KEGG  Metabolic pathways - Xanthomonas citri pv. citri 306

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Module
  • Pathway modules
    • Carbohydrate metabolism
      • Central carbohydrate metabolism
        • M00001 Glycolysis (Embden-Meyerhof pathway)
        • M00002 Glycolysis, core module involving three-carbon compounds
        • M00003 Gluconeogenesis
        • M00307 Pyruvate oxidation
        • M00009 Citrate cycle (TCA cycle, Krebs cycle)
        • M00010 Citrate cycle, first carbon oxidation
        • M00011 Citrate cycle, second carbon oxidation
        • M00004 Pentose phosphate pathway (Pentose phosphate cycle)
        • M00006 Pentose phosphate pathway, oxidative phase
        • M00007 Pentose phosphate pathway, non-oxidative phase
        • M00580 Pentose phosphate pathway, archaea
        • M00005 PRPP biosynthesis
        • M00008 Entner-Doudoroff pathway
        • M00308 Semi-phosphorylative Entner-Doudoroff pathway
        • M00633 Semi-phosphorylative Entner-Doudoroff pathway
        • M00309 Non-phosphorylative Entner-Doudoroff pathway
      • Other carbohydrate metabolism
        • M00014 Glucuronate pathway (uronate pathway)
        • M00630 D-Galacturonate degradation (fungi)
        • M00631 D-Galacturonate degradation (bacteria)
        • M00061 D-Glucuronate degradation
        • M00081 Pectin degradation
        • M00632 Galactose degradation, Leloir pathway
        • M00552 D-galactonate degradation, De Ley-Doudoroff pathway
        • M00129 Ascorbate biosynthesis, animals
        • M00114 Ascorbate biosynthesis, plants
        • M00550 Ascorbate degradation
        • M00854 Glycogen biosynthesis
        • M00855 Glycogen degradation
        • M00565 Trehalose biosynthesis
        • M00549 Nucleotide sugar biosynthesis
        • M00554 Nucleotide sugar biosynthesis
        • M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes
        • M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis
        • M00012 Glyoxylate cycle
        • M00373 Ethylmalonyl pathway
        • M00740 Methylaspartate cycle
        • M00532 Photorespiration
        • M00013 Malonate semialdehyde pathway
        • M00741 Propanoyl-CoA metabolism
        • M00968 Pentose bisphosphate pathway (nucleoside degradation), archaea
        • M00130 Inositol phosphate metabolism
        • M00131 Inositol phosphate metabolism
        • M00132 Inositol phosphate metabolism
    • Energy metabolism
      • Carbon fixation
        • M00165 Reductive pentose phosphate cycle (Calvin cycle)
        • M00168 CAM (Crassulacean acid metabolism), dark
        • M00169 CAM (Crassulacean acid metabolism), light
        • M00172 C4-dicarboxylic acid cycle, NADP - malic enzyme type
        • M00171 C4-dicarboxylic acid cycle, NAD - malic enzyme type
        • M00170 C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
        • M00173 Reductive citrate cycle (Arnon-Buchanan cycle)
        • M00376 3-Hydroxypropionate bi-cycle
        • M00375 Hydroxypropionate-hydroxybutylate cycle
        • M00374 Dicarboxylate-hydroxybutyrate cycle
        • M00377 Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)
        • M00579 Phosphate acetyltransferase-acetate kinase pathway
        • M00620 Incomplete reductive citrate cycle
      • Methane metabolism
        • M00567 Methanogenesis
        • M00357 Methanogenesis
        • M00356 Methanogenesis
        • M00563 Methanogenesis
        • M00358 Coenzyme M biosynthesis
        • M00608 2-Oxocarboxylic acid chain extension
        • M00174 Methane oxidation, methanotroph
        • M00346 Formaldehyde assimilation, serine pathway
        • M00345 Formaldehyde assimilation, ribulose monophosphate pathway
        • M00344 Formaldehyde assimilation, xylulose monophosphate pathway
        • M00378 F420 biosynthesis, archaea
        • M00935 Methanofuran biosynthesis
        • M00422 Acetyl-CoA pathway
      • Nitrogen metabolism
      • Sulfur metabolism
        • M00176 Assimilatory sulfate reduction
        • M00596 Dissimilatory sulfate reduction
        • M00595 Thiosulfate oxidation by SOX complex
      • Photosynthesis
      • ATP synthesis
        • M00144 NADH:quinone oxidoreductase, prokaryotes
        • M00145 NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria
        • M00142 NADH:ubiquinone oxidoreductase, mitochondria
        • M00143 NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria
        • M00146 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex
        • M00147 NADH dehydrogenase (ubiquinone) 1 beta subcomplex
        • M00149 Succinate dehydrogenase, prokaryotes
        • M00150 Fumarate reductase, prokaryotes
        • M00148 Succinate dehydrogenase (ubiquinone)
        • M00162 Cytochrome b6f complex
        • M00151 Cytochrome bc1 complex respiratory unit
        • M00152 Cytochrome bc1 complex
        • M00154 Cytochrome c oxidase
        • M00155 Cytochrome c oxidase, prokaryotes
        • M00153 Cytochrome bd ubiquinol oxidase
        • M00417 Cytochrome o ubiquinol oxidase
        • M00416 Cytochrome aa3-600 menaquinol oxidase
        • M00156 Cytochrome c oxidase, cbb3-type
        • M00157 F-type ATPase, prokaryotes and chloroplasts
        • M00159 V/A-type ATPase, prokaryotes
    • Lipid metabolism
      • Fatty acid metabolism
        • M00082 Fatty acid biosynthesis, initiation
        • M00083 Fatty acid biosynthesis, elongation
        • M00873 Fatty acid biosynthesis in mitochondria, animals
        • M00874 Fatty acid biosynthesis in mitochondria, fungi
        • M00085 Fatty acid elongation in mitochondria
        • M00415 Fatty acid elongation in endoplasmic reticulum
        • M00086 beta-Oxidation, acyl-CoA synthesis
        • M00087 beta-Oxidation
        • M00861 beta-Oxidation, peroxisome, VLCFA
      • Sterol biosynthesis
        • M00101 Cholesterol biosynthesis
        • M00102 Ergocalciferol biosynthesis
        • M00917 Phytosterol biosynthesis
        • M00103 Cholecalciferol biosynthesis
        • M00104 Bile acid biosynthesis
        • M00106 Conjugated bile acid biosynthesis
        • M00862 beta-Oxidation, peroxisome
        • M00107 Steroid hormone biosynthesis
        • M00108 C21-Steroid hormone biosynthesis
        • M00109 C21-Steroid hormone biosynthesis
        • M00110 C19/C18-Steroid hormone biosynthesis
        • M00976 C19-Steroid hormone biosynthesis
        • M00977 C19-Steroid hormone biosynthesis (androgen backdoor pathway)
      • Lipid metabolism
        • M00088 Ketone body biosynthesis
        • M00089 Triacylglycerol biosynthesis
        • M00098 Acylglycerol degradation
        • M00090 Phosphatidylcholine (PC) biosynthesis
        • M00091 Phosphatidylcholine (PC) biosynthesis
        • M00092 Phosphatidylethanolamine (PE) biosynthesis
        • M00093 Phosphatidylethanolamine (PE) biosynthesis
        • M00094 Ceramide biosynthesis
        • M00066 Lactosylceramide biosynthesis
        • M00067 Sulfoglycolipids biosynthesis
        • M00099 Sphingosine biosynthesis
        • M00100 Sphingosine degradation
        • M00113 Jasmonic acid biosynthesis
    • Nucleotide metabolism
      • Purine metabolism
        • M00048 De novo purine biosynthesis
        • M00049 Adenine ribonucleotide biosynthesis
        • M00050 Guanine ribonucleotide biosynthesis
        • M00053 Deoxyribonucleotide biosynthesis
        • M00958 Adenine ribonucleotide degradation
        • M00959 Guanine ribonucleotide degradation
        • M00546 Purine degradation
      • Pyrimidine metabolism
        • M00051 De novo pyrimidine biosynthesis
        • M00052 Pyrimidine ribonucleotide biosynthesis
        • M00938 Pyrimidine deoxyribonucleotide biosynthesis
        • M00046 Pyrimidine degradation
        • M00939 Pyrimidine degradation
    • Amino acid metabolism
      • Serine and threonine metabolism
        • M00020 Serine biosynthesis
        • M00018 Threonine biosynthesis
        • M00621 Glycine cleavage system
        • M00555 Betaine biosynthesis
        • M00974 Betaine metabolism, animals
        • M00975 Betaine degradation, bacteria
        • M00033 Ectoine biosynthesis
        • M00919 Ectoine degradation
      • Cysteine and methionine metabolism
        • M00021 Cysteine biosynthesis
        • M00338 Cysteine biosynthesis
        • M00609 Cysteine biosynthesis
        • M00017 Methionine biosynthesis
        • M00034 Methionine salvage pathway
        • M00035 Methionine degradation
        • M00368 Ethylene biosynthesis
      • Branched-chain amino acid metabolism
        • M00019 Valine/isoleucine biosynthesis
        • M00535 Isoleucine biosynthesis
        • M00570 Isoleucine biosynthesis
        • M00432 Leucine biosynthesis
        • M00036 Leucine degradation
      • Lysine metabolism
        • M00016 Lysine biosynthesis, succinyl-DAP pathway
        • M00525 Lysine biosynthesis, acetyl-DAP pathway
        • M00526 Lysine biosynthesis, DAP dehydrogenase pathway
        • M00527 Lysine biosynthesis, DAP aminotransferase pathway
        • M00030 Lysine biosynthesis, AAA pathway
        • M00433 Lysine biosynthesis
        • M00031 Lysine biosynthesis, mediated by LysW
        • M00032 Lysine degradation
        • M00956 Lysine degradation, bacteria
        • M00957 Lysine degradation, bacteria
        • M00960 Lysine degradation, bacteria
      • Arginine and proline metabolism
        • M00028 Ornithine biosynthesis
        • M00763 Ornithine biosynthesis, mediated by LysW
        • M00844 Arginine biosynthesis
        • M00845 Arginine biosynthesis
        • M00029 Urea cycle
        • M00978 Ornithine-ammonia cycle
        • M00015 Proline biosynthesis
        • M00970 Proline degradation
        • M00972 Proline metabolism
        • M00047 Creatine pathway
        • M00879 Arginine succinyltransferase pathway
      • Polyamine biosynthesis
        • M00133 Polyamine biosynthesis
        • M00134 Polyamine biosynthesis
        • M00135 GABA biosynthesis, eukaryotes
        • M00136 GABA biosynthesis, prokaryotes
      • Histidine metabolism
        • M00026 Histidine biosynthesis
        • M00045 Histidine degradation
      • Aromatic amino acid metabolism
        • M00022 Shikimate pathway
        • M00023 Tryptophan biosynthesis
        • M00024 Phenylalanine biosynthesis
        • M00910 Phenylalanine biosynthesis
        • M00025 Tyrosine biosynthesis
        • M00040 Tyrosine biosynthesis
        • M00042 Catecholamine biosynthesis
        • M00043 Thyroid hormone biosynthesis
        • M00044 Tyrosine degradation
        • M00533 Homoprotocatechuate degradation
        • M00037 Melatonin biosynthesis, animals
        • M00936 Melatonin biosynthesis, plants
        • M00038 Tryptophan metabolism
      • Other amino acid metabolism
        • M00027 GABA (gamma-Aminobutyrate) shunt
        • M00369 Cyanogenic glycoside biosynthesis
        • M00118 Glutathione biosynthesis
        • M00947 D-Arginine racemization
        • M00948 Hydroxyproline degradation
        • M00949 Staphylopine biosynthesis
    • Glycan metabolism
      • Glycan biosynthesis
        • M00055 N-glycan precursor biosynthesis
        • M00072 N-glycosylation by oligosaccharyltransferase
        • M00073 N-glycan precursor trimming
        • M00074 N-glycan biosynthesis, high-mannose type
        • M00075 N-glycan biosynthesis, complex type
        • M00056 O-glycan biosynthesis, mucin type core
        • M00872 O-glycan biosynthesis, mannose type (core M3)
        • M00065 GPI-anchor biosynthesis, core oligosaccharide
        • M00070 Glycosphingolipid biosynthesis, lacto-series
        • M00071 Glycosphingolipid biosynthesis, neolacto-series
        • M00068 Glycosphingolipid biosynthesis, globo-series
        • M00069 Glycosphingolipid biosynthesis, ganglio series
      • Glycosaminoglycan metabolism
        • M00057 Glycosaminoglycan biosynthesis, linkage tetrasaccharide
        • M00058 Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
        • M00059 Glycosaminoglycan biosynthesis, heparan sulfate backbone
        • M00076 Dermatan sulfate degradation
        • M00077 Chondroitin sulfate degradation
        • M00078 Heparan sulfate degradation
        • M00079 Keratan sulfate degradation
      • Lipopolysaccharide metabolism
        • M00060 KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
        • M00866 KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
        • M00867 KDO2-lipid A modification pathway
        • M00063 CMP-KDO biosynthesis
        • M00064 ADP-L-glycero-D-manno-heptose biosynthesis
        • M00922 CMP-Neu5Ac biosynthesis
        • M00923 UDP-L-FucNAm biosynthesis
    • Metabolism of cofactors and vitamins
      • Cofactor and vitamin metabolism
        • M00127 Thiamine biosynthesis, prokaryotes
        • M00895 Thiamine biosynthesis, prokaryotes
        • M00896 Thiamine biosynthesis, archaea
        • M00897 Thiamine biosynthesis, plants
        • M00898 Thiamine biosynthesis
        • M00899 Thiamine salvage pathway
        • M00125 Riboflavin biosynthesis, plants and bacteria
        • M00911 Riboflavin biosynthesis, fungi
        • M00124 Pyridoxal-P biosynthesis
        • M00916 Pyridoxal-P biosynthesis
        • M00115 NAD biosynthesis
        • M00912 NAD biosynthesis
        • M00810 Nicotine degradation, pyridine pathway
        • M00811 Nicotine degradation, pyrrolidine pathway
        • M00622 Nicotinate degradation
        • M00119 Pantothenate biosynthesis
        • M00913 Pantothenate biosynthesis
        • M00120 Coenzyme A biosynthesis
        • M00914 Coenzyme A biosynthesis, archaea
        • M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway
        • M00123 Biotin biosynthesis
        • M00950 Biotin biosynthesis, BioU pathway
        • M00573 Biotin biosynthesis, BioI pathway
        • M00577 Biotin biosynthesis, BioW pathway
        • M00881 Lipoic acid biosynthesis, plants and bacteria
        • M00882 Lipoic acid biosynthesis, eukaryotes
        • M00883 Lipoic acid biosynthesis, animals and bacteria
        • M00884 Lipoic acid biosynthesis
        • M00126 Tetrahydrofolate biosynthesis
        • M00840 Tetrahydrofolate biosynthesis, mediated by ribA and trpF
        • M00841 Tetrahydrofolate biosynthesis, mediated by PTPS
        • M00842 Tetrahydrobiopterin biosynthesis
        • M00843 L-threo-Tetrahydrobiopterin biosynthesis
        • M00880 Molybdenum cofactor biosynthesis
        • M00140 C1-unit interconversion, prokaryotes
        • M00846 Siroheme biosynthesis
        • M00868 Heme biosynthesis, animals and fungi
        • M00121 Heme biosynthesis, plants and bacteria
        • M00926 Heme biosynthesis, bacteria
        • M00847 Heme biosynthesis, archaea
        • M00924 Cobalamin biosynthesis, anaerobic
        • M00925 Cobalamin biosynthesis, aerobic
        • M00122 Cobalamin biosynthesis
        • M00836 Coenzyme F430 biosynthesis
        • M00117 Ubiquinone biosynthesis, prokaryotes
        • M00128 Ubiquinone biosynthesis, eukaryotes
        • M00116 Menaquinone biosynthesis
        • M00930 Menaquinone biosynthesis, futalosine pathway
        • M00931 Menaquinone biosynthesis, modified futalosine pathway
        • M00932 Phylloquinone biosynthesis
        • M00112 Tocopherol/tocotorienol biosynthesis
        • M00933 Plastoquinone biosynthesis
    • Biosynthesis of terpenoids and polyketides
      • Terpenoid backbone biosynthesis
        • M00095 C5 isoprenoid biosynthesis, mevalonate pathway
        • M00849 C5 isoprenoid biosynthesis, mevalonate pathway, archaea
        • M00096 C5 isoprenoid biosynthesis, non-mevalonate pathway
        • M00364 C10-C20 isoprenoid biosynthesis, bacteria
      • Plant terpenoid biosynthesis
        • M00097 beta-Carotene biosynthesis
        • M00372 Abscisic acid biosynthesis
        • M00371 Castasterone biosynthesis
        • M00927 Gibberellin A12 biosynthesis
        • M00928 Gibberellin A4/A1 biosynthesis
        • M00929 Gibberellin A1 biosynthesis
      • Macrolide biosynthesis
        • M00773 Tylosin biosynthesis
        • M00934 Mycinamicin biosynthesis
        • M00774 Erythromycin biosynthesis
        • M00775 Oleandomycin biosynthesis
        • M00776 Pikromycin/methymycin biosynthesis
        • M00777 Avermectin biosynthesis
      • Enediyne biosynthesis
        • M00824 9-membered enediyne core biosynthesis
        • M00825 10-membered enediyne core biosynthesis
        • M00826 C-1027 benzoxazolinate moiety biosynthesis
        • M00827 C-1027 beta-amino acid moiety biosynthesis
        • M00828 Maduropeptin beta-hydroxy acid moiety biosynthesis
        • M00829 3,6-Dimethylsalicylyl-CoA biosynthesis
        • M00830 Neocarzinostatin naphthoate moiety biosynthesis
        • M00831 Kedarcidin 2-hydroxynaphthoate moiety biosynthesis
        • M00832 Kedarcidin 2-aza-3-chloro-beta-tyrosine moiety biosynthesis
        • M00834 Calicheamicin orsellinate moiety biosynthesis
        • M00833 Calicheamicin biosynthesis
      • Type II polyketide biosynthesis
        • M00778 Type II polyketide backbone biosynthesis
        • M00779 Dihydrokalafungin biosynthesis
        • M00780 Tetracycline/oxytetracycline biosynthesis
        • M00823 Chlortetracycline biosynthesis
        • M00781 Nogalavinone/aklavinone biosynthesis
        • M00782 Mithramycin biosynthesis
        • M00783 Tetracenomycin C/8-demethyltetracenomycin C biosynthesis
        • M00784 Elloramycin biosynthesis
      • Polyketide sugar unit biosynthesis
        • M00793 dTDP-L-rhamnose biosynthesis
        • M00794 dTDP-6-deoxy-D-allose biosynthesis
        • M00795 dTDP-beta-L-noviose biosynthesis
        • M00796 dTDP-D-mycaminose biosynthesis
        • M00797 dTDP-D-desosamine biosynthesis
        • M00798 dTDP-L-mycarose biosynthesis
        • M00799 dTDP-L-oleandrose biosynthesis
        • M00800 dTDP-L-megosamine biosynthesis
        • M00801 dTDP-L-olivose biosynthesis
        • M00802 dTDP-D-forosamine biosynthesis
        • M00803 dTDP-D-angolosamine biosynthesis
    • Biosynthesis of other secondary metabolites
      • Biosynthesis of phytochemical compounds
        • M00039 Monolignol biosynthesis
        • M00137 Flavanone biosynthesis
        • M00940 Flavanone biosynthesis
        • M00138 Flavonoid biosynthesis
        • M00941 Isoflavone biosynthesis
        • M00942 Pterocarpan biosynthesis
        • M00966 Equol biosynthesis
        • M00967 Flavone degradation
        • M00962 Psilocybin biosynthesis
        • M00963 Chanoclavine aldehyde biosynthesis
        • M00964 Fumigaclavine biosynthesis
        • M00981 Geissoschizine biosynthesis
        • M00979 Ajmaline biosynthesis
        • M00980 Strychnine biosynthesis
        • M00965 Vinblastine biosynthesis
        • M00943 Reticuline biosynthesis
        • M00944 Morphine biosynthesis
        • M00945 Sanguinarine biosynthesis
        • M00946 Noscapine biosynthesis
        • M00961 Betacyanin biosynthesis
        • M00370 Glucosinolate biosynthesis
        • M00900 Crocin biosynthesis
        • M00971 QS-7 biosynthesis
        • M00894 Cannabidiol biosynthesis
        • M00953 Mugineic acid biosynthesis
        • M00952 Benzoxazinoid biosynthesis
        • M00902 Podophyllotoxin biosynthesis
      • Biosynthesis of beta-lactams
        • M00672 Penicillin biosynthesis
        • M00673 Cephamycin C biosynthesis
        • M00675 Carbapenem-3-carboxylate biosynthesis
        • M00736 Nocardicin A biosynthesis
        • M00674 Clavaminate biosynthesis
      • Biosynthesis of other antibiotics
        • M00877 Kanosamine biosynthesis
        • M00889 Puromycin biosynthesis
        • M00815 Validamycin A biosynthesis
        • M00904 Dapdiamides biosynthesis
        • M00787 Bacilysin biosynthesis
        • M00785 Cycloserine biosynthesis
        • M00848 Aurachin biosynthesis
        • M00788 Terpentecin biosynthesis
        • M00819 Pentalenolactone biosynthesis
        • M00903 Fosfomycin biosynthesis
        • M00890 Roseoflavin biosynthesis
        • M00951 Cremeomycin biosynthesis
        • M00969 Fumagillin biosynthesis
      • Biosynthesis of other fungal compounds
        • M00661 Paspaline biosynthesis
        • M00786 Fumitremorgin alkaloid biosynthesis
        • M00937 Aflatoxin biosynthesis
        • M00893 Lovastatin biosynthesis
        • M00891 Ditryptophenaline biosynthesis
        • M00901 Fumiquinazoline biosynthesis
      • Biosynthesis of other bacterial compounds
        • M00814 Acarbose biosynthesis
        • M00789 Rebeccamycin biosynthesis
        • M00790 Pyrrolnitrin biosynthesis
        • M00805 Staurosporine biosynthesis
        • M00808 Violacein biosynthesis
        • M00835 Pyocyanine biosynthesis
        • M00837 Prodigiosin biosynthesis
        • M00838 Undecylprodigiosin biosynthesis
        • M00921 Cyclooctatin biosynthesis
        • M00905 Grixazone biosynthesis
        • M00876 Staphyloferrin A biosynthesis
        • M00875 Staphyloferrin B biosynthesis
        • M00918 Aerobactin biosynthesis
        • M00906 Ethynylserine biosynthesis
    • Xenobiotics biodegradation
      • Aromatics degradation
        • M00538 Toluene degradation
        • M00537 Xylene degradation
        • M00419 Cymene degradation
        • M00547 Benzene/toluene degradation
        • M00548 Benzene degradation
        • M00551 Benzoate degradation
        • M00637 Anthranilate degradation
        • M00568 Catechol ortho-cleavage
        • M00569 Catechol meta-cleavage
        • M00539 Cumate degradation
        • M00543 Biphenyl degradation
        • M00544 Carbazole degradation
        • M00418 Toluene degradation, anaerobic
        • M00541 Benzoyl-CoA degradation
        • M00540 Benzoate degradation
        • M00534 Naphthalene degradation
        • M00638 Salicylate degradation
        • M00624 Terephthalate degradation
        • M00623 Phthalate degradation
        • M00636 Phthalate degradation
        • M00878 Phenylacetate degradation
        • M00545 Trans-cinnamate degradation
        • M00915 Caffeine degradation