# OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition OC.168894 Bacteria.52587 Proteobacteria.329168 Gammaproteobacteria.197674 Pseudomonas.42772 Pseudomonas_putida.9702 ppu.5437 ppu:PP_5673 D-alanine--D-alanine ligase OC.168894 Bacteria.52587 Proteobacteria.329168 Gammaproteobacteria.197674 Pseudomonas.42772 Pseudomonas_putida.9702 ppf.1506 ppf:Pput_1516 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168894 Bacteria.52587 Proteobacteria.329168 Gammaproteobacteria.197674 Pseudomonas.42772 Pseudomonas_putida.9702 ppw.3638 ppw:PputW619_3677 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168894 Bacteria.52587 Proteobacteria.329168 Gammaproteobacteria.197674 Pseudomonas.42772 Pseudomonas_putida.9702 ppi.4464 ppi:YSA_08119 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168895 Bacteria.52346 Actinobacteria.30308 Cutibacterium.2856 Cutibacterium_acnes.2804 - cacn.69 cacn:RN83_00335 hypothetical protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Clavibacter.1862 Clavibacter_michiganensis.2809 - ccap.2758 ccap:AES38_14495 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Clavibacter.1862 Clavibacter_michiganensis.5064 - cmi.2970 cmi:CMM_2970 ddlB; putative D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Clavibacter.1862 - - cms.2837 cms:CMS3106 ddlB; D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Clavibacter.1862 - - cmc.2805 cmc:CMN_02942 ddlB; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Clavibacter.1862 - - cmh.2835 cmh:VO01_15305 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Rhodoluna.287 - - rla.1351 rla:Rhola_00014000 D-alanine-D-alanine ligase-related ATP-grasp enzyme; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Rhodoluna.287 - - rpla.1317 rpla:A4Z71_06900 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Rathayibacter.840 Rathayibacter_toxicus.30 - rtx.167 rtx:TI83_00970 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Rathayibacter.840 Rathayibacter_toxicus.30 - rtc.1028 rtc:APU90_05510 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Rathayibacter.840 - - rtn.2684 rtn:A6122_2922 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Curtobacterium.417 - - cum.2637 cum:NI26_16065 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Curtobacterium.417 - - cub.1595 cub:BJK06_08150 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - mvd.2670 mvd:AWU67_14485 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - frp.841 frp:AX769_04145 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Agromyces.1320 - - agy.3663 agy:ATC03_19615 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Agromyces.1320 - - agm.2753 agm:DCE93_14320 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cryobacterium.2148 - - cart.3739 cart:PA27867_3822 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cryobacterium.2148 - - cry.3419 cry:B7495_17790 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - cphy.3734 cphy:B5808_19000 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Aurantimicrobium.1074 Aurantimicrobium_sp_.363 - aum.27 aum:AURMO_00010 D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Aurantimicrobium.1074 Aurantimicrobium_sp_.363 - auw.1555 auw:AURUGA1_01609 ddlB; D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Aurantimicrobium.1074 - - amin.531 amin:AUMI_113950 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - psai.469 psai:C3B54_11144 D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - malk.244 malk:MalAC0309_0214 ddlB; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - myl.2877 myl:C3E77_15090 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - salc.2571 salc:C2138_13505 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - hum.514 hum:DVJ78_02560 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - bcv.4121 bcv:Bcav_4215 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - jde.2454 jde:Jden_2550 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - xce.3259 xce:Xcel_3371 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Isoptericola.4534 - - iva.2857 iva:Isova_3013 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cellulosimicrobium.351 - - cet.750 cet:B8281_03890 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cellulosimicrobium.351 - - cceu.1434 cceu:CBR64_07600 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - ske.3650 ske:Sked_37970 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cellulomonas.1403 - - cfi.3721 cfi:Celf_3801 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cellulomonas.1403 - - cga.3111 cga:Celgi_3199 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cellulomonas.1403 - - cez.2551 cez:CBP52_13850 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - ars.900 ars:ADJ73_05275 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pac.2229 pac:PPA2338 D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pak.2328 pak:HMPREF0675_5417 D-ala D-ala ligase N-terminal domain protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pav.2246 pav:TIA2EST22_11575 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pax.2226 pax:TIA2EST36_11435 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - paz.2214 paz:TIA2EST2_11380 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - paw.2326 paw:PAZ_c24400 ddl2; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pcn.2330 pcn:TIB1ST10_11900 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pacc.2313 pacc:PAC1_11940 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pach.2158 pach:PAGK_2246 D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - pacn.2223 pacn:TIA1EST1_11525 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 Cutibacterium_acnes.1850 - cacn.68 cacn:RN83_00330 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Cutibacterium.902 - - pra.2065 pra:PALO_10595 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - ppc.2832 ppc:HMPREF9154_3181 D-ala D-ala ligase N-terminal-like domain protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Acidipropionibacterium.1630 Acidipropionibacterium_acidipropionici.2834 - pbo.3284 pbo:PACID_34210 D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Acidipropionibacterium.1630 Acidipropionibacterium_acidipropionici.2834 - aaci.988 aaci:ASQ49_05145 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Acidipropionibacterium.1630 - - acij.3026 acij:JS278_03140 ddl_2; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - mph.5160 mph:MLP_53380 ddl2; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Tessaracoccus.1219 - - tfl.2505 tfl:RPIT_13550 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Tessaracoccus.1219 - - tfa.1421 tfa:BW733_07830 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Tessaracoccus.1219 - - tes.2601 tes:BW730_14490 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Tessaracoccus.1219 - - tez.1534 tez:BKM78_08075 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Nocardioides.4554 - - nca.4544 nca:Noca_4691 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Nocardioides.5919 - - ndk.2439 ndk:I601_2503 ddlB; D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - kfl.6728 kfl:Kfla_7073 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - mgg.3020 mgg:MPLG2_3124 ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - tfu.1624 tfu:Tfu_1640 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Nocardiopsis.2482 - - nda.2211 nda:Ndas_2236 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Nocardiopsis.2482 - - nal.4424 nal:B005_4589 D-ala D-ala ligase family protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Nocardiopsis.2482 - - ngv.2707 ngv:CDO52_14590 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - tcu.4695 tcu:Tcur_4976 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - sro.8636 sro:Sros_9380 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - noa.8595 noa:BKM31_46060 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Frankia.38 Frankia_sp_.6364 - fre.6136 fre:Franean1_6711 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Frankia.38 Frankia_sp_.10056 - fri.4437 fri:FraEuI1c_4689 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Frankia.38 - - fal.2971 fal:FRAAL3074 ddlA; D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - ace.2124 ace:Acel_2153 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - nml.4885 nml:Namu_5406 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - gob.4669 gob:Gobs_5088 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - bsd.4688 bsd:BLASA_5068 ddlB; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - mmar.5271 mmar:MODMU_5589 ddlB; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - sen.6925 sen:SACE_7389 ddlA; D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - svi.3781 svi:Svir_39720 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 Amycolatopsis_sp_.6828 - amyb.6622 amyb:BKN51_33965 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 Amycolatopsis_sp_.15318 - amyc.7465 amyc:CU254_39235 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 Amycolatopsis_mediterranei.8939 - amd.9195 amd:AMED_9358 ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 Amycolatopsis_mediterranei.8939 - amn.9533 amn:RAM_47985 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 Amycolatopsis_mediterranei.8939 - amm.9189 amm:AMES_9219 ddlA; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 Amycolatopsis_mediterranei.8939 - amz.9191 amz:B737_9221 ddlA; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 - - aoi.8066 aoi:AORI_8112 ddl; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 - - aja.8232 aja:AJAP_42275 ddl; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 - - amq.6919 amq:AMETH_7066 ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Amycolatopsis.9959 - - aab.5821 aab:A4R43_30465 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Pseudonocardia.5676 Pseudonocardia_sp_.897 - psea.2592 psea:WY02_16365 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Pseudonocardia.5676 Pseudonocardia_sp_.897 - psee.4416 psee:FRP1_26420 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Pseudonocardia.5676 Pseudonocardia_sp_.897 - pseh.4156 pseh:XF36_25435 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Pseudonocardia.5676 Pseudonocardia_sp_.897 - pseq.1045 pseq:AD006_05600 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Pseudonocardia.5676 Pseudonocardia_sp_.897 - phh.2064 phh:AFB00_11220 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Pseudonocardia.5676 - - pdx.6226 pdx:Psed_6683 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Pseudonocardia.5676 - - pecq.2453 pecq:AD017_13420 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinosynnema.5451 - - ami.6882 ami:Amir_7091 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinosynnema.5451 - - apre.6654 apre:CNX65_35040 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - sesp.8251 sesp:BN6_85380 ddl5; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - kal.8352 kal:KALB_8833 hypothetical protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - kphy.9868 kphy:AOZ06_52895 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - led.2839 led:BBK82_14560 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoalloteichus.4158 Actinoalloteichus_sp_.5264 - acti.6052 acti:UA75_30810 ATP-grasp enzyme, D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoalloteichus.4158 Actinoalloteichus_sp_.5264 - acad.5936 acad:UA74_30275 ATP-grasp enzyme, D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoalloteichus.4158 Actinoalloteichus_sp_.5264 - acta.2135 acta:C1701_11000 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoalloteichus.4158 - - ahm.5266 ahm:TL08_27110 ATP-grasp enzyme, D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoalloteichus.4158 - - ahg.5488 ahg:AHOG_27965 ddlB; D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - all.5593 all:CRK60702 - OC.168896 Bacteria.52349 Actinobacteria.30303 - - - pmad.6131 pmad:BAY61_31675 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Salinispora.2946 - - stp.4469 stp:Strop_4584 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Salinispora.2946 - - saq.4745 saq:Sare_5102 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Micromonospora.2421 Micromonospora_sp_.3266 - mil.6107 mil:ML5_6251 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Micromonospora.2421 Micromonospora_sp_.3266 - micb.6208 micb:MicB006_6302 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Micromonospora.2421 - - mau.6169 mau:Micau_6289 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - vma.921 vma:VAB18032_04420 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoplanes.6017 Actinoplanes_sp_.7860 - ase.8067 ase:ACPL_8376 ddlA; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoplanes.6017 Actinoplanes_sp_.7860 - acts.8229 acts:ACWT_8243 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoplanes.6017 - - ams.7794 ams:AMIS_81160 putative D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoplanes.6017 - - afs.8424 afs:AFR_42955 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinoplanes.12888 Actinoplanes_sp_.15572 - actn.8126 actn:L083_8202 ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Plantactinospora.2473 - - plk.5120 plk:CIK06_28935 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Plantactinospora.2473 - - plab.3383 plab:C6361_17695 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Plantactinospora.2473 - - plat.5752 plat:C6W10_30075 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - cai.8462 cai:Caci_9048 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - sna.5886 sna:Snas_6426 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Trueperella.403 - - tpy.1399 tpy:CQ11_07550 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Trueperella.403 - - tpyo.26 tpyo:X956_00120 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinotignum.287 - - asg.1039 asg:FB03_06555 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinotignum.287 - - actt.1964 actt:DDD63_11870 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.2667 Actinomyces_sp_.442 - acq.2302 acq:AM609_14255 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.2667 Actinomyces_sp_.442 - acto.1705 acto:C3V41_09335 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.2667 Actinomyces_sp_.4630 - actc.2312 actc:CHIBA101_2414 D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.2667 - - aos.953 aos:AXE84_05060 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.2667 - - ard.839 ard:AXF14_04750 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.2667 - - actp.1874 actp:B6G06_09945 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.2667 - - ane.1017 ane:AN27039_1015 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.3192 Actinomyces_sp_.7586 - avu.1621 avu:BK816_08960 hypothetical protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Actinomyces.3192 - - amy.1441 amy:ADJ76_07750 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Bifidobacterium.5982 - - bast.1603 bast:BAST_1684 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Bifidobacterium.5982 - - bcor.28 bcor:BCOR_0027 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Bifidobacterium.5982 - - bii.1322 bii:BINDI_1356 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Bifidobacterium.5982 - - bact.978 bact:AB656_05715 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - tbi.3491 tbi:Tbis_3582 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - aey.4231 aey:CDG81_23095 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Eggerthella.1057 - - ele.2828 ele:Elen_2988 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 Eggerthella.1057 - - eyy.2422 eyy:EGYY_28170 DdlA; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - gpa.667 gpa:GPA_11840 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - aeq.1949 aeq:AEQU_1987 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30303 - - - cbac.164 cbac:JI75_01055 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168896 Bacteria.52349 Actinobacteria.30309 - - - cwo.4517 cwo:Cwoe_4917 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vch.2989 vch:VCA0572 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcf.433 vcf:IR04_02420 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcs.3141 vcs:MS6_A0622 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vce.3026 vce:Vch1786_II0260 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcq.232 vcq:EN18_01280 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcj.773 vcj:VCD_000746 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vci.3123 vci:O3Y_16223 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vco.588 vco:VC0395_0515 ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcr.3453 vcr:VC395_A0743 ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcm.3112 vcm:VCM66_A0531 ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcl.2673 vcl:VCLMA_B0369 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcx.1463 vcx:VAA049_2363 D-alanine--D-alanine ligase family protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_cholerae.2275 vcz.3125 vcz:VAB027_590 D-alanine--D-alanine ligase family protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_vulnificus.2694 vvu.3126 vvu:VV2_0280 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_vulnificus.2694 vvy.3985 vvy:VVA0785 D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_vulnificus.2694 vvm.1650 vvm:VVM_01614 - OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_vulnificus.2694 vvl.3610 vvl:VV93_v1c37750 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_parahaemolyticus.2951 vpa.3960 vpa:VPA0886 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_parahaemolyticus.2951 vpb.3670 vpb:VPBB_A0831 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_parahaemolyticus.2951 vpk.766 vpk:M636_03885 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_parahaemolyticus.2951 vpf.4230 vpf:M634_22405 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_parahaemolyticus.2951 vph.2864 vph:VPUCM_20791 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_campbellii.3229 vha.4246 vha:VIBHAR_05785 hypothetical protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_campbellii.3229 vca.4025 vca:M892_22760 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vag.4220 vag:N646_4283 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vex.163 vex:VEA_000154 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vdb.1362 vdb:AL552_07145 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vhr.4631 vhr:AL538_24275 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vna.3922 vna:PN96_20595 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vow.3962 vow:A9237_21000 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vro.1649 vro:BSZ04_08410 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vsp.3649 vsp:VS_II0746 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vej.3878 vej:VEJY3_19846 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vfu.3211 vfu:vfu_B00227 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vni.4570 vni:VIBNI_B1133 putative D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_anguillarum.1848 van.276 van:VAA_00329 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_anguillarum.1848 lag.2716 lag:N175_14720 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_anguillarum.1848 vau.3081 vau:VANGNB10_cII0448c ddl; D-alanine-D-alanine ligase-like protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_coralliilyticus.11 vcy.3886 vcy:IX92_20410 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 Vibrio_coralliilyticus.11 vct.1008 vct:JV59_19105 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vtu.3686 vtu:IX91_19605 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vfl.753 vfl:AL536_03680 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vmi.847 vmi:AL543_04265 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vbr.3021 vbr:A6E01_16205 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vsc.3710 vsc:VSVS12_03905 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vga.3237 vga:BSQ33_17420 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vsh.4280 vsh:BSZ05_22500 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vqi.2932 vqi:CCZ37_15640 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Vibrio.1798 - vta.5078 vta:B1685 ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aliivibrio.1097 Aliivibrio_fischeri.2117 vfi.3146 vfi:VF_A0570 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aliivibrio.1097 Aliivibrio_fischeri.2117 vfm.3178 vfm:VFMJ11_A0584 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aliivibrio.1097 - vsa.3018 vsa:VSAL_II0639 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aliivibrio.4865 - awd.589 awd:AWOD_II_0591 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Photobacterium.1403 - ppr.4118 ppr:PBPRB0927 putative D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Photobacterium.1403 - pgb.825 pgb:H744_1c0801 D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Photobacterium.1403 - pds.2807 pds:CAY62_16060 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 - - gho.405 gho:AL542_01975 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 - - pmai.1820 pmai:CF386_10330 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_sp_.1190 she.2115 she:Shewmr4_2129 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_sp_.1190 shm.2176 shm:Shewmr7_2205 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_sp_.1190 shn.2282 shn:Shewana3_2307 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_sp_.8184 shew.3580 shew:CKQ84_19305 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_sp_.9491 shf.1076 shf:CEQ32_06110 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_sp_.14714 shw.2172 shw:Sputw3181_2224 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - son.1833 son:SO_2217 ddlA; D-alanine--D-alanine ligase DdlA; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - sdn.2309 sdn:Sden_2354 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - sfr.2513 sfr:Sfri_2550 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - saz.1890 saz:Sama_1903 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbl.114 sbl:Sbal_2283 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbl.114 sbl:Sbal_4569 hypothetical protein; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbm.2007 sbm:Shew185_2043 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbn.2091 sbn:Sbal195_2090 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbp.2252 sbp:Sbal223_2294 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbt.2045 sbt:Sbal678_2092 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbs.2260 sbs:Sbal117_2407 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_baltica.1346 sbb.2275 sbb:Sbal175_2333 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - slo.2124 slo:Shew_2133 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_putrefaciens.1092 spc.1779 spc:Sputcn32_1801 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 Shewanella_putrefaciens.1092 shp.2190 shp:Sput200_2193 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - sse.1922 sse:Ssed_1920 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - spl.2388 spl:Spea_2422 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - shl.1838 shl:Shal_1854 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - swd.2646 swd:Swoo_2674 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - swp.2606 swp:swp_2771 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - svo.2419 svo:SVI_2416 ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - sja.1586 sja:SJ2017_1623 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - spsw.1231 spsw:Sps_01253 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - sbj.1786 sbj:CF168_09285 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - smav.1653 smav:CFF01_08590 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Shewanella.477 - salg.2965 salg:BS332_17285 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Microbulbifer.2305 - mthd.2361 mthd:A3224_12505 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Microbulbifer.2305 - micc.315 micc:AUP74_00294 ddlA; D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Microbulbifer.2305 - maga.645 maga:Mag101_03195 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Microbulbifer.2305 - mii.3508 mii:BTJ40_18965 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_sp_.2250 aea.2213 aea:C2U39_11845 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_sp_.5902 aem.1523 aem:CK911_08230 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.1603 aha.2335 aha:AHA_2404 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.1603 ahy.2183 ahy:AHML_10945 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.1603 ahr.2117 ahr:V428_11260 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.1603 ahp.2118 ahp:V429_11275 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.1603 ahj.2206 ahj:V469_12130 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.1603 ahh.2077 ahh:RY45_10860 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.1604 ahi.2242 ahi:VU14_12065 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_hydrophila.8050 ahd.1647 ahd:AI20_09010 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_salmonicida.598 asa.2052 asa:ASA_2261 ddlA; D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_salmonicida.598 aeo.1706 aeo:O23A_p1545 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_veronii.989 avr.2212 avr:B565_2245 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 Aeromonas_veronii.989 avo.2072 avo:AMS64_10985 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 - amed.1652 amed:B224_2456 D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 - asr.1926 asr:WL1483_2881 ddl; D-alanyl-alanine synthetase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 - aaj.1978 aaj:BOQ57_10250 D-alanine--D-alanine ligase A; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 - adh.3017 adh:CK627_15890 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 - acav.1839 acav:VI35_11445 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 Aeromonas.1405 - arv.2488 arv:C7N77_13540 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Gammaproteobacteria.53923 - - tau.295 tau:Tola_0232 D-alanine/D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Deltaproteobacteria.96139 - - bmx.1724 bmx:BMS_1867 ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168897 Bacteria.52703 Proteobacteria.289253 Deltaproteobacteria.99552 - - bsto.2034 bsto:C0V70_10490 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168898 Bacteria.52665 Actinobacteria.148727 Streptomyces.46771 Streptomyces_hygroscopicus.5376 - shy.6086 shy:SHJG_6157 D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168898 Bacteria.52665 Actinobacteria.148727 Streptomyces.46771 Streptomyces_hygroscopicus.5376 - sho.5897 sho:SHJGH_5919 D-alanine--D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168898 Bacteria.52665 Actinobacteria.148727 Streptomyces.46771 - - slv.3157 slv:SLIV_16055 D-alanine-D-alanine ligase B; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] OC.168898 Bacteria.52665 Actinobacteria.148727 Streptomyces.46771 - - spun.4129 spun:BFF78_22095 D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]