclc Enterobacter hormaechei subsp. hoffmannii ECR091 2014 GenBank
eas Enterobacter asburiae LF7a 2011 GenBank
eau Enterobacter asburiae L1 2014 GenBank
ekb Enterobacter kobei 2017 GenBank
elg Enterobacter ludwigii 2017 GenBank
ecls Enterobacter cloacae complex sp. 35734 2017 GenBank
ecan Enterobacter cancerogenus 2018 GenBank
ern Enterobacter roggenkampii 2018 GenBank
enr Enterobacter sp. R4-368 2013 GenBank
enx Enterobacter sp. E20 2016 GenBank
enf Enterobacter sp. FY-07 2016 GenBank
Cronobacter esa Cronobacter sakazakii ATCC BAA-894 2007 GenBank
csk Cronobacter sakazakii ES15 2012 GenBank
csz Cronobacter sakazakii Sp291 2013 GenBank
csj Cronobacter sakazakii ATCC 29544 2015 GenBank
ccon Cronobacter condimenti 2015 GenBank
cdm Cronobacter dublinensis 2015 GenBank
csi Cronobacter malonaticus CMCC45402 2013 GenBank
cmj Cronobacter malonaticus LMG 23826 2015 GenBank
cui Cronobacter universalis 2015 GenBank
cmw Cronobacter muytjensii 2015 GenBank
ctu Cronobacter turicensis 2009 GenBank
Klebsiella kpn Klebsiella pneumoniae subsp. pneumoniae MGH 78578 2007 GenBank
kpu Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 2009 GenBank
kpm Klebsiella pneumoniae subsp. pneumoniae HS11286 2012 RefSeq
kpp Klebsiella pneumoniae subsp. pneumoniae 1084 2012 GenBank
kpk Klebsiella pneumoniae subsp. pneumoniae KP5-1 2014 GenBank
kph Klebsiella pneumoniae subsp. pneumoniae KPNIH24 2014 GenBank
kpz Klebsiella pneumoniae subsp. pneumoniae KPNIH27 2014 GenBank
kpv Klebsiella pneumoniae subsp. pneumoniae KPNIH29 2014 GenBank
kpw Klebsiella pneumoniae subsp. pneumoniae KPNIH30 2014 GenBank
kpy Klebsiella pneumoniae subsp. pneumoniae KPNIH31 2014 GenBank
kpg Klebsiella pneumoniae subsp. pneumoniae KPNIH32 2014 GenBank
kpc Klebsiella pneumoniae subsp. pneumoniae KPNIH10 2015 GenBank
kpq Klebsiella pneumoniae subsp. pneumoniae KPR0928 2014 GenBank
kpt Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1 2014 GenBank
kpe Klebsiella pneumoniae 342 2008 GenBank
kpo Klebsiella pneumoniae KCTC 2242 2012 GenBank
kpr Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 2013 GenBank
kpj Klebsiella pneumoniae JM45 2013 GenBank
kpi Klebsiella pneumoniae CG43 2013 GenBank
kpa Klebsiella pneumoniae 30660/NJST258_1 2014 GenBank
kps Klebsiella pneumoniae 30684/NJST258_2 2014 GenBank
kpx Klebsiella pneumoniae PMK1 2014 GenBank
kpb Klebsiella pneumoniae blaNDM-1 2014 GenBank
kpne Klebsiella pneumoniae 32192 2015 GenBank
kpnu Klebsiella pneumoniae 34618 2015 GenBank
kpnk Klebsiella pneumoniae Kp52.145 2018 GenBank
kva Klebsiella variicola At-22 2010 GenBank
kvd Klebsiella variicola DX120E 2015 GenBank
kvq Klebsiella variicola DSM 15968 2015 GenBank
kox Klebsiella michiganensis KCTC 1686 2012 GenBank
koe Klebsiella michiganensis E718 2012 GenBank
koy Klebsiella michiganensis HKOPL1 2014 GenBank
kom Klebsiella michiganensis M1 2014 GenBank
kmi Klebsiella michiganensis RC10 2015 GenBank
kok Klebsiella oxytoca KONIH1 2014 GenBank
koc Klebsiella oxytoca CAV1374 2016 GenBank
kqu Klebsiella quasipneumoniae 2016 GenBank
eae Klebsiella aerogenes KCTC 2190 2011 RefSeq
ear Klebsiella aerogenes EA1509E 2013 GenBank
kqv Klebsiella quasivariicola 2017 GenBank
Citrobacter cko Citrobacter koseri 2007 GenBank
cro Citrobacter rodentium 2010 GenBank
cfd Citrobacter freundii 2014 GenBank
cbra Citrobacter braakii 2017 GenBank
cwe Citrobacter werkmanii 2017 GenBank
cyo Citrobacter youngae 2018 GenBank
cama Citrobacter amalonaticus Y19 2015 GenBank
caf Citrobacter amalonaticus FDAARGOS_165 2017 GenBank
cif Citrobacter sp. FDAARGOS_156 2016 GenBank
cfar Citrobacter farmeri 2017 GenBank
cir Citrobacter sp. CFNIH10 2018 GenBank
cie Citrobacter sp. CRE-46 2018 GenBank
Gibbsiella gqu Gibbsiella quercinecans 2017 GenBank
Blochmannia bfl Candidatus Blochmannia floridanus (Camponotus floridanus) 2003 GenBank
bpn Candidatus Blochmannia pennsylvanicus (Camponotus pennsylvanicus) 2005 GenBank
bva Candidatus Blochmannia vafer (Camponotus vafer) 2011 GenBank
bchr Candidatus Blochmannia chromaiodes (Camponotus chromaiodes) 2013 GenBank
ben Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 757 2015 GenBank
bed Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 675 2015 GenBank
Hamiltonella hde Candidatus Hamiltonella defensa (Acyrthosiphon pisum) 2009 GenBank
Unclassified aphid symbionts sect Secondary endosymbiont of Ctenarytaina eucalypti 2012 GenBank
sehc Secondary endosymbiont of Heteropsylla cubana 2012 GenBank
Unclassified mealybug symbionts senm Secondary endosymbiont of Trabutina mannipara 2016 GenBank
Riesia rip Candidatus Riesia pediculicola 2010 GenBank
rig Candidatus Riesia sp. GBBU 2017 GenBank
Moranella men Candidatus Moranella endobia PCIT 2011 GenBank
meo Candidatus Moranella endobia PCVAL 2013 GenBank
Shimwellia ebt Shimwellia blattae 2012 GenBank
Raoultella ror Raoultella ornithinolytica B6 2013 GenBank
ron Raoultella ornithinolytica S12 2015 GenBank
rpln Raoultella planticola 2018 GenBank
rao Raoultella sp. X13 2018 GenBank
Cedecea cnt Cedecea neteri SSMD04 2014 GenBank
cem Cedecea neteri 2014 GenBank
cen Cedecea neteri 2014 GenBank
Pluralibacter pge Pluralibacter gergoviae 2014 GenBank
esc Enterobacter lignolyticus SCF1 2010 GenBank
kle Enterobacter lignolyticus G5 2016 GenBank
Kosakonia ksa Kosakonia sacchari 2015 GenBank
kor Kosakonia oryzae 2016 GenBank
krd Kosakonia radicincitans 2016 GenBank
kco Kosakonia cowanii 2017 GenBank
Kluyvera kin Kluyvera intermedia 2015 GenBank
kgo Kluyvera georgiana 2017 GenBank
Ishikawaella icp Candidatus Ishikawaella capsulata 2016 GenBank
Leclercia lax Leclercia adecarboxylata 2016 GenBank
lei Leclercia sp. LSNIH1 2018 GenBank
leh Leclercia sp. LSNIH3 2018 GenBank
Lelliottia laz Lelliottia amnigena 2016 GenBank
lef Lelliottia jeotgali 2017 GenBank
lni Lelliottia nimipressuralis 2018 GenBank
lew Lelliottia sp. WB101 2018 GenBank
Limnobaculum lpv Limnobaculum parvum 2018 GenBank
Tachikawaea sbw Candidatus Tachikawaea gelatinosa 2015 GenBank
Doolittlea den Candidatus Doolittlea endobia 2016 GenBank
Hoaglandella hed Candidatus Hoaglandella endobia 2016 GenBank
Gullanella ged Candidatus Gullanella endobia 2016 GenBank
Mikella cmik Candidatus Mikella endobia 2016 GenBank
Purcelliella ppet Candidatus Purcelliella pentastirinorum 2018 GenBank
Unclassified Enterobacteria ebf Enterobacteriaceae bacterium FGI 57 2013 GenBank
ebc Enterobacteriaceae bacterium ENNIH2 2018 GenBank
psts Plautia stali symbiont 2014 GenBank
Yersinia ype Yersinia pestis CO92 (biovar Orientalis) 2001 RefSeq
ypk Yersinia pestis KIM10+ (biovar Mediaevalis) 2002 GenBank
yph Yersinia pestis Harbin 35 (biovar Medievalis) 2012 GenBank
ypa Yersinia pestis Antiqua (biovar Antiqua) 2006 GenBank
ypn Yersinia pestis Nepal516 (biovar Antiqua) 2006 GenBank
ypm Yersinia pestis 91001 (biovar Microtus) 2004 GenBank
ypp Yersinia pestis Pestoides F (biovar Antiqua) 2007 GenBank
ypg Yersinia pestis Angola 2007 GenBank
ypz Yersinia pestis Z176003 2010 GenBank
ypt Yersinia pestis A1122 2012 GenBank
ypd Yersinia pestis D106004 2012 GenBank
ypx Yersinia pestis D182038 2012 GenBank
ypw Yersinia pestis PBM19 2015 GenBank
ypj Yersinia pestis Harbin35 2015 GenBank
ypv Yersinia pestis Shasta 2015 GenBank
ypl Yersinia pestis El Dorado 2015 GenBank
yps Yersinia pseudotuberculosis IP 32953 (serotype I) 2004 GenBank
ypo Yersinia pseudotuberculosis IP 32953 (serotype 1) 2015 GenBank
ypi Yersinia pseudotuberculosis IP 31758 (serotype O:1b) 2007 GenBank
ypy Yersinia pseudotuberculosis YPIII 2008 GenBank
ypb Yersinia pseudotuberculosis PB1/+ 2008 GenBank
ypq Yersinia pseudotuberculosis ATCC 6904 2014 GenBank
ypu Yersinia pseudotuberculosis MD67 2015 GenBank
ypr Yersinia pseudotuberculosis EP2/+ 2015 GenBank
ypc Yersinia pseudotuberculosis 1 2015 GenBank
ypf Yersinia pseudotuberculosis PA3606 2015 GenBank
yen Yersinia enterocolitica subsp. enterocolitica 8081 2007 RefSeq
yep Yersinia enterocolitica subsp. palearctica 105.5R(r) 2011 GenBank
yey Yersinia enterocolitica subsp. palearctica Y11 2012 GenBank
yel Yersinia enterocolitica LC20 2014 GenBank
yew Yersinia enterocolitica WA 2015 GenBank
yet Yersinia enterocolitica 2516-87 2015 GenBank
yef Yersinia enterocolitica FORC_002 2015 GenBank
yee Yersinia enterocolitica (type O:5) YE53/03 2015 GenBank
ysi Yersinia similis 2014 GenBank
yal Yersinia aldovae 2015 GenBank
yfr Yersinia frederiksenii 2015 GenBank
yin Yersinia intermedia 2015 GenBank
ykr Yersinia kristensenii 2015 GenBank
yro Yersinia rohdei 2015 GenBank
yru Yersinia ruckeri YRB 2015 GenBank
yrb Yersinia ruckeri Big Creek 74 2015 GenBank
yak Yersinia aleksiciae 2015 GenBank
yma Yersinia massiliensis 2018 GenBank
Serratia spe Serratia proteamaculans 2007 GenBank
srr Serratia plymuthica AS9 2011 GenBank
srl Serratia plymuthica 4Rx13 2013 GenBank
sry Serratia plymuthica S13 2013 GenBank
sply Serratia plymuthica PRI-2C 2016 GenBank
srs Serratia sp. AS12 2011 GenBank
sra Serratia sp. AS13 2012 GenBank
ssz Serratia symbiotica 2012 GenBank
smaf Serratia sp. FGI94 2013 GenBank
smw Serratia marcescens WW4 2013 GenBank
smar Serratia marcescens SM39 2015 GenBank
smac Serratia marcescens subsp. marcescens Db11 2015 GenBank
slq Serratia liquefaciens 2013 GenBank
serf Serratia sp. FS14 2014 GenBank
sers Serratia sp. SCBI 2014 GenBank
sfw Serratia fonticola DSM 4576 2015 GenBank
sfg Serratia fonticola GS2 2017 GenBank
srz Serratia rubidaea 2016 GenBank
sera Serratia sp. ATCC 39006 2018 GenBank
serm Serratia sp. MYb239 2018 GenBank
Chania sfo Chania multitudinisentens 2014 GenBank
Rahnella rah Rahnella sp. Y9602 2011 GenBank
raq Rahnella aquatilis CIP 78.65 = ATCC 33071 2012 GenBank
raa Rahnella aquatilis HX2 2012 GenBank
Rouxiella rox Rouxiella sp. ERMR1:05 2018 GenBank
Pectobacterium eca Pectobacterium atrosepticum SCRI1043 2004 GenBank
patr Pectobacterium atrosepticum JG10-08 2014 GenBank
pato Pectobacterium atrosepticum 21A 2014 GenBank
pct Pectobacterium carotovorum subsp. carotovorum PC1 2009 GenBank
pcc Pectobacterium carotovorum subsp. carotovorum PCC21 2012 GenBank
pcv Pectobacterium carotovorum subsp. odoriferum 2014 GenBank
pwa Pectobacterium parmentieri WPP163 2009 GenBank
ppar Pectobacterium parmentieri RNS08.42.1A 2016 GenBank
pec Pectobacterium parmentieri SCC3193 2013 GenBank
pws Pectobacterium wasabiae 2016 GenBank
ppoa Pectobacterium polaris 2017 GenBank
Sodalis sgl Sodalis glossinidius (Glossina spp.) 2006 GenBank
sod Sodalis praecaptivus 2014 GenBank
pes Candidatus Sodalis pierantonius 2014 GenBank
seny Sodalis endosymbiont of Henestaris halophilus 2018 GenBank
Dickeya dda Dickeya paradisiaca 2009 GenBank
ddd Dickeya dadantii 3937 2010 GenBank
dze Dickeya chrysanthemi 2009 GenBank
ddc Dickeya zeae Ech586 2009 GenBank
dzc Dickeya zeae EC1 2015 GenBank
dso Dickeya solani IPO 2222 2016 GenBank
ced Dickeya solani ND14b 2014 GenBank
ddq Dickeya dianthicola 2017 GenBank
dfn Dickeya fangzhongdai 2018 GenBank
Brenneria bgj Brenneria goodwinii 2017 GenBank
Lonsdalea lbq Lonsdalea britannica 2018 GenBank
Erwinia eta Erwinia tasmaniensis 2008 GenBank
epy Erwinia pyrifoliae Ep1/96 2009 GenBank
epr Erwinia pyrifoliae DSM 12163 2012 GenBank
eam Erwinia amylovora CFBP1430 2010 GenBank
eay Erwinia amylovora ATCC 49946 2010 GenBank
ebi Erwinia billingiae 2010 GenBank
erj Erwinia sp. Ejp617 2012 GenBank
ege Erwinia gerundensis 2016 GenBank
epe Erwinia persicina 2018 GenBank
Buchnera buc Buchnera aphidicola APS (Acyrthosiphon pisum) 2000 RefSeq
bap Buchnera aphidicola 5A (Acyrthosiphon pisum) 2009 GenBank
bau Buchnera aphidicola Tuc7 (Acyrthosiphon pisum) 2009 GenBank
baw Buchnera aphidicola JF98 (Acyrthosiphon pisum) 2012 GenBank
bajc Buchnera aphidicola JF99 (Acyrthosiphon pisum) 2012 GenBank
bua Buchnera aphidicola LL01 (Acyrthosiphon pisum) 2012 GenBank
bup Buchnera aphidicola TLW03 (Acyrthosiphon pisum) 2012 GenBank
bak Buchnera aphidicola Ak (Acyrthosiphon kondoi) 2012 GenBank
buh Buchnera aphidicola Ua (Uroleucon ambrosiae) 2012 GenBank
bapf Buchnera aphidicola F009 (Myzus persicae) 2014 GenBank
bapg Buchnera aphidicola G002 (Myzus persicae) 2014 GenBank
bapu Buchnera aphidicola USDA (Myzus persicae) 2014 GenBank
bapw Buchnera aphidicola W106 (Myzus persicae) 2014 GenBank
bas Buchnera aphidicola Sg (Schizaphis graminum) 2002 GenBank
bab Buchnera aphidicola Bp (Baizongia pistaciae) 2003 GenBank
bcc Buchnera aphidicola BCc 2006 GenBank
baj Buchnera aphidicola (Cinara tujafilina) 2011 GenBank
baph Buchnera aphidicola (Aphis glycines) 2017 GenBank
Wigglesworthia wbr Wigglesworthia glossinidia brevipalpis (Glossina brevipalpis) 2002 GenBank
wgl Wigglesworthia glossinidia morsitans (Glossina morsitans) 2012 GenBank
Pantoea pam Pantoea ananatis LMG 20103 2010 GenBank
plf Pantoea ananatis LMG 5342 2012 GenBank
paj Pantoea ananatis AJ13355 2012 GenBank
paq Pantoea ananatis PA13 2012 GenBank
pva Pantoea vagans C9-1 2010 GenBank
pagg Pantoea vagans FDAARGOS_160 2016 GenBank
pao Pantoea sp. At-9b 2011 GenBank
kln Pantoea rwandensis 2014 GenBank
pant Pantoea sp. PSNIH1 2014 GenBank
panp Pantoea sp. PSNIH2 2015 GenBank
hhs Candidatus Pantoea carbekii 2013 GenBank
pck Candidatus Pantoea carbekii US 2015 GenBank
pagc Pantoea agglomerans C410P1 2017 GenBank
pstw Pantoea stewartii subsp. stewartii 2017 GenBank
palh Pantoea alhagi 2017 GenBank
pgz Pantoea gaviniae 2018 GenBank
pcd Pantoea calida 2018 GenBank
Tatumella tci Tatumella citrea 2017 GenBank
tpty Tatumella ptyseos 2018 GenBank
Photorhabdus plu Photorhabdus laumondii subsp. laumondii TTO1 2003 GenBank
plum Photorhabdus laumondii subsp. laumondii DSPV002N 2018 GenBank
pay Photorhabdus asymbiotica 2009 GenBank
ptt Photorhabdus thracensis 2015 GenBank
Proteus pmr Proteus mirabilis HI4320 2008 GenBank
pmib Proteus mirabilis BB2000 2013 GenBank
pvl Proteus mirabilis CYPV1 2016 GenBank
pvg Proteus vulgaris 2018 GenBank
Xenorhabdus xbo Xenorhabdus bovienii SS-2004 2010 GenBank
xbv Xenorhabdus bovienii CS03 2015 GenBank
xne Xenorhabdus nematophila ATCC 19061 2010 GenBank
xnm Xenorhabdus nematophila AN6/1 2015 GenBank
xdo Xenorhabdus doucetiae 2015 GenBank
xpo Xenorhabdus poinarii 2015 GenBank
xho Xenorhabdus hominickii 2016 GenBank
Providencia psi Providencia stuartii MRSN 2154 2012 GenBank
psx Providencia stuartii ATCC 33672 2014 GenBank
psta Providencia stuartii BE2467 2017 GenBank
prg Providencia rettgeri 2016 GenBank
pala Providencia alcalifaciens 2017 GenBank
phei Providencia heimbachae 2018 GenBank
Morganella mmk Morganella morganii 2013 GenBank
Arsenophonus asy Candidatus Arsenophonus lipoptenae 2016 GenBank
Edwardsiella eic Edwardsiella ictaluri 2009 GenBank
etr Edwardsiella tarda EIB202 2009 GenBank
etd Edwardsiella tarda FL6-60 2012 GenBank
ete Edwardsiella anguillarum 2014 GenBank
etc Edwardsiella piscicida C07-087 2013 GenBank
edw Edwardsiella sp. EA181011 2015 GenBank
edl Edwardsiella sp. LADL05-105 2015 GenBank
eho Edwardsiella hoshinae 2016 GenBank
Hafnia hav Hafnia alvei 2014 GenBank
Obesumbacterium opo Obesumbacterium proteus 2016 GenBank
Pragia pfq Pragia fontium 2015 GenBank
Leminorella lri Leminorella richardii 2018 GenBank
Plesiomonas pshi Plesiomonas shigelloides 2016 GenBank
Gammaproteobacteria - Others Haemophilus hin Haemophilus influenzae Rd KW20 (serotype d) 1995 RefSeq
hit Haemophilus influenzae 86-028NP (nontypeable) 2005 GenBank
hip Haemophilus influenzae PittEE (nontypeable) 2007 GenBank
hiq Haemophilus influenzae PittGG (nontypeable) 2007 GenBank
hif Haemophilus influenzae F3031 (nontypeable) 2011 GenBank
hil Haemophilus influenzae F3047 (nontypeable) 2011 GenBank
hiu Haemophilus influenzae 10810 (serotype b) 2012 GenBank
hie Haemophilus influenzae R2846 (nontypeable) 2012 GenBank
hiz Haemophilus influenzae R2866 (nontypeable) 2012 GenBank
hik Haemophilus influenzae KR494 (serotype f) 2013 GenBank
hia Haemophilus influenzae CGSHiCZ412602 2014 GenBank
hih Haemophilus influenzae Hi375 2014 GenBank
hiw Haemophilus influenzae 477 2015 GenBank
hic Haemophilus influenzae C486 2015 GenBank
hix Haemophilus influenzae 723 2015 GenBank
hpr Haemophilus parainfluenzae 2011 GenBank
hdu Haemophilus ducreyi 2003 GenBank
Glaesserella hap Glaesserella parasuis SH0165 2009 GenBank
hpaz Glaesserella parasuis ZJ0906 2013 GenBank
hpas Glaesserella parasuis SH03 2014 GenBank
hpak Glaesserella parasuis KL0318 2014 GenBank
Histophilus hso Histophilus somni 129PT 2006 GenBank
hsm Histophilus somni 2336 2008 GenBank
Pasteurella pmu Pasteurella multocida subsp. multocida Pm70 2001 GenBank
pmv Pasteurella multocida subsp. multocida HN06 2012 GenBank
pul Pasteurella multocida subsp. multocida 3480 2012 GenBank
pmp Pasteurella multocida 36950 2012 GenBank
pmul Pasteurella multocida ATCC 43137 2014 GenBank
pdag Pasteurella dagmatis 2018 GenBank
Basfia msu Mannheimia succiniciproducens 2004 GenBank
Mannheimia mht Mannheimia haemolytica USDA-ARS-USMARC-185 2013 GenBank
mhq Mannheimia haemolytica USDA-ARS-USMARC-183 2013 GenBank
mhat Mannheimia haemolytica USDA-ARS-USMARC-184 2015 GenBank
mhx Mannheimia haemolytica M42548 2013 GenBank
mhae Mannheimia haemolytica D153 2013 GenBank
mham Mannheimia haemolytica D171 2013 GenBank
mhao Mannheimia haemolytica D174 2013 GenBank
mhal Mannheimia haemolytica USMARC_2286 2013 GenBank
mhaq Mannheimia haemolytica 89010807N 2015 GenBank
mhay Mannheimia haemolytica 89010807N lktA- 2015 GenBank
mvr Mannheimia sp. USDA-ARS-USMARC-1261 2014 GenBank
mvi Mannheimia varigena USDA-ARS-USMARC-1296 2014 GenBank
mvg Mannheimia varigena USDA-ARS-USMARC-1312 2014 GenBank
mve Mannheimia varigena USDA-ARS-USMARC-1388 2014 GenBank
Actinobacillus apl Actinobacillus pleuropneumoniae L20 (serotype 5b) 2007 GenBank
apj Actinobacillus pleuropneumoniae JL03 (serotype 3) 2008 GenBank
apa Actinobacillus pleuropneumoniae AP76 (serotype 7) 2008 GenBank
asu Actinobacillus succinogenes 2007 GenBank
asi Actinobacillus suis H91-0380 2012 GenBank
ass Actinobacillus suis ATCC 33415 2014 GenBank
aeu Actinobacillus equuli 2014 GenBank
apor Actinobacillus porcitonsillarum 2018 GenBank
Aggregatibacter aap Aggregatibacter aphrophilus NJ8700 2009 GenBank
aaz Aggregatibacter aphrophilus W10433 2016 GenBank
aat Aggregatibacter actinomycetemcomitans D11S-1 2009 GenBank
aao Aggregatibacter actinomycetemcomitans ANH9381 2012 GenBank
aan Aggregatibacter actinomycetemcomitans D7S-1 2012 GenBank
aah Aggregatibacter actinomycetemcomitans HK1651 2014 GenBank
aacn Aggregatibacter actinomycetemcomitans NUM4039 2016 GenBank
aact Aggregatibacter actinomycetemcomitans 624 2017 GenBank
Gallibacterium gan Gallibacterium anatis 2011 GenBank
Bibersteinia bto Bibersteinia trehalosi USDA-ARS-USMARC-192 2013 GenBank
btre Bibersteinia trehalosi USDA-ARS-USMARC-188 2014 GenBank
btrh Bibersteinia trehalosi USDA-ARS-USMARC-189 2014 GenBank
btra Bibersteinia trehalosi USDA-ARS-USMARC-190 2014 GenBank
Xylella xfa Xylella fastidiosa 9a5c 2000 GenBank
xft Xylella fastidiosa Temecula1 2003 GenBank
xfm Xylella fastidiosa M12 2008 GenBank
xfn Xylella fastidiosa M23 2008 GenBank
xff Xylella fastidiosa subsp. fastidiosa GB514 2012 GenBank
xfl Xylella fastidiosa MUL0034 2014 GenBank
xfs Xylella fastidiosa subsp. sandyi Ann-1 2014 GenBank
xfh Xylella fastidiosa Hib4 2017 GenBank
xtw Xylella taiwanensis 2018 GenBank
Xanthomonas xcc Xanthomonas campestris pv. campestris ATCC 33913 2002 RefSeq
xcb Xanthomonas campestris pv. campestris 8004 2005 GenBank
xca Xanthomonas campestris pv. campestris B100 2008 GenBank
xcp Xanthomonas campestris pv. raphani 2012 GenBank
xcv Xanthomonas campestris pv. vesicatoria 2005 GenBank
xax Xanthomonas axonopodis pv. citrumelo F1 2011 GenBank
xac Xanthomonas citri pv. citri 306 2002 GenBank
xci Xanthomonas citri subsp. citri Aw12879 2013 GenBank
xct Xanthomonas citri subsp. citri A306 2015 GenBank
xcj Xanthomonas citri subsp. citri UI6 2015 GenBank
xcu Xanthomonas citri pv. citri UI7 2015 GenBank
xcn Xanthomonas citri pv. citri NT17 2015 GenBank
xcw Xanthomonas citri pv. citri MN10 2015 GenBank
xcr Xanthomonas citri pv. citri MN11 2015 GenBank
xcm Xanthomonas citri pv. citri MN12 2015 GenBank
xcf Xanthomonas citri pv. citri mf20 2015 GenBank
xfu Xanthomonas citri pv. fuscans 2014 GenBank
xao Xanthomonas axonopodis Xac29-1 2013 GenBank
xoo Xanthomonas oryzae pv. oryzae KACC 10331 2005 GenBank
xom Xanthomonas oryzae pv. oryzae MAFF 311018 2006 GenBank
xop Xanthomonas oryzae pv. oryzae PXO99A 2008 GenBank
xoy Xanthomonas oryzae pv. oryzae PXO86 2015 GenBank
xor Xanthomonas oryzae pv. oryzicola BLS256 2012 GenBank
xoz Xanthomonas oryzae pv. oryzicola CFBP7342 2015 GenBank
xal Xanthomonas albilineans 2010 GenBank
xsa Xanthomonas sacchari 2015 GenBank
xtn Xanthomonas translucens 2015 GenBank
xfr Xanthomonas fragariae 2017 GenBank
xga Xanthomonas gardneri 2017 GenBank
xve Xanthomonas vesicatoria 2017 GenBank
xpe Xanthomonas perforans 2017 GenBank
xhr Xanthomonas hortorum 2017 GenBank
xph Xanthomonas phaseoli 2017 GenBank
xva Xanthomonas vasicola 2018 GenBank
Stenotrophomonas sml Stenotrophomonas maltophilia K279a 2008 GenBank
smt Stenotrophomonas maltophilia R551-3 2008 GenBank
buj Stenotrophomonas maltophilia JV3 2011 GenBank
smz Stenotrophomonas maltophilia D457 2012 GenBank
sacz Stenotrophomonas acidaminiphila 2016 GenBank
stek Stenotrophomonas sp. KCTC 12332 2016 GenBank
srh Stenotrophomonas rhizophila 2016 GenBank
slm Stenotrophomonas sp. LM091 2017 GenBank
sten Stenotrophomonas sp. WZN-1 2017 GenBank
stem Stenotrophomonas sp. MYb57 2018 GenBank
Pseudoxanthomonas psu Pseudoxanthomonas suwonensis 11-1 2011 GenBank
psuw Pseudoxanthomonas suwonensis J1 2016 GenBank
psd Pseudoxanthomonas spadix 2011 GenBank
Lysobacter lab Lysobacter antibioticus 76 2016 GenBank
laq Lysobacter antibioticus ATCC 29479 2016 GenBank
lcp Lysobacter capsici 2016 GenBank
lgu Lysobacter gummosus 2016 GenBank
lez Lysobacter enzymogenes C3 2016 GenBank
lem Lysobacter enzymogenes M497-1 2017 GenBank
lmb Lysobacter maris 2018 GenBank
lyt Lysobacter sp. TY2-98 2018 GenBank
Luteimonas lum Luteimonas sp. 100111 2017 GenBank
lue Luteimonas sp. 83-4 2018 GenBank
Frateuria fau Frateuria aurantia 2012 GenBank
Rhodanobacter rhd Rhodanobacter denitrificans 2013 GenBank
Dyella dji Dyella jiangningensis 2014 GenBank
dja Dyella japonica 2014 GenBank
dtx Dyella thiooxydans 2016 GenBank
Dokdonella dko Dokdonella koreensis 2016 GenBank
Luteibacter lrz Luteibacter rhizovicinus DSM 16549 2016 GenBank
Ahniella xba Ahniella affigens 2018 GenBank
Vibrio vch Vibrio cholerae O1 El Tor N16961 2000 RefSeq
vcf Vibrio cholerae O1 El Tor FJ147 2015 GenBank
vcs Vibrio cholerae O1 El Tor MS6 2015 GenBank
vce Vibrio cholerae O1 2010EL-1786 2011 GenBank
vcq Vibrio cholerae O1 2012EL-2176 2014 GenBank
vcj Vibrio cholerae O1 MJ-1236 2009 GenBank
vci Vibrio cholerae O1 IEC224 2012 GenBank
vco Vibrio cholerae O1 O395 2007 GenBank
vcr Vibrio cholerae O1 O395 2012 GenBank
vcm Vibrio cholerae O1 M66-2 2009 GenBank
vcl Vibrio cholerae O1 LMA3984-4 2012 GenBank
vcx Vibrio cholerae O49 1154-74 2015 GenBank
vcz Vibrio cholerae O27 10432-62 2015 GenBank
vvu Vibrio vulnificus CMCP6 2002 GenBank
vvy Vibrio vulnificus YJ016 2003 GenBank
vvm Vibrio vulnificus MO6-24/O 2011 GenBank
vvl Vibrio vulnificus 93U204 2014 GenBank
vpa Vibrio parahaemolyticus RIMD 2210633 2003 RefSeq
vpb Vibrio parahaemolyticus BB22OP 2013 GenBank
vpk Vibrio parahaemolyticus O1:K33 CDC_K4557 2013 GenBank
vpf Vibrio parahaemolyticus O1:Kuk FDA_R31 2013 GenBank
vph Vibrio parahaemolyticus UCM-V493 2014 GenBank
vha Vibrio campbellii 2007 GenBank
vca Vibrio campbellii 2013 GenBank
vag Vibrio alginolyticus 2013 GenBank
vex Vibrio antiquarius 2009 GenBank
vdb Vibrio diabolicus 2018 GenBank
vhr Vibrio harveyi 2016 GenBank
vna Vibrio natriegens 2017 GenBank
vow Vibrio owensii 2017 GenBank
vro Vibrio rotiferianus 2017 GenBank
vsp Vibrio tasmaniensis 2008 GenBank
vej Vibrio sp. EJY3 2012 GenBank
vfu Vibrio furnissii 2012 GenBank
vni Vibrio nigripulchritudo 2013 GenBank
van Vibrio anguillarum 775 2011 GenBank
lag Vibrio anguillarum M3 2013 GenBank
vau Vibrio anguillarum NB10 2015 GenBank
vcy Vibrio coralliilyticus RE98 2014 GenBank
vct Vibrio coralliilyticus OCN014 2014 GenBank
vtu Vibrio tubiashii 2014 GenBank
vfl Vibrio fluvialis 2016 GenBank
vmi Vibrio mimicus 2016 GenBank
vbr Vibrio breoganii 2017 GenBank
vsc Vibrio scophthalmi 2017 GenBank
vga Vibrio gazogenes 2017 GenBank
vsh Vibrio shilonii 2017 GenBank
vqi Vibrio qinghaiensis 2018 GenBank
vta Vibrio tapetis 2018 GenBank
Aliivibrio vfi Aliivibrio fischeri ES114 2005 RefSeq
vfm Aliivibrio fischeri MJ11 2008 GenBank
vsa Aliivibrio salmonicida 2008 GenBank
awd Aliivibrio wodanis 2015 GenBank
Photobacterium ppr Photobacterium profundum 2004 GenBank
pgb Photobacterium gaetbulicola 2015 GenBank
pds Photobacterium damselae subsp. damselae 2017 GenBank
Grimontia gho Grimontia hollisae 2016 GenBank
Paraphotobacterium pmai Paraphotobacterium marinum 2017 GenBank
Pseudomonas pae Pseudomonas aeruginosa PAO1 2000 RefSeq
paev Pseudomonas aeruginosa PAO1-VE13 2014 GenBank
paei Pseudomonas aeruginosa PAO1-VE2 2014 GenBank
pau Pseudomonas aeruginosa UCBPP-PA14 2006 GenBank
pap Pseudomonas aeruginosa PA7 2007 GenBank
pag Pseudomonas aeruginosa LESB58 2009 GenBank
paf Pseudomonas aeruginosa M18 2012 GenBank
pnc Pseudomonas aeruginosa NCGM2.S1 2012 GenBank
paeb Pseudomonas aeruginosa NCGM 1900 2015 GenBank
pdk Pseudomonas aeruginosa DK2 2012 GenBank
psg Pseudomonas aeruginosa B136-33 2013 GenBank
prp Pseudomonas aeruginosa RP73 2013 GenBank
paep Pseudomonas aeruginosa PA1 2013 GenBank
paer Pseudomonas aeruginosa PA1R 2013 GenBank
paem Pseudomonas aeruginosa MTB-1 2013 GenBank
pael Pseudomonas aeruginosa LES431 2013 GenBank
paes Pseudomonas aeruginosa SCV20265 2013 GenBank
paeu Pseudomonas aeruginosa PA38182 2014 GenBank
paeg Pseudomonas aeruginosa YL84 2014 GenBank
paec Pseudomonas aeruginosa c7447m 2014 GenBank
paeo Pseudomonas aeruginosa PAO581 2014 GenBank
pmy Pseudomonas mendocina ymp 2007 GenBank
pmk Pseudomonas mendocina NK-01 2011 GenBank
pre Pseudomonas resinovorans 2013 GenBank
ppse Pseudomonas pseudoalcaligenes 2015 GenBank
palc Pseudomonas alcaligenes 2016 GenBank
pcq Pseudomonas citronellolis 2017 GenBank
ppu Pseudomonas putida KT2440 2003 RefSeq
ppf Pseudomonas putida F1 2007 GenBank
ppg Pseudomonas putida GB-1 2008 GenBank
ppw Pseudomonas putida W619 2008 GenBank
ppt Pseudomonas putida S16 2011 GenBank
ppb Pseudomonas putida BIRD-1 2012 GenBank
ppi Pseudomonas putida ND6 2012 GenBank
ppx Pseudomonas putida DOT-T1E 2012 GenBank
ppuh Pseudomonas putida HB3267 2012 GenBank
pput Pseudomonas putida H8234 2013 GenBank
ppun Pseudomonas putida NBRC 14164 2013 GenBank
ppud Pseudomonas putida DLL-E4 2014 GenBank
pfv Pseudomonas fulva 2011 GenBank
pmon Pseudomonas monteilii SB3078 2013 GenBank
pmot Pseudomonas monteilii SB3101 2013 GenBank
pmos Pseudomonas mosselii 2014 GenBank
ppj Pseudomonas plecoglossicida 2015 GenBank
por Pseudomonas oryzihabitans 2016 GenBank
pst Pseudomonas syringae pv. tomato DC3000 2003 RefSeq
psb Pseudomonas syringae pv. syringae B728a 2005 RefSeq
psyr Pseudomonas syringae CC1557 2014 GenBank
psp Pseudomonas savastanoi pv. phaseolicola 1448A 2005 GenBank
pamg Pseudomonas amygdali 2018 GenBank
pci Pseudomonas cichorii 2014 GenBank
pavl Pseudomonas avellanae 2018 GenBank
pfl Pseudomonas protegens Pf-5 2005 GenBank
pprc Pseudomonas protegens CHA0 2013 GenBank
ppro Pseudomonas protegens Cab57 2015 GenBank
pfo Pseudomonas fluorescens Pf0-1 2005 GenBank
pfs Pseudomonas fluorescens SBW25 2009 GenBank
pfe Pseudomonas fluorescens F113 2012 GenBank
pfc Pseudomonas fluorescens A506 2012 GenBank
pfn Pseudomonas fluorescens UK4 2014 GenBank
pfw Pseudomonas fluorescens PCL1751 2015 GenBank
pff Pseudomonas fluorescens PICF7 2015 GenBank
pfx Pseudomonas fluorescens L228 2017 GenBank
ppz Pseudomonas poae 2013 GenBank
pfb Pseudomonas synxantha LBUM223 2015 GenBank
pman Pseudomonas mandelii 2015 GenBank
ptv Pseudomonas trivialis 2015 GenBank
pcg Pseudomonas corrugata 2017 GenBank
pvr Pseudomonas veronii 2017 GenBank
pazo Pseudomonas azotoformans 2017 GenBank
poi Pseudomonas orientalis 2018 GenBank
pen Pseudomonas entomophila 2006 GenBank
psa Pseudomonas stutzeri A1501 2007 GenBank
psz Pseudomonas stutzeri ATCC 17588 2011 GenBank
psr Pseudomonas stutzeri DSM 4166 2012 GenBank
psc Pseudomonas stutzeri CCUG 29243 2012 GenBank
psj Pseudomonas stutzeri DSM 10701 2012 GenBank
psh Pseudomonas stutzeri RCH2 2012 GenBank
pstu Pseudomonas stutzeri 19SMN4 2014 GenBank
pstt Pseudomonas stutzeri 28a24 2014 GenBank
pbm Pseudomonas balearica 2015 GenBank
pba Pseudomonas brassicacearum subsp. brassicacearum NFM421 2011 GenBank
pbc Pseudomonas brassicacearum DF41 2014 GenBank
ppuu Pseudomonas sp. UW4 2012 GenBank
pdr Pseudomonas sp. ATCC 13867 2013 GenBank
psv Pseudomonas sp. VLB120 2013 GenBank
psk Pseudomonas sp. TKP 2013 GenBank
pkc Pseudomonas knackmussii 2014 GenBank
pch Pseudomonas chlororaphis PA23 2014 GenBank
pcz Pseudomonas chlororaphis PCL1606 2015 GenBank
pcp Pseudomonas chlororaphis subsp. aurantiaca 2014 GenBank
pfz Pseudomonas fragi 2016 GenBank
plq Pseudomonas lundensis 2018 GenBank
palk Pseudomonas alkylphenolica 2014 GenBank
prh Pseudomonas rhizosphaerae 2014 GenBank
psw Pseudomonas cremoricolorata 2014 GenBank
ppv Pseudomonas parafulva 2015 GenBank
pses Pseudomonas sp. StFLB209 2015 GenBank
psem Pseudomonas sp. MRSN12121 2015 GenBank
psec Pseudomonas sp. CCOS 191 2015 GenBank
ppsy Pseudomonas versuta 2016 GenBank
psos Pseudomonas sp. Os17 2016 GenBank
pkr Pseudomonas koreensis 2017 GenBank
pfk Pseudomonas frederiksbergensis 2017 GenBank
panr Pseudomonas antarctica 2017 GenBank
ppsl Pseudomonas psychrotolerans 2017 GenBank
pset Pseudomonas sp. TCU-HL1 2018 GenBank
psil Pseudomonas silesiensis 2018 GenBank
Azotobacter avn Azotobacter vinelandii DJ 2009 GenBank
avl Azotobacter vinelandii CA 2013 GenBank
avd Azotobacter vinelandii CA6 2013 GenBank
acx Azotobacter chroococcum 2015 GenBank
Oblitimonas pbb Oblitimonas alkaliphila 2016 GenBank
Psychrobacter par Psychrobacter arcticus 2005 GenBank
pcr Psychrobacter cryohalolentis 2006 GenBank
prw Psychrobacter sp. PRwf-1 2007 GenBank
pso Psychrobacter sp. G 2013 GenBank
pur Psychrobacter urativorans 2016 GenBank
pali Psychrobacter alimentarius 2016 GenBank
pspg Psychrobacter sp. P2G3 2016 GenBank
psyg Psychrobacter sp. P11G5 2016 GenBank
psyc Psychrobacter sp. DAB_AL43B 2017 GenBank
psya Psychrobacter sp. AntiMn-1 2017 GenBank
psyy Psychrobacter sp. YP14 2018 GenBank
Acinetobacter acb Acinetobacter baumannii ATCC 17978 2007 GenBank
abm Acinetobacter baumannii SDF 2008 GenBank
aby Acinetobacter baumannii AYE 2008 GenBank
abc Acinetobacter baumannii ACICU 2008 GenBank
abn Acinetobacter baumannii AB0057 2008 GenBank
abb Acinetobacter baumannii AB307-0294 2008 GenBank
abx Acinetobacter baumannii 1656-2 2012 GenBank
abz Acinetobacter baumannii MDR-ZJ06 2012 GenBank
abr Acinetobacter baumannii MDR-TJ 2012 GenBank
abd Acinetobacter baumannii TCDC-AB0715 2012 GenBank
abh Acinetobacter baumannii TYTH-1 2012 GenBank
abad Acinetobacter baumannii D1279779 2013 GenBank
abj Acinetobacter baumannii BJAB07104 2013 GenBank
abab Acinetobacter baumannii BJAB0715 2013 GenBank
abaj Acinetobacter baumannii BJAB0868 2013 GenBank
abaz Acinetobacter baumannii ZW85-1 2013 GenBank
abk Acinetobacter baumannii AbH12O-A2 2014 GenBank
abau Acinetobacter baumannii AB030 2014 GenBank
abaa Acinetobacter baumannii AB031 2014 GenBank
abw Acinetobacter baumannii AC29 2014 GenBank
abal Acinetobacter baumannii LAC-4 2015 GenBank
acc Acinetobacter pittii 2012 RefSeq
ano Acinetobacter nosocomialis 2016 GenBank
alc Acinetobacter lactucae 2017 GenBank
acal Acinetobacter calcoaceticus 2018 GenBank
acd Acinetobacter oleivorans 2010 GenBank
aci Acinetobacter sp. ADP1 2004 GenBank
att Acinetobacter sp. TTH0-4 2016 GenBank
aei Acinetobacter equi 2016 GenBank
ajo Acinetobacter johnsonii 2016 GenBank
acw Acinetobacter sp. DUT-2 2016 GenBank
acv Acinetobacter sp. TGL-Y2 2016 GenBank
ahl Acinetobacter haemolyticus 2017 GenBank
ajn Acinetobacter junii 2017 GenBank
asol Acinetobacter soli 2017 GenBank
ala Acinetobacter larvae 2017 GenBank
asj Acinetobacter schindleri 2017 GenBank
aid Acinetobacter indicus 2018 GenBank
adv Acinetobacter defluvii 2018 GenBank
arj Acinetobacter radioresistens 2018 GenBank
Moraxella mct Moraxella catarrhalis BBH18 2010 GenBank
mcs Moraxella catarrhalis 25240 2014 GenBank
mcat Moraxella catarrhalis 25239 2014 GenBank
moi Moraxella ovis 2016 GenBank
mos Moraxella osloensis 2016 GenBank
mbl Moraxella bovoculi 2016 GenBank
mboi Moraxella bovis 2018 GenBank
Unclassified Moraxellaceae mbah Moraxellaceae bacterium HYN0046 2018 GenBank
Shewanella son Shewanella oneidensis 2002 RefSeq
sdn Shewanella denitrificans 2006 GenBank
sfr Shewanella frigidimarina 2006 GenBank
saz Shewanella amazonensis 2006 GenBank
sbl Shewanella baltica OS155 2007 GenBank
sbm Shewanella baltica OS185 2007 GenBank
sbn Shewanella baltica OS195 2007 GenBank
sbp Shewanella baltica OS223 2008 GenBank
sbt Shewanella baltica OS678 2012 GenBank
sbs Shewanella baltica OS117 2012 GenBank
sbb Shewanella baltica BA175 2012 GenBank
slo Shewanella loihica 2007 GenBank
spc Shewanella putrefaciens CN-32 2007 GenBank
shp Shewanella putrefaciens 200 2012 GenBank
sse Shewanella sediminis 2007 GenBank
spl Shewanella pealeana 2007 GenBank
she Shewanella sp. MR-4 2006 GenBank
shm Shewanella sp. MR-7 2006 GenBank
shn Shewanella sp. ANA-3 2006 GenBank
shw Shewanella sp. W3-18-1 2007 GenBank
shl Shewanella halifaxensis 2008 GenBank
swd Shewanella woodyi 2008 GenBank
swp Shewanella piezotolerans 2008 GenBank
svo Shewanella violacea 2010 GenBank
shf Shewanella sp. FDAARGOS_354 2017 GenBank
sja Shewanella japonica 2017 GenBank
spsw Shewanella psychrophila 2017 GenBank
sbj Shewanella bicestrii 2017 GenBank
smav Shewanella marisflavi 2018 GenBank
shew Shewanella sp. WE21 2018 GenBank
salg Shewanella algae 2018 GenBank
Idiomarina ilo Idiomarina loihiensis L2TR 2004 GenBank
ili Idiomarina loihiensis GSL 199 2013 GenBank
ipi Idiomarina piscisalsi 2017 GenBank
idi Idiomarina sp. X4 2017 GenBank
idt Idiomarina sp. OT37-5b 2018 GenBank
Colwellia cps Colwellia psychrerythraea 2005 RefSeq
com Colwellia sp. MT41 2016 GenBank
coz Colwellia sp. PAMC 20917 2016 GenBank
colw Colwellia sp. PAMC 21821 2017 GenBank
cola Colwellia sp. Arc7-D 2018 GenBank
Pseudoalteromonas pha Pseudoalteromonas haloplanktis 2005 GenBank
pat Pseudoalteromonas atlantica 2006 GenBank
psm Pseudoalteromonas sp. SM9913 2010 GenBank
pseo Pseudoalteromonas piratica OCN003 2015 GenBank
pia Pseudoalteromonas issachenkonii 2016 GenBank
pphe Pseudoalteromonas phenolica 2016 GenBank
pbw Pseudoalteromonas sp. Bsw20308 2016 GenBank
prr Pseudoalteromonas rubra 2016 GenBank
ptn Pseudoalteromonas translucida 2016 GenBank
plz Pseudoalteromonas luteoviolacea 2016 GenBank
paln Pseudoalteromonas aliena 2017 GenBank
ppis Pseudoalteromonas piscicida 2017 GenBank
pea Pseudoalteromonas espejiana 2017 GenBank
pspo Pseudoalteromonas spongiae 2017 GenBank
part Pseudoalteromonas arctica 2017 GenBank
ptu Pseudoalteromonas tunicata 2017 GenBank
png Pseudoalteromonas nigrifaciens 2018 GenBank
ptd Pseudoalteromonas tetraodonis 2018 GenBank
psen Pseudoalteromonas sp. NC201 2018 GenBank
Marinobacter maq Marinobacter hydrocarbonoclasticus VT8 2007 GenBank
mhc Marinobacter hydrocarbonoclasticus ATCC 49840 2012 GenBank
mad Marinobacter adhaerens 2012 GenBank
mbs Marinobacter sp. BSs20148 2012 GenBank
msr Marinobacter salarius 2015 GenBank
msx Marinobacter similis 2015 GenBank
mpq Marinobacter psychrophilus 2015 GenBank
mari Marinobacter sp. CP1 2015 GenBank
mlq Marinobacter sp. LQ44 2016 GenBank
msq Marinobacter salinus 2017 GenBank
mara Marinobacter sp. Arc7-DN-1 2018 GenBank
Alteromonas amc Alteromonas mediterranea DE 2008 GenBank
amh Alteromonas mediterranea 615 2013 GenBank
amaa Alteromonas mediterranea DE1 2012 GenBank
amal Alteromonas mediterranea U4 2013 GenBank
amae Alteromonas mediterranea U7 2013 GenBank
amao Alteromonas mediterranea U8 2013 GenBank
amad Alteromonas mediterranea UM4b 2013 GenBank
amai Alteromonas mediterranea UM7 2013 GenBank
amag Alteromonas mediterranea MED64 2013 GenBank
amac Alteromonas macleodii ATCC 27126 2012 GenBank
amb Alteromonas macleodii Balearic Sea AD45 2012 GenBank
amg Alteromonas macleodii English Channel 673 2012 GenBank
amk Alteromonas macleodii Black Sea 11 2012 GenBank
alt Alteromonas naphthalenivorans 2011 GenBank
aal Alteromonas australica H 17 2014 GenBank
aaus Alteromonas australica DE170 2015 GenBank
asp Alteromonas stellipolaris LMG 21856 2016 GenBank
asq Alteromonas stellipolaris LMG 21861 2016 GenBank
aaw Alteromonas addita 2016 GenBank
Glaciecola gag Glaciecola sp. 4H-3-7+YE-5 2011 GenBank
gni Glaciecola nitratireducens 2011 GenBank
Paraglaciecola gps Paraglaciecola psychrophila 2013 GenBank
Lacimicrobium lal Lacimicrobium alkaliphilum 2016 GenBank
Catenovulum cate Catenovulum sp. CCB-QB4 2018 GenBank
Salinimonas salh Salinimonas sp. HMF8227 2018 GenBank
salm Salinimonas sp. N102 2018 GenBank
Psychromonas pin Psychromonas ingrahamii 2006 GenBank
psy Psychromonas sp. CNPT3 2013 GenBank
Ferrimonas fbl Ferrimonas balearica 2010 GenBank
Moritella mvs Moritella viscosa 2015 GenBank
mya Moritella yayanosii 2018 GenBank
Cellvibrio cja Cellvibrio japonicus 2008 GenBank
ceb Cellvibrio sp. PSBB023 2017 GenBank
cell Cellvibrio sp. PSBB006 2017 GenBank
Saccharophagus sde Saccharophagus degradans 2006 GenBank
Teredinibacter ttu Teredinibacter turnerae 2009 GenBank
Simiduia saga Simiduia agarivorans 2012 GenBank
Spongiibacter spoi Spongiibacter sp. IMCC21906 2015 GenBank
Zhongshania zal Zhongshania aliphaticivorans 2016 GenBank
Oceanicoccus osg Oceanicoccus sagamiensis 2017 GenBank
Microbulbifer mthd Microbulbifer thermotolerans 2016 GenBank
micc Microbulbifer aggregans 2016 GenBank
maga Microbulbifer agarilyticus 2017 GenBank
mii Microbulbifer sp. A4B17 2018 GenBank
Halioglobus hja Halioglobus japonicus 2017 GenBank
Coxiella cbu Coxiella burnetii RSA 493 2003 RefSeq
cbs Coxiella burnetii RSA 331 2007 GenBank
cbd Coxiella burnetii Dugway 5J108-111 2007 GenBank
cbg Coxiella burnetii CbuG_Q212 2008 GenBank
cbc Coxiella burnetii CbuK_Q154 2008 GenBank
cea Coxiella endosymbiont of Amblyomma americanum 2015 GenBank
Unclassified Coxiellaceae cey Coxiella-like endosymbiont 2015 GenBank
Legionella lpn Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1) 2004 RefSeq
lph Legionella pneumophila subsp. pneumophila HL06041035 (serogroup 1) 2012 GenBank
lpo Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1) 2012 GenBank
lpu Legionella pneumophila subsp. pneumophila LPE509 2013 GenBank
lpm Legionella pneumophila subsp. pneumophila Thunder Bay 2013 GenBank
lpf Legionella pneumophila Lens (serogroup 1) 2004 GenBank
lpp Legionella pneumophila Paris (serogroup 1) 2004 GenBank
lpc Legionella pneumophila Corby 2007 GenBank
lpa Legionella pneumophila 2300/99 Alcoy (serogroup 1) 2010 GenBank
lpe Legionella pneumophila subsp. pneumophila ATCC 43290 (serogroup 12) 2012 GenBank
llo Legionella longbeachae 2010 GenBank
lfa Legionella fallonii 2015 GenBank
lha Legionella hackeliae 2015 GenBank
lok Legionella oakridgensis 2015 GenBank
lcd Legionella clemsonensis 2017 GenBank
les Legionella endosymbiont of Polyplax serrata 2017 GenBank
lsh Legionella sainthelensi 2018 GenBank
llg Legionella lansingensis 2018 GenBank
Tatlockia tmc Tatlockia micdadei 2015 GenBank
Methylococcus mca Methylococcus capsulatus 2004 GenBank
Methylomonas mmt Methylomonas methanica 2011 GenBank
mdn Methylomonas denitrificans 2016 GenBank
mdh Methylomonas sp. DH-1 2016 GenBank
mko Methylomonas koyamae 2017 GenBank
Methylomicrobium mah Methylomicrobium alcaliphilum 2011 GenBank
Methylovulum mpsy Methylovulum psychrotolerans 2017 GenBank
Francisella ftu Francisella tularensis subsp. tularensis SCHU S4 2004 RefSeq
ftq Francisella tularensis subsp. tularensis SCHU S4 NR-28534 2015 GenBank
ftf Francisella tularensis subsp. tularensis FSC198 2006 GenBank
ftw Francisella tularensis subsp. tularensis WY96-3418 2007 GenBank
ftr Francisella tularensis subsp. tularensis NE061598 2012 GenBank
ftt Francisella tularensis subsp. tularensis TI0902 2012 GenBank
ftg Francisella tularensis subsp. tularensis TIGB03 2012 GenBank
ftl Francisella tularensis subsp. holarctica LVS 2006 GenBank
fth Francisella tularensis subsp. holarctica OSU18 2006 GenBank
fta Francisella tularensis subsp. holarctica FTNF002-00 2007 GenBank
fts Francisella tularensis subsp. holarctica F92 2012 GenBank
fti Francisella tularensis subsp. holarctica FSC200 2012 GenBank
fto Francisella tularensis subsp. holarctica PHIT-FT049 2014 GenBank
ftc Francisella tularensis subsp. holarctica FTT_1 2015 GenBank
ftv Francisella tularensis subsp. holarctica VT68 2015 GenBank
ftz Francisella tularensis subsp. holarctica 425 2015 GenBank
ftm Francisella tularensis subsp. mediasiatica FSC147 2008 GenBank
ftn Francisella tularensis subsp. novicida U112 2006 GenBank
ftx Francisella tularensis subsp. novicida U112 2015 GenBank
ftd Francisella tularensis subsp. novicida F6168 2015 GenBank
fty Francisella tularensis subsp. novicida DPG 3A-IS 2015 GenBank
fcf Francisella cf. novicida Fx1 2012 GenBank
fcn Francisella cf. tularensis subsp. novicida 3523 2012 GenBank
fph Francisella philomiragia subsp. philomiragia ATCC 25017 2008 GenBank
fpt Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L 2015 GenBank
fpi Francisella philomiragia O#319-029 2015 GenBank
fpm Francisella philomiragia O#319-036 2015 GenBank
fpx Francisella philomiragia O#319-067 2015 GenBank
fpz Francisella philomiragia GA01-2794 2015 GenBank
fpj Francisella philomiragia GA01-2801 2015 GenBank
frt Francisella sp. TX077308 2011 GenBank
fna Francisella noatunensis subsp. orientalis Toba 04 2012 GenBank
fnl Francisella noatunensis subsp. orientalis LADL--07-285A 2013 GenBank
frf Francisella sp. FSC1006 2014 GenBank
fper Francisella persica 2016 GenBank
fhi Francisella hispaniensis 2017 GenBank
fha Francisella halioticida 2017 GenBank
frx Francisella sp. TX077310 2017 GenBank
frm Francisella sp. MA067296 2017 GenBank
Allofrancisella fgu Allofrancisella guangzhouensis 2015 GenBank
Hydrogenovibrio tcx Hydrogenovibrio crunogenus 2005 GenBank
Thiomicrospira tcy Thiomicrospira cyclica 2011 GenBank
tao Thiomicrospira aerophila 2015 GenBank
Methylophaga mej Methylophaga nitratireducenticrescens 2012 GenBank
mec Methylophaga frappieri 2012 GenBank
Cycloclasticus cyq Cycloclasticus sp. P1 2012 GenBank
cza Cycloclasticus zancles 2013 GenBank
cyy Cycloclasticus sp. PY97N 2017 GenBank
Piscirickettsia psal Piscirickettsia salmonis 2015 GenBank
Thioploca tig Thioploca ingrica 2015 GenBank
Beggiatoa blep Beggiatoa leptomitiformis 2016 GenBank
Nitrosococcus noc Nitrosococcus oceani 2005 GenBank
nhl Nitrosococcus halophilus 2010 GenBank
nwa Nitrosococcus watsonii 2010 GenBank
Allochromatium alv Allochromatium vinosum 2010 GenBank
Thiocystis tvi Thiocystis violascens 2012 GenBank
Thioflavicoccus tmb Thioflavicoccus mobilis 2012 GenBank
Marichromatium mpur Marichromatium purpuratum 2015 GenBank
Tenderia tee Candidatus Tenderia electrophaga 2016 GenBank
Nitrosoglobus ntt Candidatus Nitrosoglobus terrae 2017 GenBank
Thiodictyon tsy Candidatus Thiodictyon syntrophicum 2017 GenBank
Alkalilimnicola aeh Alkalilimnicola ehrlichii 2006 GenBank
Halorhodospira hha Halorhodospira halophila 2007 GenBank
hhc Halorhodospira halochloris 2014 GenBank
Thioalkalivibrio tgr Thioalkalivibrio sulfidiphilus 2009 GenBank
tkm Thioalkalivibrio sp. K90mix 2010 GenBank
tni Thioalkalivibrio nitratireducens 2013 GenBank
tti Thioalkalivibrio paradoxus 2015 GenBank
tvr Thioalkalivibrio versutus 2015 GenBank
Spiribacter ssal Spiribacter salinus 2013 GenBank
spiu Spiribacter sp. UAH-SP71 2013 GenBank
Ectothiorhodospira ebs Ectothiorhodospira sp. BSL-9 2016 GenBank
Acidihalobacter aprs Acidihalobacter prosperus 2016 GenBank
Halothiobacillus hna Halothiobacillus neapolitanus 2009 GenBank
haz Halothiobacillus sp. LS2 2016 GenBank
Wenzhouxiangella wma Wenzhouxiangella marina 2015 GenBank
Woeseia woc Woeseia oceani 2016 GenBank
Granulosicoccus gai Granulosicoccus antarcticus 2017 GenBank
Hahella hch Hahella chejuensis 2005 GenBank
Chromohalobacter csa Chromohalobacter salexigens 2006 GenBank
Halomonas hel Halomonas elongata 2010 GenBank
hcs Halomonas campaniensis 2014 GenBank
hak Halomonas sp. KO116 2015 GenBank
ham Halomonas sp. R57-5 2015 GenBank
hhu Halomonas huangheensis 2016 GenBank
hco Halomonas chromatireducens 2016 GenBank
hsi Halomonas aestuarii 2016 GenBank
halo Halomonas sp. 1513 2017 GenBank
hhh Halomonas hydrothermalis 2017 GenBank
hbe Halomonas beimenensis 2017 GenBank
hag Halomonas sp. GFAJ-1 2018 GenBank
haf Halomonas sp. SF2003 2018 GenBank
Portiera ple Candidatus Portiera aleyrodidarum BT-B 2012 GenBank
ply Candidatus Portiera aleyrodidarum BT-B-HRs 2012 GenBank
plr Candidatus Portiera aleyrodidarum BT-QVLC 2012 GenBank
plo Candidatus Portiera aleyrodidarum BT-QVLC 2012 GenBank
pld Candidatus Portiera aleyrodidarum TV 2013 GenBank
plb Candidatus Portiera aleyrodidarum TV-BCN 2015 GenBank
plc Candidatus Portiera aleyrodidarum AD-CAI 2015 GenBank
pli Candidatus Portiera aleyrodidarum AF-CAI 2015 GenBank
paly Candidatus Portiera aleyrodidarum MED 2015 GenBank
Carsonella crp Candidatus Carsonella ruddii PV (Pachypsylla venusta) 2006 GenBank
cru Candidatus Carsonella ruddii CE (Ctenarytaina eucalypti) 2012 GenBank
crc Candidatus Carsonella ruddii CS (Ctenarytaina spatulata) 2012 GenBank
crt Candidatus Carsonella ruddii HT (Heteropsylla texana) 2012 GenBank
crh Candidatus Carsonella ruddii HC (Heteropsylla cubana) 2012 GenBank
crv Candidatus Carsonella ruddii PC (Pachypsylla celtidis) 2012 GenBank
cri Candidatus Carsonella ruddii DC (Diaphorina citri) 2013 GenBank
Evansia eme Candidatus Evansia muelleri 2015 GenBank
Halotalea haa Halotalea alkalilenta 2016 GenBank
Cobetia cmai Cobetia marina 2017 GenBank
Kushneria kus Kushneria konosiri 2017 GenBank
kma Kushneria marisflavi 2017 GenBank
Alcanivorax abo Alcanivorax borkumensis 2006 GenBank
adi Alcanivorax dieselolei 2012 GenBank
apac Alcanivorax pacificus 2015 GenBank
aln Alcanivorax sp. NBRC 101098 2015 GenBank
axe Alcanivorax xenomutans 2017 GenBank
Ketobacter kak Ketobacter alkanivorans 2018 GenBank
Kangiella kko Kangiella koreensis 2009 GenBank
kge Kangiella geojedonensis 2015 GenBank
ksd Kangiella sediminilitoris 2016 GenBank
kpd Kangiella profundi 2018 GenBank
Marinomonas mmw Marinomonas sp. MWYL1 2007 GenBank
mme Marinomonas mediterranea 2011 GenBank
mpc Marinomonas posidonica 2011 GenBank
Thalassolituus tol Thalassolituus oleivorans MIL-1 2013 GenBank
tor Thalassolituus oleivorans R6-15 2014 GenBank
Oleispira oai Oleispira antarctica 2015 GenBank
Marinobacterium mars Marinobacterium aestuarii 2016 GenBank
Bacterioplanes bsan Bacterioplanes sanyensis 2017 GenBank
Gynuella gsn Gynuella sunshinyii 2015 GenBank
Reinekea rfo Reinekea forsetii 2017 GenBank
Oleiphilus ome Oleiphilus messinensis 2017 GenBank
Aeromonas aha Aeromonas hydrophila subsp. hydrophila ATCC 7966 2006 RefSeq
ahy Aeromonas hydrophila ML09-119 2013 GenBank
ahd Aeromonas hydrophila YL17 2014 GenBank
ahr Aeromonas hydrophila AL09-71 2014 GenBank
ahp Aeromonas hydrophila pc104A 2014 GenBank
ahj Aeromonas hydrophila J-1 2015 GenBank
ahh Aeromonas hydrophila AL06-06 2015 GenBank
ahi Aeromonas hydrophila AH10 2015 GenBank
asa Aeromonas salmonicida subsp. salmonicida A449 2007 GenBank
aeo Aeromonas salmonicida O23A 2017 GenBank
avr Aeromonas veronii B565 2011 GenBank
avo Aeromonas veronii TH0426 2016 GenBank
amed Aeromonas media 2014 GenBank
asr Aeromonas schubertii 2016 GenBank
aaj Aeromonas aquatica 2017 GenBank
adh Aeromonas dhakensis 2017 GenBank
acav Aeromonas caviae 2017 GenBank
aem Aeromonas sp. CU5 2018 GenBank
aea Aeromonas sp. ASNIH3 2018 GenBank
arv Aeromonas rivipollensis 2018 GenBank
Tolumonas tau Tolumonas auensis 2009 GenBank
Oceanimonas oce Oceanimonas sp. GK1 2012 GenBank
Oceanisphaera ocm Oceanisphaera avium 2017 GenBank
opf Oceanisphaera profunda 2017 GenBank
Zobellella zdf Zobellella denitrificans 2017 GenBank
Dichelobacter dno Dichelobacter nodosus 2007 GenBank
Gilliamella gap Gilliamella apicola 2014 GenBank
Frischella fpp Frischella perrara 2015 GenBank
Steroidobacter sdf Steroidobacter denitrificans 2016 GenBank
Solimonas sok Solimonas sp. K1W22B-7 2018 GenBank
Immundisolibacter gbi Immundisolibacter cernigliae 2016 GenBank
Sulfuricaulis slim Sulfuricaulis limicola 2018 GenBank
Sulfurifustis sva Sulfurifustis variabilis 2018 GenBank
Acidiferrobacter acii Acidiferrobacter sp. SPIII_3 2018 GenBank
Salinisphaera saln Salinisphaera sp. LB1 2018 GenBank
Thiolapillus tbn Thiolapillus brandeum 2015 GenBank
Sedimenticola seds Sedimenticola thiotaurini 2015 GenBank
Thioglobus tsn Candidatus Thioglobus singularis 2015 GenBank
tho Candidatus Thioglobus autotrophicus 2016 GenBank
Pseudohongiella pspi Pseudohongiella spirulinae 2016 GenBank
Thiohalobacter ttc Thiohalobacter thiocyanaticus 2017 GenBank
Ruthia rma Candidatus Ruthia magnifica (Calyptogena magnifica) 2006 GenBank
Unclassified Gammaproteobacteria vok Candidatus Vesicomyosocius okutanii (Calyptogena okutanii) 2007 GenBank
ebh Endosymbiont of Bathymodiolus septemdierum 2017 GenBank
bci Baumannia cicadellinicola Hc (Homalodisca coagulata) 2006 GenBank
bcib Candidatus Baumannia cicadellinicola BGSS 2014 GenBank
bcig Candidatus Baumannia cicadellinicola B-GSS 2016 GenBank
gpb Gamma proteobacterium HdN1 2010 GenBank
enm Endosymbiont of unidentified scaly snail isolate Monju 2016 GenBank
Betaproteobacteria Neisseria nme Neisseria meningitidis MC58 (serogroup B) 2000 RefSeq
nmp Neisseria meningitidis alpha710 (serogroup B) 2012 GenBank
nmh Neisseria meningitidis H44/76 (serogroup B) 2012 GenBank
nmd Neisseria meningitidis G2136 (serogroup B) 2012 GenBank
nmm Neisseria meningitidis M01-240149 (serogroup B) 2012 GenBank
nms Neisseria meningitidis M01-240355 (serogroup B) 2012 GenBank
nmq Neisseria meningitidis M04-240196 (serogroup B) 2012 GenBank
nmz Neisseria meningitidis NZ-05/33 (serogroup B) 2012 GenBank
nma Neisseria meningitidis Z2491 (serogroup A) 2000 GenBank
nmw Neisseria meningitidis WUE 2594 (serogroup A) 2012 GenBank
nmx Neisseria meningitidis 510612 (serogroup A) 2014 GenBank
nmc Neisseria meningitidis FAM18 (serogroup C) 2007 GenBank
nmn Neisseria meningitidis 053442 (serogroup C) 2007 GenBank
nmt Neisseria meningitidis 8013 (serogroup C) 2012 GenBank
nmi Neisseria meningitidis alpha14 (cnl strain) 2009 GenBank
ngo Neisseria gonorrhoeae FA 1090 2005 RefSeq
ngk Neisseria gonorrhoeae NCCP11945 2008 GenBank
nla Neisseria lactamica 2010 GenBank
nel Neisseria elongata 2015 GenBank
nwe Neisseria weaveri 2016 GenBank
nsi Neisseria sicca 2017 GenBank
nmj Neisseria mucosa 2018 GenBank
Snodgrassella salv Snodgrassella alvi 2014 GenBank
Kingella kki Kingella kingae 2016 GenBank
Vitreoscilla vff Vitreoscilla filiformis 2017 GenBank
vit Vitreoscilla sp. C1 2018 GenBank
Eikenella ecor Eikenella corrodens 2017 GenBank
Simonsiella smur Simonsiella muelleri 2018 GenBank
Unclassified Neisseriaceae nba Neisseriaceae bacterium DSM 100970 2018 GenBank
Chromobacterium cvi Chromobacterium violaceum 2003 GenBank
cvc Chromobacterium vaccinii 2016 GenBank
chro Chromobacterium sp. ATCC 53434 2018 GenBank
chri Chromobacterium sp. IIBBL 112-1 2018 GenBank
Laribacter lhk Laribacter hongkongensis 2009 GenBank
Pseudogulbenkiania pse Pseudogulbenkiania sp. NH8B 2011 GenBank
Jeongeupia jeu Jeongeupia sp. USM3 2016 GenBank
Aquaspirillum aql Aquaspirillum sp. LM1 2017 GenBank
Ralstonia rso Ralstonia solanacearum GMI1000 2001 GenBank
rsc Ralstonia solanacearum CFBP2957 2010 GenBank
rsl Ralstonia solanacearum PSI07 2010 GenBank
rsn Ralstonia solanacearum Po82 2012 GenBank
rsm Ralstonia solanacearum CMR15 2013 GenBank
rse Ralstonia solanacearum FQY_4 2013 GenBank
rpi Ralstonia pickettii 12J 2008 GenBank
rpf Ralstonia pickettii 12D 2009 GenBank
rpj Ralstonia pickettii DTP0602 2014 GenBank
rmn Ralstonia mannitolilytica 2015 GenBank
rin Ralstonia insidiosa 2016 GenBank
Cupriavidus reu Cupriavidus pinatubonensis JMP134 2005 GenBank
reh Cupriavidus necator H16 2006 GenBank
cnc Cupriavidus necator N-1 2011 GenBank
rme Cupriavidus metallidurans 2006 GenBank
cti Cupriavidus taiwanensis 2008 GenBank
cbw Cupriavidus basilensis 2015 GenBank
cgd Cupriavidus gilardii 2015 GenBank
ccup Cupriavidus sp. USMAHM13 2017 GenBank
cup Cupriavidus sp. USMAA1020 2017 GenBank
cuu Cupriavidus sp. USMAA2-4 2017 GenBank
cuh Cupriavidus sp. NH9 2017 GenBank
Burkholderia bma Burkholderia mallei ATCC 23344 2004 RefSeq
bmv Burkholderia mallei SAVP1 2007 GenBank
bml Burkholderia mallei NCTC 10229 2007 GenBank
bmn Burkholderia mallei NCTC 10247 2007 GenBank
bmal Burkholderia mallei 23344 2014 GenBank
bmae Burkholderia mallei 6 2014 GenBank
bmaq Burkholderia mallei BMQ 2014 GenBank
bmai Burkholderia mallei 2000031063 2015 GenBank
bmaf Burkholderia mallei FMH 23344 2015 GenBank
bmaz Burkholderia mallei NCTC 10247 2015 GenBank
bmab Burkholderia mallei 2002734299 2015 GenBank
bps Burkholderia pseudomallei K96243 2004 RefSeq
bpm Burkholderia pseudomallei 1710b 2005 GenBank
bpl Burkholderia pseudomallei 1106a 2007 GenBank
bpd Burkholderia pseudomallei 668 2007 GenBank
bpr Burkholderia pseudomallei MSHR346 2009 GenBank
bpse Burkholderia pseudomallei MSHR305 2013 GenBank
bpsm Burkholderia pseudomallei MSHR511 2014 GenBank
bpsu Burkholderia pseudomallei MSHR146 2014 GenBank
bpsd Burkholderia pseudomallei MSHR520 2014 GenBank
bpz Burkholderia pseudomallei 1026b 2012 GenBank
bpq Burkholderia pseudomallei BPC006 2012 GenBank
bpk Burkholderia pseudomallei NCTC 13179 2013 GenBank
bpsh Burkholderia pseudomallei HBPUB10134a 2014 GenBank
bpsa Burkholderia pseudomallei NAU35A-3 2014 GenBank
bpso Burkholderia pseudomallei A79A 2014 GenBank
but Burkholderia pseudomallei TSV202 2014 GenBank
bte Burkholderia thailandensis E264 2005 GenBank
btq Burkholderia thailandensis 2002721723 2014 GenBank
btj Burkholderia thailandensis E444 2014 GenBank
btz Burkholderia thailandensis H0587 2014 GenBank
btd Burkholderia thailandensis MSMB121 2013 GenBank
btv Burkholderia thailandensis MSMB59 2014 GenBank
bthe Burkholderia thailandensis E254 2014 GenBank
bthm Burkholderia thailandensis USAMRU Malaysia #20 2014 GenBank
btha Burkholderia thailandensis 2003015869 2015 GenBank
bthl Burkholderia thailandensis 2002721643 2015 GenBank
bok Burkholderia oklahomensis E0147 2014 GenBank
boc Burkholderia oklahomensis C6786 2015 GenBank
bvi Burkholderia vietnamiensis G4 2007 GenBank
bve Burkholderia vietnamiensis LMG 10929 2015 GenBank
bur Burkholderia lata 2005 GenBank
bcn Burkholderia cenocepacia AU1054 2006 GenBank
bch Burkholderia cenocepacia HI2424 2006 GenBank
bcm Burkholderia cenocepacia MC0-3 2008 GenBank
bcj Burkholderia cenocepacia J2315 2008 GenBank
bcen Burkholderia cenocepacia DDS 22E-1 2014 GenBank
bcew Burkholderia cenocepacia DWS 37E-2 2014 GenBank
bceo Burkholderia cenocepacia H111 2015 GenBank
bam Burkholderia ambifaria AMMD 2006 GenBank
bac Burkholderia ambifaria MC40-6 2008 GenBank
bmu Burkholderia multivorans ATCC 17616 (JGI) 2007 GenBank
bmj Burkholderia multivorans ATCC 17616 (Tohoku) 2008 GenBank
bmk Burkholderia multivorans DDS 15A-1 2014 GenBank
bmul Burkholderia multivorans ATCC BAA-247 2015 GenBank
bct Burkholderia cepacia GG4 2012 GenBank
bced Burkholderia cepacia DDS 7H-2 2014 GenBank
bcep Burkholderia cepacia ATCC 25416 2017 GenBank
bdl Burkholderia dolosa 2015 GenBank
bpyr Burkholderia pyrrocinia 2015 GenBank
bcon Burkholderia contaminans 2015 GenBank
bub Burkholderia ubonensis 2015 GenBank
bdf Burkholderia diffusa 2017 GenBank
blat Burkholderia latens 2017 GenBank
btei Burkholderia territorii 2017 GenBank
bsem Burkholderia seminalis 2017 GenBank
bpsl Burkholderia pseudomultivorans 2017 GenBank
bmec Burkholderia metallica 2017 GenBank
bstg Burkholderia stagnalis 2017 GenBank
bstl Burkholderia stabilis 2017 GenBank
bgl Burkholderia glumae BGR1 2009 GenBank
bgp Burkholderia glumae PG1 2015 GenBank
bgu Burkholderia glumae LMG 2196 = ATCC 33617 2015 GenBank
bug Burkholderia sp. CCGE1001 2011 GenBank
bge Burkholderia sp. CCGE1002 2010 GenBank
bgf Burkholderia sp. CCGE1003 2010 GenBank
bgd Burkholderia gladioli BSR3 2011 GenBank
bgo Burkholderia gladioli ATCC 10248 2015 GenBank
byi Burkholderia sp. YI23 2012 GenBank
buk Burkholderia sp. KJ006 2012 GenBank
buo Burkholderia insecticola 2013 GenBank
bue Burkholderia sp. RPE67 2015 GenBank
bul Burkholderia sp. 2002721687 2015 GenBank
buq Burkholderia sp. HB1 2016 GenBank
bpla Burkholderia plantarii 2016 GenBank
bud Burkholderia sp. Bp5365 2016 GenBank
buz Burkholderia sp. OLGA172 2017 GenBank
bum Burkholderia sp. PAMC 26561 2018 GenBank
Paraburkholderia bxe Paraburkholderia xenovorans LB400 2006 GenBank
bxb Paraburkholderia xenovorans LB400 2014 GenBank
bph Paraburkholderia phymatum 2008 GenBank
brh Paraburkholderia rhizoxinica 2010 GenBank
bpx Paraburkholderia phenoliruptrix 2012 GenBank
bpy Paraburkholderia phytofirmans 2008 GenBank
bfn Paraburkholderia fungorum 2015 GenBank
bcai Paraburkholderia caribensis 2016 GenBank
pspw Paraburkholderia sprentiae 2017 GenBank
para Paraburkholderia sp. SOS3 2017 GenBank
parb Paraburkholderia aromaticivorans 2017 GenBank
phs Paraburkholderia hospita 2018 GenBank
pter Paraburkholderia terrae 2018 GenBank
pgp Paraburkholderia graminis 2018 GenBank
Polynucleobacter pnu Polynucleobacter asymbioticus 2007 GenBank
pne Polynucleobacter necessarius 2008 GenBank
pdq Polynucleobacter duraquae 2016 GenBank
poh Polynucleobacter sp. MWH-Creno-4B4 2018 GenBank
Pandoraea ppk Pandoraea pnomenusa 3kgm 2013 GenBank
ppno Pandoraea pnomenusa RB38 2014 GenBank
ppnm Pandoraea pnomenusa DSM 16536 2014 GenBank
prb Pandoraea pnomenusa 2013 GenBank
ppul Pandoraea pulmonicola 2015 GenBank
pspu Pandoraea sputorum 2015 GenBank
papi Pandoraea apista 2015 GenBank
pve Pandoraea vervacti 2015 GenBank
pox Pandoraea oxalativorans 2015 GenBank
ptx Pandoraea thiooxydans 2015 GenBank
pfg Pandoraea faecigallinarum 2015 GenBank
pnr Pandoraea norimbergensis 2016 GenBank
Paucimonas plg Paucimonas lemoignei 2018 GenBank
Hydromonas hyf Hydromonas sp. F02 2018 GenBank
Bordetella bpe Bordetella pertussis Tohama I 2003 RefSeq
bpc Bordetella pertussis CS 2012 GenBank
bper Bordetella pertussis 18323 2012 GenBank
bpet Bordetella pertussis B1917 2015 GenBank
bpeu Bordetella pertussis 137 2015 GenBank
bpa Bordetella parapertussis 12822 2003 GenBank
bpar Bordetella parapertussis Bpp5 2012 RefSeq
bbr Bordetella bronchiseptica RB50 2003 GenBank
bbm Bordetella bronchiseptica MO149 2012 GenBank
bbh Bordetella bronchiseptica 253 2012 RefSeq
bbx Bordetella bronchiseptica S798 2015 GenBank
bpt Bordetella petrii 2007 GenBank
bav Bordetella avium 2008 GenBank
bho Bordetella holmesii ATCC 51541 2014 GenBank
bhm Bordetella holmesii 44057 2014 GenBank
bhz Bordetella hinzii 2015 GenBank
btrm Bordetella trematum 2016 GenBank
bbro Bordetella bronchialis 2017 GenBank
bfz Bordetella flabilis 2017 GenBank
bpdz Bordetella pseudohinzii 2017 GenBank
boh Bordetella sp. H567 2017 GenBank
bgm Bordetella genomosp. 13 2018 GenBank
boz Bordetella sp. HZ20 2018 GenBank
Achromobacter axy Achromobacter xylosoxidans A8 2010 GenBank
axo Achromobacter xylosoxidans NH44784-1996 2013 GenBank
axn Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 2013 GenBank
axs Achromobacter xylosoxidans C54 2014 GenBank
axx Achromobacter xylosoxidans NCTC10807 2016 GenBank
adt Achromobacter denitrificans 2016 GenBank
ais Achromobacter insolitus 2017 GenBank
asw Achromobacter spanius 2018 GenBank
achr Achromobacter sp. AONIH1 2018 GenBank
Taylorella teq Taylorella equigenitalis MCE9 2011 GenBank
tea Taylorella equigenitalis ATCC 35865 2012 GenBank
teg Taylorella equigenitalis 14/56 2013 GenBank
tas Taylorella asinigenitalis MCE3 2011 GenBank
tat Taylorella asinigenitalis 14/45 2013 GenBank
Pusillimonas put Pusillimonas sp. T7-7 2011 GenBank
Advenella aka Advenella kashmirensis 2012 GenBank
amim Advenella mimigardefordensis 2014 GenBank
Castellaniella cdn Castellaniella defragrans 2014 GenBank
Basilea bpsi Basilea psittacipulmonis 2014 GenBank
Alcaligenes afa Alcaligenes faecalis ZD02 2016 GenBank
afq Alcaligenes faecalis JQ135 2018 GenBank
Paenalcaligenes phn Paenalcaligenes hominis 2017 GenBank
Orrella odi Orrella dioscoreae 2017 GenBank
Oligella our Oligella urethralis 2018 GenBank
Rhodoferax rfr Rhodoferax ferrireducens 2006 GenBank
rsb Rhodoferax saidenbachensis 2017 GenBank
rac Rhodoferax antarcticus 2017 GenBank
rhy Rhodoferax koreense 2017 GenBank
Polaromonas pol Polaromonas sp. JS666 2006 GenBank
pna Polaromonas naphthalenivorans 2007 GenBank
Acidovorax aav Acidovorax citrulli 2007 GenBank
ajs Acidovorax sp. JS42 2007 GenBank
dia Acidovorax ebreus 2009 GenBank
aaa Acidovorax avenae 2011 GenBank
ack Acidovorax sp. KKS102 2012 GenBank
acra Acidovorax sp. RAC01 2016 GenBank
acid Acidovorax carolinensis NA2 2017 GenBank
acip Acidovorax carolinensis P4 2017 GenBank
acin Acidovorax carolinensis NA3 2017 GenBank
acis Acidovorax carolinensis P3 2017 GenBank
Verminephrobacter vei Verminephrobacter eiseniae 2007 GenBank
Delftia dac Delftia acidovorans 2007 GenBank
del Delftia sp. Cs1-4 2011 GenBank
dts Delftia tsuruhatensis 2016 GenBank
dhk Delftia sp. HK171 2017 GenBank
Variovorax vap Variovorax paradoxus S110 2009 GenBank
vpe Variovorax paradoxus EPS 2011 GenBank
vpd Variovorax paradoxus B4 2013 GenBank
vaa Variovorax sp. PAMC 28711 2016 GenBank
vbo Variovorax boronicumulans 2017 GenBank
vam Variovorax sp. PMC12 2018 GenBank
Comamonas ctt Comamonas testosteroni CNB-2 2009 GenBank
ctes Comamonas testosteroni TK102 2014 GenBank
cke Comamonas kerstersii 2017 GenBank
cser Comamonas serinivorans 2017 GenBank
Alicycliphilus adn Alicycliphilus denitrificans BC 2011 GenBank
adk Alicycliphilus denitrificans K601 2011 GenBank
Ramlibacter rta Ramlibacter tataouinensis 2011 GenBank
Symbiobacter cbx Candidatus Symbiobacter mobilis 2013 GenBank
Ottowia oto Ottowia sp. oral taxon 894 2015 GenBank
otk Ottowia oryzae 2018 GenBank
Limnohabitans lim Limnohabitans sp. 103DPR2 2016 GenBank
lih Limnohabitans sp. 63ED37-2 2016 GenBank
Hydrogenophaga hyr Hydrogenophaga sp. RAC07 2016 GenBank
hyb Hydrogenophaga sp. PBC 2016 GenBank
hyl Hydrogenophaga sp. LPB0072 2016 GenBank
Diaphorobacter dpy Diaphorobacter polyhydroxybutyrativorans 2017 GenBank
Simplicispira simp Simplicispira suum 2018 GenBank
Melaminivora melm Melaminivora sp. SC2-7 2018 GenBank
mela Melaminivora sp. SC2-9 2018 GenBank
Unclassified Comamonadaceae cbaa Comamonadaceae bacterium A1 2015 GenBank
cbab Comamonadaceae bacterium B1 2015 GenBank
Methylibium mpt Methylibium petroleiphilum 2007 GenBank
Herminiimonas har Herminiimonas arsenicoxydans 2007 GenBank
Janthinobacterium mms Janthinobacterium sp. Marseille 2007 GenBank
jag Janthinobacterium agaricidamnosum 2014 GenBank
jab Janthinobacterium sp. B9-8 2016 GenBank
jaz Janthinobacterium sp. 1_2014MBL_MicDiv 2016 GenBank
jal Janthinobacterium sp. LM6 2017 GenBank
jsv Janthinobacterium svalbardensis 2017 GenBank
Herbaspirillum hse Herbaspirillum seropedicae SmR1 2010 GenBank
hsz Herbaspirillum seropedicae Z67 2016 GenBank
hht Herbaspirillum hiltneri 2015 GenBank
hrb Herbaspirillum rubrisubalbicans 2016 GenBank
hee Herbaspirillum sp. meg3 2017 GenBank
Zinderia zin Candidatus Zinderia insecticola 2010 GenBank
Collimonas cfu Collimonas fungivorans 2011 GenBank
care Collimonas arenae 2015 GenBank
cpra Collimonas pratensis 2016 GenBank
Massilia mnr Massilia sp. NR 4-1 2015 GenBank
masw Massilia sp. WG5 2016 GenBank
mass Massilia violaceinigra 2017 GenBank
masz Massilia armeniaca 2018 GenBank
mtim Massilia timonae 2018 GenBank
masy Massilia sp. YMA4 2018 GenBank
Oxalobacter ofo Oxalobacter formigenes 2017 GenBank
Leptothrix lch Leptothrix cholodnii 2008 GenBank
Thiomonas tin Thiomonas intermedia 2010 GenBank
thi Thiomonas arsenitoxydans 2012 GenBank
Rubrivivax rge Rubrivivax gelatinosus 2012 GenBank
rbn Rubrivivax benzoatilyticus 2016 GenBank
Roseateles rdp Roseateles depolymerans 2016 GenBank
Paucibacter pkt Paucibacter sp. KCTC 42545 2016 GenBank
Mitsuaria miu Mitsuaria sp. 7 2016 GenBank
Rhizobacter rgu Rhizobacter gummiphilus 2017 GenBank
Aquabacterium aon Aquabacterium olei 2018 GenBank
Unclassified Burkholderiales bbag Burkholderiales bacterium GJ-E10 2015 GenBank
bbay Burkholderiales bacterium YL45 2017 GenBank
pbh Polyangium brachysporum 2016 GenBank
Nitrosomonas neu Nitrosomonas europaea 2003 GenBank
net Nitrosomonas eutropha 2006 GenBank
nit Nitrosomonas sp. AL212 2011 GenBank
nii Nitrosomonas sp. Is79A3 2011 GenBank
nco Nitrosomonas communis 2015 GenBank
nur Nitrosomonas ureae 2016 GenBank
Nitrosospira nmu Nitrosospira multiformis 2005 GenBank
nlc Nitrosospira lacus 2017 GenBank
Sulfuritalea shd Sulfuritalea hydrogenivorans 2015 GenBank
Methyloversatilis metr Methyloversatilis sp. RAC08 2016 GenBank
Thiobacillus tbd Thiobacillus denitrificans 2005 GenBank
Methylobacillus mfa Methylobacillus flagellatus 2006 GenBank
Methylotenera mmb Methylotenera mobilis 2009 GenBank
meh Methylotenera versatilis 2010 GenBank
Methylovorus mei Methylovorus glucosetrophus 2009 GenBank
mep Methylovorus sp. MP688 2010 GenBank
Methylopumilus mbac Candidatus Methylopumilus turicensis 2015 GenBank
mbat Candidatus Methylopumilus planktonicus 2015 GenBank
Methylophilus meu Methylophilus sp. TWE2 2015 GenBank
Sideroxydans slt Sideroxydans lithotrophicus 2010 GenBank
Gallionella gca Gallionella capsiferriformans 2010 GenBank
Sulfuricella sdr Sulfuricella denitrificans 2013 GenBank
Sulfuriferula sulf Sulfuriferula sp. AH1 2017 GenBank
Aromatoleum eba Aromatoleum aromaticum 2004 GenBank
Azospira dsu Azospira oryzae 2012 GenBank
Rugosibacter rbu Rugosibacter aromaticivorans 2015 GenBank
Unclassified Rhodocyclaceae rbh Rhodocyclaceae bacterium Thauera-like 2018 GenBank
Dechloromonas dar Dechloromonas aromatica 2005 GenBank
dey Dechloromonas sp. HYN0024 2018 GenBank
Azoarcus azo Azoarcus sp. BH72 2006 GenBank
aza Azoarcus sp. KH32C 2013 GenBank
azi Azoarcus sp. CIB 2015 GenBank
aoa Azoarcus olearius 2016 GenBank
atw Azoarcus sp. SY39 2018 GenBank
acom Azoarcus communis 2018 GenBank
Thauera tmz Thauera sp. MZ1T 2008 GenBank
thu Thauera humireducens 2016 GenBank
tcl Thauera chlorobenzoica 2017 GenBank
thk Thauera sp. K11 2017 GenBank
tak Thauera aromatica 2018 GenBank
Unclassified Zoogloeaceae zpa Zoogloeaceae bacteirum Par-f-2 2018 GenBank
Accumulibacter app Accumulibacter phosphatis 2009 GenBank
Tremblaya tpn Candidatus Tremblaya princeps PCIT 2011 GenBank
tpq Candidatus Tremblaya princeps PCVAL 2012 GenBank
tpj Candidatus Tremblaya phenacola 2013 GenBank
Kinetoplastibacterium kci Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 2013 GenBank
kct Candidatus Kinetoplastibacterium crithidii TCC036E 2013 GenBank
kbl Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis) 2013 GenBank
kbt Candidatus Kinetoplastibacterium blastocrithidii TCC012E 2013 GenBank
kde Candidatus Kinetoplastibacterium desouzaii 2013 GenBank
kga Candidatus Kinetoplastibacterium galatii 2013 GenBank
kon Candidatus Kinetoplastibacterium oncopeltii 2013 GenBank
kso Candidatus Kinetoplastibacterium sorsogonicusi 2018 GenBank
Profftella ssdc Candidatus Profftella armatura 2013 GenBank
Nasuia ndl Candidatus Nasuia deltocephalinicola 2013 GenBank
Vidania vfg Candidatus Vidania fulgoroideae 2018 GenBank
Unclassified Betaproteobacteria bprc Beta proteobacterium CB 2013 GenBank
beb Betaproteobacteria bacterium UKL13-2 2016 GenBank
beba Betaproteobacteria bacterium GR16-43 2017 GenBank
Epsilonproteobacteria Helicobacter hpy Helicobacter pylori 26695 1997 RefSeq
heo Helicobacter pylori 26695 2012 GenBank
hpj Helicobacter pylori J99 1999 GenBank
hpa Helicobacter pylori HPAG1 2006 GenBank
hps Helicobacter pylori Shi470 2008 GenBank
hhp Helicobacter pylori Shi112 2012 GenBank
hhq Helicobacter pylori Shi169 2012 GenBank
hhr Helicobacter pylori Shi417 2012 GenBank
hpg Helicobacter pylori G27 2008 GenBank
hpp Helicobacter pylori P12 2008 GenBank
hpb Helicobacter pylori B38 2009 GenBank
hpl Helicobacter pylori B8 2010 GenBank
hpc Helicobacter pylori PeCan4 2010 GenBank
hca Helicobacter pylori PeCan18 2012 GenBank
hpm Helicobacter pylori SJM180 2010 GenBank
hpe Helicobacter pylori ELS37 2012 GenBank
hpo Helicobacter pylori 35A 2012 GenBank
hpi Helicobacter pylori 908 2012 GenBank
hpq Helicobacter pylori 2017 2012 GenBank
hpw Helicobacter pylori 2018 2012 GenBank
hpu Helicobacter pylori Cuz20 2012 GenBank
hef Helicobacter pylori F16 2012 GenBank
hpf Helicobacter pylori F30 2012 GenBank
heq Helicobacter pylori F32 2012 GenBank
hex Helicobacter pylori F57 2012 GenBank
hpt Helicobacter pylori Sat464 2012 GenBank
hpz Helicobacter pylori 52 2012 GenBank
hpv Helicobacter pylori v225d 2012 GenBank
hpx Helicobacter pylori 83 2012 GenBank
hen Helicobacter pylori SNT49 2012 GenBank
hph Helicobacter pylori Lithuania75 2012 GenBank
heg Helicobacter pylori Gambia94/24 2012 GenBank
hpn Helicobacter pylori India7 2012 GenBank
hep Helicobacter pylori Puno120 2012 GenBank
heu Helicobacter pylori Puno135 2012 GenBank
hes Helicobacter pylori SouthAfrica7 2012 GenBank
hpys Helicobacter pylori SouthAfrica20 2013 GenBank
hcn Helicobacter pylori HUP-B14 2012 GenBank
hpd Helicobacter pylori 51 2012 GenBank
hey Helicobacter pylori XZ274 2012 GenBank
her Helicobacter pylori Rif1 2012 GenBank
hei Helicobacter pylori Rif2 2012 GenBank
hpya Helicobacter pylori Aklavik117 2012 GenBank
hpyk Helicobacter pylori Aklavik86 2012 GenBank
hpyo Helicobacter pylori OK113 2013 GenBank
hpyl Helicobacter pylori OK310 2013 GenBank
hpyb Helicobacter pylori oki102 2014 GenBank
hpyc Helicobacter pylori oki112 2015 GenBank
hpyd Helicobacter pylori oki128 2015 GenBank
hpye Helicobacter pylori oki154 2015 GenBank
hpyf Helicobacter pylori oki422 2015 GenBank
hpyg Helicobacter pylori oki673 2015 GenBank
hpyh Helicobacter pylori oki828 2015 GenBank
hpyj Helicobacter pylori oki898 2015 GenBank
hpyr Helicobacter pylori UM032 2013 GenBank
hpyi Helicobacter pylori UM037 2013 GenBank
hpyu Helicobacter pylori UM066 2013 GenBank
hpym Helicobacter pylori UM299 2013 GenBank
hem Helicobacter pylori UM298 2013 GenBank
heb Helicobacter pylori BM012A 2013 GenBank
hez Helicobacter pylori BM012S 2013 GenBank
hhe Helicobacter hepaticus 2003 GenBank
hac Helicobacter acinonychis 2006 GenBank
hms Helicobacter mustelae 2010 GenBank
hfe Helicobacter felis 2010 GenBank
hbi Helicobacter bizzozeronii 2011 GenBank
hce Helicobacter cetorum MIT 00-7128 2012 GenBank
hcm Helicobacter cetorum MIT 99-5656 2012 GenBank
hcp Helicobacter cinaedi PAGU611 2012 GenBank
hcb Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 2013 GenBank
hhm Helicobacter heilmannii 2013 GenBank
hty Helicobacter typhlonius 2016 GenBank
hbl Helicobacter bilis 2017 GenBank
had Helicobacter apodemus 2018 GenBank
Wolinella wsu Wolinella succinogenes 2003 GenBank
Sulfurimonas tdn Sulfurimonas denitrificans 2005 GenBank
sua Sulfurimonas autotrophica 2010 GenBank
Sulfuricurvum sku Sulfuricurvum kujiense 2010 GenBank
sulr Candidatus Sulfuricurvum sp. RIFRC-1 2013 GenBank
Campylobacter cje Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 2000 RefSeq
cjb Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 2012 GenBank
cjj Campylobacter jejuni subsp. jejuni 81-176 2007 GenBank
cju Campylobacter jejuni subsp. jejuni 81116 2007 GenBank
cjn Campylobacter jejuni subsp. jejuni ICDCCJ07001 2010 GenBank
cji Campylobacter jejuni subsp. jejuni IA3902 2012 GenBank
cjm Campylobacter jejuni subsp. jejuni M1 2012 GenBank
cjs Campylobacter jejuni subsp. jejuni S3 2012 GenBank
cjp Campylobacter jejuni subsp. jejuni PT14 2012 GenBank
cjej Campylobacter jejuni subsp. jejuni 00-2426 2013 GenBank
cjeu Campylobacter jejuni subsp. jejuni 00-2538 2013 GenBank
cjen Campylobacter jejuni subsp. jejuni 00-2544 2013 GenBank
cjei Campylobacter jejuni subsp. jejuni 00-2425 2013 GenBank
cjer Campylobacter jejuni subsp. jejuni R14 2014 GenBank
cjv Campylobacter jejuni subsp. jejuni MTVDSCj20 2014 GenBank
cjy Campylobacter jejuni subsp. jejuni YH001 2015 GenBank
cjq Campylobacter jejuni subsp. jejuni 35925B2 2015 GenBank
cjl Campylobacter jejuni subsp. jejuni 00-1597 2015 GenBank
cjw Campylobacter jejuni subsp. jejuni 00-6200 2015 GenBank
cjr Campylobacter jejuni RM1221 2005 GenBank
cjd Campylobacter jejuni subsp. doylei 269.97 2007 GenBank
cjz Campylobacter jejuni 32488 2013 GenBank
cjx Campylobacter jejuni 4031 2013 GenBank
cff Campylobacter fetus subsp. fetus 82-40 2006 GenBank
cft Campylobacter fetus subsp. fetus 04/554 2014 GenBank
cfv Campylobacter fetus subsp. venerealis cfvi03/293 2014 GenBank
cfx Campylobacter fetus subsp. venerealis 97/608 2014 GenBank
cfz Campylobacter fetus subsp. venerealis 84-112 2015 GenBank
camp Campylobacter fetus subsp. testudinum 03-427 2013 GenBank
cfp Campylobacter fetus subsp. testudinum pet-3 2015 GenBank
ccv Campylobacter curvus 2007 GenBank
cha Campylobacter hominis 2007 GenBank
cco Campylobacter concisus 13826 2007 GenBank
ccoc Campylobacter concisus ATCC 33237 2017 GenBank
cla Campylobacter lari RM2100 2009 GenBank
clr Campylobacter lari RM16701 2015 GenBank
clm Campylobacter lari RM16712 2015 GenBank
clq Campylobacter lari CCUG 22395 2015 GenBank
cln Campylobacter lari NCTC 11845 2015 GenBank
cll Campylobacter lari subsp. concheus LMG 11760 2015 GenBank
ccol Campylobacter coli 76339 2013 GenBank
ccc Campylobacter coli CVM N29710 2013 GenBank
ccq Campylobacter coli 15-537360 2013 GenBank
ccf Campylobacter coli RM1875 2014 GenBank
ccy Campylobacter coli RM4661 2014 GenBank
ccoi Campylobacter coli RM5611 2014 GenBank
ccof Campylobacter coli FB1 2015 GenBank
ccoo Campylobacter coli OR12 2016 GenBank
caj Campylobacter iguaniorum 2014 GenBank
cis Campylobacter insulaenigrae 2015 GenBank
cvo Campylobacter volucris 2015 GenBank
cpel Campylobacter peloridis 2015 GenBank
camr Campylobacter sp. RM16704 2015 GenBank
csm Campylobacter subantarcticus LMG 24374 2015 GenBank
csf Campylobacter subantarcticus LMG 24377 2015 GenBank
cgra Campylobacter gracilis 2015 GenBank
cure Campylobacter ureolyticus 2015 GenBank
chyo Campylobacter hyointestinalis 2017 GenBank
chv Campylobacter helveticus 2017 GenBank
cspf Campylobacter sputorum 2017 GenBank
cpin Campylobacter pinnipediorum 2017 GenBank
ccun Campylobacter cuniculorum 2017 GenBank
clx Campylobacter lanienae 2017 GenBank
cavi Campylobacter avium 2018 GenBank
chw Campylobacter hepaticus 2018 GenBank
Arcobacter abu Arcobacter butzleri RM4018 2007 GenBank
abt Arcobacter butzleri ED-1 2012 GenBank
abl Arcobacter butzleri 7h1h 2013 GenBank
ant Arcobacter nitrofigilis 2010 GenBank
arc Arcobacter sp. L 2012 GenBank
alp Arcobacter sp. LPB0137 2017 GenBank
Sulfurospirillum sdl Sulfurospirillum deleyianum 2009 GenBank
sba Sulfurospirillum barnesii 2012 GenBank
smul Sulfurospirillum multivorans 2014 GenBank
shal Sulfurospirillum halorespirans 2016 GenBank
suls Sulfurospirillum sp. SL2-1 2017 GenBank
sulj Sulfurospirillum sp. JPD-1 2017 GenBank
Nitratifractor nsa Nitratifractor salsuginis 2011 GenBank
Nitratiruptor nis Nitratiruptor sp. SB155-2 2007 GenBank
Sulfurovum sun Sulfurovum sp. NBC37-1 2007 GenBank
slh Sulfurovum lithotrophicum 2015 GenBank
Nautilia nam Nautilia profundicola 2009 GenBank
Deltaproteobacteria Geobacter gsu Geobacter sulfurreducens PCA 2003 RefSeq
gsk Geobacter sulfurreducens KN400 2012 GenBank
gme Geobacter metallireducens 2005 GenBank
gur Geobacter uraniireducens 2007 GenBank
glo Geobacter lovleyi 2008 GenBank
gbm Geobacter bemidjiensis 2008 GenBank
geo Geobacter daltonii FRC-32 2009 GenBank
gem Geobacter sp. M21 2009 GenBank
geb Geobacter sp. M18 2011 GenBank
gpi Geobacter pickeringii 2015 GenBank
gao Geobacter anodireducens 2016 GenBank
Geoalkalibacter gsb Geoalkalibacter subterraneus 2015 GenBank
Pelobacter pca Pelobacter carbinolicus 2005 GenBank
ppd Pelobacter propionicus 2006 GenBank
pace Pelobacter acetylenicus 2017 GenBank
pef Pelobacter sp. SFB93 2017 GenBank
Desulfuromonas des Desulfuromonas soudanensis 2015 GenBank
deu Desulfuromonas sp. DDH964 2016 GenBank
Desulfovibrio dvu Desulfovibrio vulgaris Hildenborough 2004 RefSeq
dvl Desulfovibrio vulgaris DP4 2007 GenBank
dvm Desulfovibrio vulgaris Miyazaki F 2009 GenBank
dvg Desulfovibrio vulgaris RCH1 2012 GenBank
dde Desulfovibrio alaskensis 2005 GenBank
dds Desulfovibrio desulfuricans ATCC 27774 2009 GenBank
ddn Desulfovibrio desulfuricans ND132 2012 GenBank
dma Desulfovibrio magneticus 2009 GenBank
dsa Desulfovibrio salexigens 2009 GenBank
daf Desulfovibrio africanus 2012 GenBank
dhy Desulfovibrio hydrothermalis 2013 GenBank
dgg Desulfovibrio gigas 2013 GenBank
dfi Desulfovibrio fairfieldensis 2016 GenBank
dpg Desulfovibrio piger 2017 GenBank
def Desulfovibrio sp. G11 2017 GenBank
dtr Candidatus Desulfovibrio trichonymphae 2018 GenBank
Pseudodesulfovibrio das Pseudodesulfovibrio aespoeensis 2011 GenBank
dpi Pseudodesulfovibrio piezophilus 2013 GenBank
dej Pseudodesulfovibrio indicus 2016 GenBank
pprf Pseudodesulfovibrio profundus 2018 GenBank
Lawsonia lip Lawsonia intracellularis PHE/MN1-00 2006 GenBank
lir Lawsonia intracellularis N343 2013 GenBank
Desulfomicrobium dba Desulfomicrobium baculatum 2009 GenBank
doa Desulfomicrobium orale 2016 GenBank
Desulfohalobium drt Desulfohalobium retbaense 2009 GenBank
Desulfotalea dps Desulfotalea psychrophila 2004 GenBank
Desulfurivibrio dak Desulfurivibrio alkaliphilus 2010 GenBank
Desulfobulbus dpr Desulfobulbus propionicus 2011 GenBank
deo Desulfobulbus sp. ORNL 2018 GenBank
Desulfocapsa dsf Desulfocapsa sulfexigens 2013 GenBank
Desulfococcus dol Desulfococcus oleovorans 2007 GenBank
dml Desulfococcus multivorans 2016 GenBank
Desulfatibacillum dal Desulfatibacillum alkenivorans 2009 GenBank
Desulfobacterium dat Desulfobacterium autotrophicum 2009 GenBank
Desulfobacula dto Desulfobacula toluolica 2012 GenBank
Anaeromyxobacter ade Anaeromyxobacter dehalogenans 2CP-C 2006 GenBank
acp Anaeromyxobacter dehalogenans 2CP-1 2009 GenBank
afw Anaeromyxobacter sp. Fw109-5 2007 GenBank
ank Anaeromyxobacter sp. K 2008 GenBank
Myxococcus mxa Myxococcus xanthus 2006 GenBank
mfu Myxococcus fulvus 2011 GenBank
msd Myxococcus stipitatus 2013 GenBank
mym Myxococcus hansupus 2016 GenBank
mmas Myxococcus macrosporus 2017 GenBank
Corallococcus ccx Corallococcus coralloides 2012 GenBank
Stigmatella sur Stigmatella aurantiaca 2011 GenBank
Archangium age Archangium gephyra 2015 GenBank
Melittangium mbd Melittangium boletus 2017 GenBank
Cystobacter cfus Cystobacter fuscus 2017 GenBank
Vulgatibacter vin Vulgatibacter incomptus 2015 GenBank
Sorangium scl Sorangium cellulosum So ce56 2007 GenBank
scu Sorangium cellulosum So0157-2 2013 GenBank
Chondromyces ccro Chondromyces crocatus 2015 GenBank
Sandaracinus samy Sandaracinus amylolyticus 2015 GenBank
Labilithrix llu Labilithrix luteola 2015 GenBank
Minicystis mrm Minicystis rosea 2017 GenBank
Haliangium hoh Haliangium ochraceum 2009 GenBank
Syntrophus sat Syntrophus aciditrophicus 2006 GenBank
Desulfobacca dao Desulfobacca acetoxidans 2011 GenBank
Desulfomonile dti Desulfomonile tiedjei 2012 GenBank
Syntrophobacter sfu Syntrophobacter fumaroxidans 2006 GenBank
Desulfarculus dbr Desulfarculus baarsii 2010 GenBank
Hippea hmr Hippea maritima 2011 GenBank
Desulfurella dav Desulfurella acetivorans 2014 GenBank
Babela dpb Candidatus Babela massiliensis 2013 GenBank
Bradymonas bsed Bradymonas sediminis 2018 GenBank
Bdellovibrio bba Bdellovibrio bacteriovorus HD100 2004 GenBank
bbat Bdellovibrio bacteriovorus Tiberius 2012 GenBank
bbw Bdellovibrio bacteriovorus W 2014 GenBank
bbac Bdellovibrio bacteriovorus 109J 2014 GenBank
bex Bdellovibrio exovorus 2013 GenBank
Halobacteriovorax bmx Halobacteriovorax marinus 2012 GenBank
Bacteriovorax bsto Bacteriovorax stolpii 2018 GenBank
Alphaproteobacteria Rickettsia rpr Rickettsia prowazekii Madrid E 1998 RefSeq
rpo Rickettsia prowazekii BuV67-CWPP 2012 GenBank
rpw Rickettsia prowazekii Chernikova 2012 GenBank
rpz Rickettsia prowazekii Dachau 2012 GenBank
rpg Rickettsia prowazekii GvV257 2012 GenBank
rps Rickettsia prowazekii Katsinyian 2012 GenBank
rpv Rickettsia prowazekii RpGvF24 2012 GenBank
rpq Rickettsia prowazekii Rp22 2012 GenBank
rpl Rickettsia prowazekii Breinl 2013 GenBank
rpn Rickettsia prowazekii NMRC Madrid E 2013 GenBank
rty Rickettsia typhi Wilmington 2004 GenBank
rtt Rickettsia typhi TH1527 2012 GenBank
rtb Rickettsia typhi B9991CWPP 2012 GenBank
rcm Rickettsia canadensis McKiel 2007 GenBank
rcc Rickettsia canadensis CA410 2012 GenBank
rbe Rickettsia bellii RML369-C 2006 GenBank
rbo Rickettsia bellii OSU 85-389 2007 GenBank
rco Rickettsia conorii 2001 GenBank
rfe Rickettsia felis 2005 GenBank
rak Rickettsia akari 2007 GenBank
rri Rickettsia rickettsii Sheila Smith 2007 GenBank
rrj Rickettsia rickettsii Iowa 2008 GenBank
rra Rickettsia rickettsii Arizona 2012 GenBank
rrc Rickettsia rickettsii Colombia 2012 GenBank
rrh Rickettsia rickettsii Hauke 2012 GenBank
rrb Rickettsia rickettsii Brazil 2012 GenBank
rrn Rickettsia rickettsii Hino 2012 GenBank
rrp Rickettsia rickettsii Hlp#2 2012 GenBank
rrm Rickettsia rickettsii Morgan 2015 GenBank
rrr Rickettsia rickettsii R 2015 GenBank
rms Rickettsia massiliae MTU5 2007 GenBank
rmi Rickettsia massiliae AZT80 2012 GenBank
rpk Rickettsia peacockii 2009 GenBank
raf Rickettsia africae 2009 GenBank
rhe Rickettsia heilongjiangensis 2011 GenBank
rja Rickettsia japonica 2011 GenBank
rsv Rickettsia slovaca 13-B 2012 GenBank
rsw Rickettsia slovaca D-CWPP 2012 GenBank
rph Rickettsia philipii 2012 GenBank
rau Rickettsia australis 2012 GenBank
rmo Rickettsia montanensis 2012 GenBank
rpp Rickettsia parkeri 2012 GenBank
rre Rickettsia rhipicephali 2012 GenBank
ram Rickettsia amblyommatis GAT-30V 2012 GenBank
rab Rickettsia amblyommatis Ac37 2016 GenBank
rmc Rickettsia monacensis 2015 GenBank
Orientia ots Orientia tsutsugamushi Boryong 2007 GenBank
ott Orientia tsutsugamushi Ikeda 2008 GenBank
Phycorickettsia ptc Candidatus Phycorickettsia trachydisci 2018 GenBank
Wolbachia wol Wolbachia wMel (Drosophila melanogaster) 2004 GenBank
wri Wolbachia wRi (Drosophila simulans) 2009 GenBank
wen Wolbachia wHa (Drosophila simulans) 2013 GenBank
wed Wolbachia wNo (Drosophila simulans) 2013 GenBank
wpi Wolbachia wPip (Culex quinquefasciatus) 2008 GenBank
wbm Wolbachia wBm (Brugia malayi) 2005 GenBank
woo Wolbachia wOo (Onchocerca ochengi) 2012 GenBank
wcl Wolbachia wCle (Cimex lectularius) 2015 GenBank
Anaplasma ama Anaplasma marginale St. Maries 2004 GenBank
amf Anaplasma marginale Florida 2009 GenBank
amw Anaplasma marginale Dawn 2013 GenBank
amp Anaplasma marginale Gypsy Plains 2013 GenBank
acn Anaplasma centrale 2009 GenBank
aph Anaplasma phagocytophilum HZ 2006 GenBank
apy Anaplasma phagocytophilum HZ2 2013 GenBank
apd Anaplasma phagocytophilum Dog2 2013 GenBank
apha Anaplasma phagocytophilum JM 2013 GenBank
Ehrlichia eru Ehrlichia ruminantium Welgevonden (South Africa) 2005 GenBank
erw Ehrlichia ruminantium Welgevonden (France) 2005 GenBank
erg Ehrlichia ruminantium Gardel 2005 GenBank
ecn Ehrlichia canis 2005 GenBank
ech Ehrlichia chaffeensis Arkansas 2006 GenBank
echa Ehrlichia chaffeensis Heartland 2014 GenBank
echj Ehrlichia chaffeensis Jax 2014 GenBank
echl Ehrlichia chaffeensis Liberty 2014 GenBank
echs Ehrlichia chaffeensis Osceola 2014 GenBank
echv Ehrlichia chaffeensis Saint Vincent 2014 GenBank
echw Ehrlichia chaffeensis Wakulla 2014 GenBank
echp Ehrlichia chaffeensis West Paces 2014 GenBank
emr Ehrlichia muris 2013 GenBank
ehh Ehrlichia sp. HF 2014 GenBank
Neorickettsia nse Neorickettsia sennetsu 2006 GenBank
nri Neorickettsia risticii 2009 GenBank
nhm Neorickettsia helminthoeca 2014 GenBank
Midichloria mmn Candidatus Midichloria mitochondrii 2011 GenBank
Fokinia fso Candidatus Fokinia solitaria 2018 GenBank
Unclassified Rickettsiales rbt Rickettsiales bacterium Ac37b 2014 GenBank
Paracaedibacter paca Candidatus Paracaedibacter acanthamoebae 2014 GenBank
Paracaedimonas caq Candidatus Paracaedimonas acanthamoebae 2014 GenBank
Nucleicultrix naf Candidatus Nucleicultrix amoebiphila 2017 GenBank
Unclassified Holosporaceae eaa Endosymbiont of Acanthamoeba sp. UWC8 2014 GenBank
Mesorhizobium mlo Mesorhizobium japonicum MAFF 303099 2000 GenBank
mln Mesorhizobium loti NZP2037 2017 GenBank
mci Mesorhizobium ciceri (biovar Biserrulae) 2011 RefSeq
mop Mesorhizobium opportunistum 2011 GenBank
mam Mesorhizobium australicum 2013 GenBank
mamo Mesorhizobium amorphae 2016 GenBank
meso Mesorhizobium sp. B7 2017 GenBank
mesw Mesorhizobium sp. WSM1497 2017 GenBank
Chelativorans mes Chelativorans sp. BNC1 2006 GenBank
Hoeflea hoe Hoeflea sp. IMCC20628 2015 GenBank
Aminobacter aak Aminobacter aminovorans 2016 GenBank
amih Aminobacter sp. MSH1 2018 GenBank
Phyllobacterium pht Phyllobacterium zundukense 2017 GenBank
Parvibaculum pla Parvibaculum lavamentivorans 2007 GenBank
Unclassified Rhodobiaceae rbs Rhodobiaceae bacterium SMS8 2018 GenBank
Sinorhizobium sme Sinorhizobium meliloti 1021 2001 RefSeq
smk Sinorhizobium meliloti AK83 2011 GenBank
smq Sinorhizobium meliloti BL225C 2012 GenBank
smx Sinorhizobium meliloti SM11 2012 GenBank
smi Sinorhizobium meliloti Rm41 2012 GenBank
smeg Sinorhizobium meliloti GR4 2013 GenBank
smel Sinorhizobium meliloti 2011 2013 GenBank
smer Sinorhizobium meliloti RMO17 2014 GenBank
smd Sinorhizobium medicae 2007 RefSeq
rhi Sinorhizobium fredii NGR234 2009 RefSeq
sfh Sinorhizobium fredii HH103 2012 GenBank
sfd Sinorhizobium fredii USDA 257 2012 GenBank
six Sinorhizobium sp. RAC02 2016 GenBank
same Sinorhizobium americanum 2017 GenBank
sino Sinorhizobium sp. CCBAU 05631 2017 GenBank
Ensifer ead Ensifer adhaerens OV14 2014 GenBank
eah Ensifer adhaerens Casida A 2016 GenBank
esj Ensifer sojae 2017 GenBank
Agrobacterium atu Agrobacterium fabrum 2001 RefSeq
ara Agrobacterium radiobacter 2009 GenBank
atf Agrobacterium tumefaciens Ach5 2015 GenBank
ata Agrobacterium tumefaciens S33 2016 GenBank
avi Agrobacterium vitis 2009 GenBank
agr Agrobacterium sp. H13-3 2011 GenBank
agc Agrobacterium sp. RAC06 2016 GenBank
aro Agrobacterium rhizogenes 2017 GenBank
Rhizobium ret Rhizobium etli CFN 42 2006 GenBank
rec Rhizobium etli CIAT 652 2008 GenBank
rel Rhizobium etli bv. mimosae Mim1 2013 GenBank
rep Rhizobium etli bv. phaseoli IE4803 2015 GenBank
rei Rhizobium sp. IE4771 2014 GenBank
rle Rhizobium leguminosarum bv. viciae 3841 2006 GenBank
rlt Rhizobium leguminosarum bv. trifolii WSM2304 2008 GenBank
rlg Rhizobium leguminosarum bv. trifolii WSM1325 2009 GenBank
rlb Rhizobium leguminosarum bv. trifolii WSM1689 2014 GenBank
rlu Rhizobium leguminosarum bv. trifolii CB782 2014 GenBank
rtr Rhizobium tropici 2013 GenBank
rir Rhizobium sp. IRBG74 2013 GenBank
rhl Rhizobium favelukesii 2014 GenBank
rga Rhizobium gallicum 2015 GenBank
rhn Rhizobium sp. N1341 2016 GenBank
rpha Rhizobium phaseoli 2017 GenBank
rht Rhizobium sp. NT-26 2017 GenBank
rhx Rhizobium sp. N731 2017 GenBank
rhv Rhizobium sp. S41 2018 GenBank
rhk Rhizobium sp. Kim5 2018 GenBank
Neorhizobium ngl Neorhizobium galegae bv. officinalis bv. officinalis HAMBI 1141 2014 GenBank
ngg Neorhizobium galegae bv. orientalis HAMBI 540 2014 GenBank
neo Neorhizobium sp. SOG26 2018 GenBank
Liberibacter las Candidatus Liberibacter asiaticus psy62 2009 GenBank
laa Candidatus Liberibacter asiaticus gxpsy 2013 GenBank
lat Candidatus Liberibacter asiaticus Ishi-1 2015 GenBank
lso Candidatus Liberibacter solanacearum 2010 GenBank
lcc Liberibacter crescens 2012 GenBank
lar Candidatus Liberibacter americanus 2013 GenBank
lau Candidatus Liberibacter africanus 2015 GenBank
Shinella shz Shinella sp. HZN7 2016 GenBank
Brucella bme Brucella melitensis bv. 1 16M 2002 GenBank
bmel Brucella melitensis bv. 1 16M 2015 GenBank
bmi Brucella melitensis ATCC 23457 2009 GenBank
bmz Brucella melitensis M28 2012 GenBank
bmg Brucella melitensis M5-90 2012 GenBank
bmw Brucella melitensis NI 2012 GenBank
bmee Brucella melitensis bv. 3 Ether 2014 GenBank
bmf Brucella abortus 2308 2005 GenBank
bmb Brucella abortus bv. 1 9-941 2005 GenBank
bmc Brucella abortus S19 2008 GenBank
baa Brucella abortus A13334 2012 GenBank
babo Brucella abortus bv. 2 86/8/59 2014 GenBank
babr Brucella abortus bv. 6 870 2014 GenBank
babt Brucella abortus 63 75 2014 GenBank
babb Brucella abortus BDW 2014 GenBank
babu Brucella abortus bv. 9 C68 2014 GenBank
babs Brucella abortus BER 2015 GenBank
babc Brucella abortus NCTC 10505 2015 GenBank
bms Brucella suis 1330 2002 GenBank
bsi Brucella suis 1330 2012 GenBank
bsf Brucella suis bv. 1 2014 GenBank
bsui Brucella suis bv. 2 Bs143CITA 2014 GenBank
bsup Brucella suis bv. 2 PT09143 2014 GenBank
bsuv Brucella suis bv. 2 PT09172 2014 GenBank
bsuc Brucella suis bv. 2 Bs364CITA 2015 GenBank
bmt Brucella suis ATCC 23445 2007 GenBank
bsz Brucella suis bv. 3 2014 GenBank
bsv Brucella suis VBI22 2012 GenBank
bsw Brucella suis ZW043 2014 GenBank
bsg Brucella suis ZW046 2014 GenBank
bov Brucella ovis 2007 GenBank
bcs Brucella canis ATCC 23365 2007 GenBank
bsk Brucella canis HSK A52141 2012 GenBank
bol Brucella canis Oliveri 2014 GenBank
bcar Brucella canis RM6/66 2014 GenBank
bcas Brucella canis SVA13 2014 GenBank
bmr Brucella microti 2009 GenBank
bpp Brucella pinnipedialis B2/94 2011 GenBank
bpv Brucella pinnipedialis 6/566 2014 GenBank
bcet Brucella ceti TE10759-12 2013 GenBank
bcee Brucella ceti TE28753-12 2013 GenBank
bvl Brucella vulpis 2016 GenBank
Ochrobactrum oan Ochrobactrum anthropi ATCC 49188 2007 GenBank
oah Ochrobactrum anthropi OAB 2014 GenBank
ops Ochrobactrum pseudogrignonense 2016 GenBank
och Ochrobactrum sp. A44 2017 GenBank
Bradyrhizobium bja Bradyrhizobium diazoefficiens USDA 110 2002 RefSeq
bju Bradyrhizobium japonicum USDA 6 2012 GenBank
bjp Bradyrhizobium japonicum E109 2015 GenBank
bra Bradyrhizobium sp. ORS 278 2007 GenBank
bbt Bradyrhizobium sp. BTAi1 2007 GenBank
brs Bradyrhizobium sp. S23321 2012 GenBank
aol Bradyrhizobium oligotrophicum 2013 GenBank
brc Bradyrhizobium sp. CCGE-LA001 2016 GenBank
brad Bradyrhizobium sp. BF49 2016 GenBank
bic Bradyrhizobium icense 2016 GenBank
bro Bradyrhizobium sp. ORS 285 2017 GenBank
brk Bradyrhizobium sp. SK17 2018 GenBank
bot Bradyrhizobium ottawaense 2018 GenBank
Rhodopseudomonas rpa Rhodopseudomonas palustris CGA009 2003 GenBank
rpb Rhodopseudomonas palustris HaA2 2006 GenBank
rpc Rhodopseudomonas palustris BisB18 2006 GenBank
rpd Rhodopseudomonas palustris BisB5 2006 GenBank
rpe Rhodopseudomonas palustris BisA53 2006 GenBank
rpt Rhodopseudomonas palustris TIE-1 2008 GenBank
rpx Rhodopseudomonas palustris DX-1 2011 GenBank
Nitrobacter nwi Nitrobacter winogradskyi 2005 GenBank
nha Nitrobacter hamburgensis 2006 GenBank
Oligotropha oca Oligotropha carboxidovorans OM5 (Mississippi) 2008 GenBank
ocg Oligotropha carboxidovorans OM5 (Goettingen) 2011 GenBank
oco Oligotropha carboxidovorans OM4 2012 GenBank
Bosea bop Bosea sp. PAMC 26642 2016 GenBank
bos Bosea sp. RAC05 2016 GenBank
bvv Bosea vaviloviae 2016 GenBank
Variibacter vgo Variibacter gotjawalensis 2018 GenBank
Bartonella bhe Bartonella henselae Houston-1 2004 GenBank
bhn Bartonella henselae BM1374163 2014 GenBank
bhs Bartonella henselae BM1374165 2014 GenBank
bqu Bartonella quintana Toulouse 2004 GenBank
bqr Bartonella quintana RM-11 2012 GenBank
bbk Bartonella bacilliformis 2007 GenBank
btr Bartonella tribocorum CIP 105476 2007 GenBank
btx Bartonella tribocorum BM1374166 2014 GenBank
bgr Bartonella grahamii 2009 GenBank
bcd Bartonella clarridgeiae 2011 GenBank
baus Bartonella australis 2013 GenBank
bvn Bartonella vinsonii 2013 GenBank
banc Bartonella ancashensis 2016 GenBank
bapi Bartonella apis 2017 GenBank
bart Bartonella sp. JB15 2017 GenBank
bara Bartonella sp. A1379B 2017 GenBank
barw Bartonella sp. WD16.2 2017 GenBank
barr Bartonella sp. Raccoon60 2018 GenBank
baro Bartonella sp. 1-1C 2018 GenBank
barj Bartonella sp. JB63 2018 GenBank
Xanthobacter xau Xanthobacter autotrophicus 2007 GenBank
Azorhizobium azc Azorhizobium caulinodans 2007 GenBank
Starkeya sno Starkeya novella 2010 GenBank
Methylorubrum mex Methylorubrum extorquens PA1 2007 GenBank
mea Methylorubrum extorquens AM1 2009 GenBank
mdi Methylorubrum extorquens DM4 2009 GenBank
mch Methylorubrum extorquens CM4 2008 GenBank
mpo Methylorubrum populi 2008 GenBank
mza Methylorubrum zatmanii 2017 GenBank
Methylobacterium mrd Methylobacterium radiotolerans 2008 GenBank
met Methylobacterium sp. 4-46 2008 GenBank
mno Methylobacterium nodulans 2009 GenBank
mor Methylobacterium oryzae 2014 GenBank
meta Methylobacterium sp. AMS5 2016 GenBank
maqu Methylobacterium aquaticum 2016 GenBank
mphy Methylobacterium phyllosphaerae 2017 GenBank
mee Methylobacterium sp. PR1016A 2017 GenBank
metd Methylobacterium sp. DM1 2018 GenBank
metx Methylobacterium sp. XJLM 2018 GenBank
Microvirga moc Microvirga ossetica 2017 GenBank
miv Microvirga sp. 17 mud 1-3 2018 GenBank
Beijerinckia bid Beijerinckia indica 2008 GenBank
Methylocella msl Methylocella silvestris 2008 GenBank
Chelatococcus chel Chelatococcus sp. CO-6 2015 GenBank
cdq Chelatococcus daeguensis 2017 GenBank
Hyphomicrobium hdn Hyphomicrobium denitrificans ATCC 51888 2010 GenBank
hdt Hyphomicrobium denitrificans 1NES1 2013 GenBank
hmc Hyphomicrobium sp. MC1 2011 GenBank
hni Hyphomicrobium nitrativorans 2013 GenBank
Rhodomicrobium rva Rhodomicrobium vannielii 2010 GenBank
Pelagibacterium phl Pelagibacterium halotolerans 2011 GenBank
Filomicrobium fil Candidatus Filomicrobium marinum W 2015 GenBank
fiy Candidatus Filomicrobium marinum Y 2015 GenBank
Devosia deq Devosia sp. H5989 2015 GenBank
dei Devosia sp. I507 2018 GenBank
Blastochloris bvr Blastochloris viridis 2016 GenBank
Rhodoplanes rhz Rhodoplanes sp. Z2-YC6860 2016 GenBank
Maritalea mmyr Maritalea myrionectae 2018 GenBank
Methylocystis msc Methylocystis sp. SC2 2012 GenBank
mbry Methylocystis bryophila 2017 GenBank
Methylosinus mtw Methylosinus trichosporium 2017 GenBank
Martelella mey Martelella endophytica 2015 GenBank
maad Martelella sp. AD-3 2016 GenBank
mmed Martelella mediterranea 2017 GenBank
Aureimonas aua Aureimonas sp. AU20 2016 GenBank
Breoghania brn Breoghania sp. L-A4 2018 GenBank
Hodgkinia hci Candidatus Hodgkinia cicadicola Dsem 2009 GenBank
hct Candidatus Hodgkinia cicadicola TETULN 2014 GenBank
hcc Candidatus Hodgkinia cicadicola TETUND1 2015 GenBank
hcd Candidatus Hodgkinia cicadicola TETUND2 2015 GenBank
Methyloceanibacter mcg Methyloceanibacter caenitepidi 2015 GenBank
Tokpelaia thd Candidatus Tokpelaia hoelldoblerii 2017 GenBank
Pseudorhodoplanes psin Pseudorhodoplanes sinuspersici 2017 GenBank
Hartmannibacter hdi Hartmannibacter diazotrophicus 2017 GenBank
Unclassified Rhizobiales rbm Rhizobiales bacterium NRL2 2016 GenBank
Caulobacter ccr Caulobacter vibrioides CB15 2001 RefSeq
ccs Caulobacter vibrioides NA1000 2009 RefSeq
cak Caulobacter sp. K31 2008 GenBank
cse Caulobacter segnis 2010 GenBank
chq Caulobacter henricii 2016 GenBank
cmb Caulobacter mirabilis 2017 GenBank
Phenylobacterium pzu Phenylobacterium zucineum 2008 GenBank
phb Phenylobacterium sp. HYN0004 2018 GenBank
Brevundimonas bsb Brevundimonas subvibrioides 2010 GenBank
brd Brevundimonas sp. DS20 2016 GenBank
bne Brevundimonas naejangsanensis 2016 GenBank
brg Brevundimonas sp. GW460-12-10-14-LB2 2016 GenBank
brl Brevundimonas sp. LM2 2017 GenBank
bvc Brevundimonas vesicularis 2017 GenBank
Asticcacaulis aex Asticcacaulis excentricus 2011 GenBank
Unclassified Caulobacteraceae cbot Caulobacteraceae bacterium OTSz_A_272 2016 GenBank
Ruegeria sil Ruegeria pomeroyi 2004 GenBank
sit Ruegeria sp. TM1040 2006 GenBank
rue Ruegeria sp. NKC1-1 2018 GenBank
rua Ruegeria sp. AD91A 2018 GenBank
Epibacterium rmb Epibacterium mobile 2016 GenBank
Rhodobacter rsp Rhodobacter sphaeroides 2.4.1 2005 RefSeq
rsh Rhodobacter sphaeroides ATCC 17029 2007 GenBank
rsq Rhodobacter sphaeroides ATCC 17025 2007 GenBank
rsk Rhodobacter sphaeroides KD131 2009 GenBank
rcp Rhodobacter capsulatus 2010 GenBank
rhp Rhodobacter sp. LPB0142 2017 GenBank
Jannaschia jan Jannaschia sp. CCS1 2006 GenBank
Roseobacter rde Roseobacter denitrificans 2006 GenBank
rli Roseobacter litoralis 2011 GenBank
Paracoccus pde Paracoccus denitrificans 2006 GenBank
pami Paracoccus aminophilus 2013 GenBank
pye Paracoccus yeei 2017 GenBank
pcon Paracoccus contaminans 2017 GenBank
pzh Paracoccus zhejiangensis 2018 GenBank
paro Paracoccus sp. BM15 2018 GenBank
paru Paracoccus sp. CBA4604 2018 GenBank
pamn Paracoccus aminovorans 2018 GenBank
pmut Paracoccus mutanolyticus 2018 GenBank
Dinoroseobacter dsh Dinoroseobacter shibae 2007 GenBank
Ketogulonicigenium kvu Ketogulonicigenium vulgare Y25 2010 GenBank
kvl Ketogulonicigenium vulgare WSH-001 2012 RefSeq
kro Ketogulonicigenium robustum 2017 GenBank
Pseudovibrio psf Pseudovibrio sp. FO-BEG1 2012 GenBank
Phaeobacter pga Phaeobacter inhibens DSM 17395 2012 GenBank
pgl Phaeobacter inhibens 2.10 2012 GenBank
pgd Phaeobacter gallaeciensis DSM 26640 2013 GenBank
php Phaeobacter porticola 2017 GenBank
ppic Phaeobacter piscinae 2017 GenBank
phq Phaeobacter sp. LSS9 2018 GenBank
Octadecabacter oat Octadecabacter antarcticus 2013 GenBank
oar Octadecabacter arcticus 2013 GenBank
otm Octadecabacter temperatus 2015 GenBank
Leisingera lmd Leisingera methylohalidivorans 2013 GenBank
Roseibacterium red Roseibacterium elongatum 2014 GenBank
Planktomarina ptp Planktomarina temperata 2014 GenBank
Celeribacter cid Celeribacter indicus 2015 GenBank
cmar Celeribacter marinus 2016 GenBank
ceh Celeribacter ethanolicus 2017 GenBank
cmag Celeribacter manganoxidans 2017 GenBank
Marinovum malg Marinovum algicola 2015 GenBank
Confluentimicrobium con Confluentimicrobium sp. EMB200-NS6 2016 GenBank
Rhodovulum rsu Rhodovulum sulfidophilum 2016 GenBank
rhm Rhodovulum sp. MB263 2017 GenBank
rhc Rhodovulum sp. P5 2017 GenBank
Pannonibacter pphr Pannonibacter phragmitetus 2016 GenBank
Halocynthiibacter hat Halocynthiibacter arcticus 2016 GenBank
Labrenzia lap Labrenzia sp. CP4 2016 GenBank
lagg Labrenzia aggregata 2017 GenBank
labr Labrenzia sp. VG12 2017 GenBank
Defluviimonas daa Defluviimonas alba 2016 GenBank
Yangia yan Yangia sp. CCB-MM3 2016 GenBank
ypac Yangia pacifica 2018 GenBank
Sulfitobacter suam Sulfitobacter sp. AM1-D1 2016 GenBank
spse Sulfitobacter pseudonitzschiae 2017 GenBank
sulz Sulfitobacter sp. SK012 2018