# OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Ralstonia.13229 Ralstonia_pickettii.11746 rpj.5784 rpj:N234_29895 3-hydroxybutyryl-CoA dehydrogenase OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6232 - reu.3944 reu:Reut_B3955 regulatory protein, LysR:LysR, substrate-binding protein OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6231 Cupriavidus_necator.3825 reh.5262 reh:H16_B1653 h16_B1653; transcriptional regulator, LysR-family OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6231 Cupriavidus_necator.3825 cnc.5271 cnc:CNE_2c16460 transcriptional regulator LysR family OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6231 Cupriavidus_necator.3825 cuh.5675 cuh:BJN34_29935 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6231 - cti.4572 cti:RALTA_B1464 putative transcriptional regulator, LysR family OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6232 - cbw.6228 cbw:RR42_s2142 putative LysR-family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6232 Cupriavidus_sp_.5290 ccup.5963 ccup:BKK81_31060 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6232 Cupriavidus_sp_.5290 cup.4885 cup:BKK80_25290 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Cupriavidus.6232 Cupriavidus_sp_.5290 cuu.6000 cuu:BKK79_31000 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.1333 Bordetella_parapertussis.3036 bpa.1303 bpa:BPP1373 probable LysR-family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.1333 Bordetella_bronchiseptica.1882 bbr.2421 bbr:BB2439 probable LysR-family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.1333 Bordetella_bronchiseptica.1882 bbm.2637 bbm:BN115_2675 probable LysR-family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.1333 Bordetella_bronchiseptica.1882 bbh.272 bbh:BN112_0264 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.1333 Bordetella_bronchiseptica.1882 bbx.2273 bbx:BBS798_2278 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.1333 - bpt.2851 bpt:Bpet2911 transcriptional regulator, LysR-family OC.283327 Bacteria.77811 Proteobacteria.116229 Betaproteobacteria.10794 Bordetella.14442 - bpt.4062 bpt:Bpet4153 transcriptional regulator, LysR-family OC.283327 Bacteria.77811 Proteobacteria.116229 Betaproteobacteria.10794 Bordetella.14442 - bhz.1160 bhz:ACR54_01181 gltC_5; HTH-type transcriptional regulator GltC OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.14654 - bhz.2716 bhz:ACR54_02765 gltC_11; HTH-type transcriptional regulator GltC OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.14654 - bpdz.1618 bpdz:BBN53_08215 3-hydroxybutyryl-CoA dehydrogenase OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Bordetella.1334 - bgm.1670 bgm:CAL15_08470 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 Achromobacter_xylosoxidans.9748 axy.2434 axy:AXYL_02460 bacterial regulatory helix-turn-helix protein, LysR family protein 66 OC.283327 Bacteria.77811 Proteobacteria.116229 Betaproteobacteria.10794 Achromobacter.1811 Achromobacter_xylosoxidans.11849 axy.4655 axy:AXYL_04715 bacterial regulatory helix-turn-helix protein, LysR family protein 154 OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 Achromobacter_xylosoxidans.1396 axo.4022 axo:NH44784_040781 probable LysR-family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 Achromobacter_xylosoxidans.1396 axn.2262 axn:AX27061_2265 putative LysR-family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 Achromobacter_xylosoxidans.1396 axs.1993 axs:LH59_10555 - OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 Achromobacter_xylosoxidans.1396 axx.2224 axx:ERS451415_02262 gltC_7; HTH-type transcriptional regulator gltC OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 - adt.2161 adt:APT56_11090 3-hydroxybutyryl-CoA dehydrogenase OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 - ais.490 ais:BUW96_02580 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116229 Betaproteobacteria.10794 Achromobacter.1811 - ais.3065 ais:BUW96_16170 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 - asw.3036 asw:CVS48_15785 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Achromobacter.3443 - achr.4532 achr:C2U31_23400 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Acidovorax.3750 Acidovorax_sp_.1557 ack.3991 ack:C380_20500 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Acidovorax.3750 Acidovorax_sp_.1557 acra.3811 acra:BSY15_858 bacterial regulatory helix-turn-helix, lysR family protein OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Acidovorax.3750 Acidovorax_carolinensis.4691 acip.3083 acip:CBP36_16200 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Delftia.3032 - dac.5839 dac:Daci_5965 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Delftia.3032 Delftia_sp_.3855 del.632 del:DelCs14_0627 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Delftia.3032 - dts.4747 dts:BI380_25110 3-hydroxybutyryl-CoA dehydrogenase OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Delftia.3032 Delftia_sp_.3855 dhk.5418 dhk:BO996_28005 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116229 Betaproteobacteria.10794 Variovorax.12490 - vbo.2736 vbo:CKY39_14400 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Comamonas.2979 Comamonas_testosteroni.2543 ctt.3851 ctt:CtCNB1_3921 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Proteobacteria.36660 Betaproteobacteria.18951 Comamonas.2979 Comamonas_testosteroni.2543 ctes.4521 ctes:O987_23585 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116229 Betaproteobacteria.10794 Ottowia.2709 - otk.2565 otk:C6570_13555 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116228 Alphaproteobacteria.148619 - - brn.3909 brn:D1F64_22240 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116228 Alphaproteobacteria.148619 Yangia.2205 - yan.3507 yan:AYJ57_17935 hypothetical protein OC.283327 Bacteria.77811 Proteobacteria.116228 Alphaproteobacteria.148619 Yangia.2205 - ypac.4405 ypac:CEW88_22930 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116228 Alphaproteobacteria.148619 - - thw.3668 thw:BMG03_19120 hypothetical protein OC.283327 Bacteria.77811 Proteobacteria.116229 Alphaproteobacteria.148621 Novosphingobium.8269 Novosphingobium_sp_.4366 not.3783 not:C7W88_22060 hypothetical protein; K17737 LysR family transcriptional regulator, carnitine catabolism transcriptional activator OC.283327 Bacteria.77811 Proteobacteria.116229 Alphaproteobacteria.293461 Sphingopyxis.14649 - sphk.3085 sphk:SKP52_15860 Putative HTH-type transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116229 Alphaproteobacteria.148620 Roseomonas.2864 - rgi.3976 rgi:RGI145_20415 hypothetical protein OC.283327 Bacteria.77811 Proteobacteria.116229 Alphaproteobacteria.148620 Roseomonas.2864 - ros.354 ros:CTJ15_01460 LysR family transcriptional regulator OC.283327 Bacteria.77811 Proteobacteria.116228 Alphaproteobacteria.148619 Thalassospira.5023 - thac.4469 thac:CSC3H3_23255 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Corynebacterium.14551 - - cgy.1493 cgy:CGLY_07545 Transcriptional regulator, LysR-family OC.283327 Bacteria.77811 Actinobacteria.53444 Corynebacterium.14551 - - cdx.1982 cdx:CDES_10540 transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Corynebacterium.14551 - - ccjz.1963 ccjz:ccrud_10295 hypothetical protein OC.283327 Bacteria.77811 Actinobacteria.53444 Rhodococcus.10139 - - rha.5276 rha:RHA1_ro05264 probable transcriptional regulator, LysR family protein OC.283327 Bacteria.77811 Actinobacteria.53444 Rhodococcus.10139 Rhodococcus_opacus.11488 - rop.5303 rop:ROP_53090 putative LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Rhodococcus.10139 Rhodococcus_opacus.4648 - roa.1879 roa:Pd630_LPD01784 putative HTH-type transcriptional regulator ybhD OC.283327 Bacteria.77811 Actinobacteria.53444 Rhodococcus.10139 Rhodococcus_sp_.2289 - rhb.4621 rhb:NY08_5213 Chromosome initiation inhibitor OC.283327 Bacteria.77811 Actinobacteria.53444 Rhodococcus.10139 - - rfa.3319 rfa:A3L23_03352 gltC_5; HTH-type transcriptional regulator GltC OC.283327 Bacteria.77811 Actinobacteria.53444 Rhodococcus.10139 Rhodococcus_sp_.2289 - rhu.677 rhu:A3Q40_00673 gltC_1; HTH-type transcriptional regulator GltC OC.283327 Bacteria.77811 Actinobacteria.53444 Dietzia.4221 Dietzia_sp_.5583 - diz.2514 diz:CT688_13380 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Streptomyces.64220 - - scb.5141 scb:SCAB_5881 probable LysR-family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Streptomyces.64219 - - svl.3621 svl:Strvi_3726 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Actinobacteria.53444 Streptomyces.64219 - - sbh.2175 sbh:SBI_02110 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Streptomyces.64219 - - src.1408 src:M271_06840 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Streptomyces.64219 - - sls.1145 sls:SLINC_1127 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Streptomyces.64219 - - sauo.7237 sauo:BV401_38895 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Streptomyces.64219 - - smal.7011 smal:SMALA_7053 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Nocardiopsis.6891 - - nda.3544 nda:Ndas_3664 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Actinobacteria.53444 - - - noa.4067 noa:BKM31_21235 LysR family transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53445 Frankia.9579 Frankia_sp_.9746 - fri.4035 fri:FraEuI1c_4219 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Actinobacteria.53444 - - - sen.4201 sen:SACE_4400 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Actinobacteria.53444 - - - svi.1782 svi:Svir_18480 transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Amycolatopsis.13263 - - amq.2815 amq:AMETH_2731 transcriptional regulator, LysR family OC.283327 Bacteria.77811 Actinobacteria.53444 Amycolatopsis.13263 - - aab.2381 aab:A4R43_12045 transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 Pseudonocardia.5152 Pseudonocardia_sp_.6197 - pseh.1754 pseh:XF36_10355 hypothetical protein OC.283327 Bacteria.77811 Actinobacteria.53444 Pseudonocardia.5152 Pseudonocardia_sp_.6197 - pseq.3422 pseq:AD006_18740 hypothetical protein OC.283327 Bacteria.77811 Actinobacteria.53444 Pseudonocardia.5152 - - pecq.4833 pecq:AD017_26580 hypothetical protein OC.283327 Bacteria.77811 Actinobacteria.53444 Actinoalloteichus.10685 - - ahm.3742 ahm:TL08_19165 transcriptional regulator OC.283327 Bacteria.77811 Actinobacteria.53444 - - - pmad.2709 pmad:BAY61_13815 transcriptional regulator