# OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition OC.311770 Bacteria.356616 Proteobacteria.81727 Gammaproteobacteria.406672 - - dko.1622 dko:I596_2491 Ribulose bisphosphate carboxylase large chain CbbL; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Gammaproteobacteria.182625 Nitrosococcus.1366 - noc.324 noc:Noc_0333 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Gammaproteobacteria.182625 Nitrosococcus.1366 - nhl.3106 nhl:Nhal_3442 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Gammaproteobacteria.182625 Nitrosococcus.1366 - nwa.2504 nwa:Nwat_2772 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Gammaproteobacteria.182625 - - ntt.1247 ntt:TAO_1268 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Gammaproteobacteria.182625 - - slim.2344 slim:SCL_2417 ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Gammaproteobacteria.182625 - - sva.3322 sva:SVA_3460 ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Betaproteobacteria.182757 Hydrogenophaga.9192 - hyr.4042 hyr:BSY239_776 hypothetical protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Betaproteobacteria.117874 Nitrosomonas.2597 Nitrosomonas_sp_.657 nit.2558 nit:NAL212_2942 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Betaproteobacteria.117874 Nitrosomonas.2597 Nitrosomonas_sp_.657 nii.2838 nii:Nit79A3_3235 Ribulose bisphosphate carboxylase large chain; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Betaproteobacteria.117874 Nitrosomonas.2597 - nco.1078 nco:AAW31_06725 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Betaproteobacteria.117874 Nitrosomonas.2597 - nur.1123 nur:ATY38_05760 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Betaproteobacteria.199709 Nitrosospira.3007 - nmu.728 nmu:Nmul_A0686 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Betaproteobacteria.117874 Nitrosospira.1972 - nlc.432 nlc:EBAPG3_001975 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.225010 Mesorhizobium.6079 - mci.4222 mci:Mesci_4283 ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.225010 Mesorhizobium.6079 Mesorhizobium_sp_.9425 mesw.4588 mesw:A9K65_023735 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 - - pht.4520 pht:BLM14_23975 ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhizobium.32248 - rga.6169 rga:RGR602_PC01554 cbbL; ribulose-bisophosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.6471 - bja.5037 bja:blr2585 rbcL; ribulose bisophosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.6471 Bradyrhizobium_japonicum.6117 bju.7147 bju:BJ6T_72230 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.6471 Bradyrhizobium_japonicum.6117 bjp.6706 bjp:RN69_35020 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.11694 Bradyrhizobium_sp_.3574 bra.1561 bra:BRADO1659 cbbL; Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.13097 Bradyrhizobium_sp_.9104 bbt.499 bbt:BBta_0451 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.11694 Bradyrhizobium_sp_.3574 bbt.5954 bbt:BBta_6397 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.6471 Bradyrhizobium_sp_.34837 brs.5342 brs:S23_53970 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.11694 - aol.5814 aol:S58_58790 ribulose bisphosphate carboxylase large chain, RuBisCO large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.6471 Bradyrhizobium_sp_.19742 brc.2198 brc:BCCGELA001_11200 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.6471 Bradyrhizobium_sp_.14738 brad.2322 brad:BF49_2160 Ribulose bisphosphate carboxylase large chain EC 41139; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.13097 - bic.1338 bic:LMTR13_06345 ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.11694 Bradyrhizobium_sp_.30700 bro.5010 bro:BRAD285_5742 cbbL; Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.11694 Bradyrhizobium_sp_.3574 brk.3728 brk:CWS35_19475 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Bradyrhizobium.6471 - bot.7476 bot:CIT37_40735 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhodopseudomonas.679 - rpa.1555 rpa:RPA1559 cbbL; ribulose-bisphosphate carboxylase large chain; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhodopseudomonas.679 - rpb.3944 rpb:RPB_3964 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhodopseudomonas.679 - rpc.1328 rpc:RPC_1327 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhodopseudomonas.679 - rpd.3685 rpd:RPD_3722 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhodopseudomonas.679 - rpe.1365 rpe:RPE_1361 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhodopseudomonas.679 - rpt.1724 rpt:Rpal_1747 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Rhodopseudomonas.679 - rpx.3858 rpx:Rpdx1_3960 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Nitrobacter.321 - nwi.2726 nwi:Nwi_2929 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Nitrobacter.321 - nha.147 nha:Nham_3751 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Nitrobacter.321 - nha.147 nha:Nham_4049 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Oligotropha.3471 - ocg.3389 ocg:OCA5_pHCG300470 cbbL; ribulose bisphosphate carboxylase large chain CbbL; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Oligotropha.3471 - oco.3329 oco:OCA4_pHCG3B00470 cbbL; ribulose bisphosphate carboxylase large chain CbbL; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 - - sno.477 sno:Snov_0428 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 - - msl.1211 msl:Msil_1195 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 - - rva.110 rva:Rvan_0010 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Devosia.4109 - deq.651 deq:XM25_03245 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Yangia.4094 - yan.3563 yan:AYJ57_18275 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 - - tpro.2225 tpro:Ga0080559_TMP3009 ribulose 1,5-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 - - paby.2743 paby:Ga0080574_TMP3477 ribulose 1,5-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Acidiphilium.2834 - acr.869 acr:Acry_0824 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 Acidiphilium.2834 - amv.1162 amv:ACMV_10890 cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Proteobacteria.81727 Alphaproteobacteria.35011 - - nao.2753 nao:Y958_13945 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Firmicutes.48611 Firmicutes___Bacilli.144018 Kyrpidia.1443 - bts.2646 bts:Btus_2871 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Firmicutes.48611 Firmicutes___Bacilli.144018 Kyrpidia.1443 - kyr.2628 kyr:CVV65_14355 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Firmicutes.48611 Firmicutes___Clostridia.140922 Sulfobacillus.1837 - say.766 say:TPY_0782 rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Firmicutes.48611 Firmicutes___Clostridia.140922 Sulfobacillus.1837 - sap.2720 sap:Sulac_2858 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.137180 Mycobacterium.43835 - - mchi.5217 mchi:AN480_28575 ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.137180 Mycolicibacterium.27722 - - mll.3397 mll:B1R94_18940 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.141267 Nocardia.7523 - - ncy.3144 ncy:NOCYR_3243 cbbL; Ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.141267 Nocardia.7523 - - nno.3910 nno:NONO_c39830 rbcL; ribulose bisphosphate carboxylase large chain; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.141267 Nocardia.7523 - - nsl.2376 nsl:BOX37_12195 ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.141267 Nocardia.7523 - - nsr.4215 nsr:NS506_04565 rbcL; Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.141267 Nocardia.7523 - - ntp.3458 ntp:CRH09_17990 rbcL; ribulose-bisphosphate carboxylase large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.137180 - - - tcu.1629 tcu:Tcur_1655 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.137180 Pseudonocardia.13178 - - pdx.5828 pdx:Psed_6249 Ribulose bisphosphate carboxylase large chain; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.137180 Pseudonocardia.4992 Pseudonocardia_sp_.6039 - psee.599 psee:FRP1_03415 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.137180 Pseudonocardia.4992 Pseudonocardia_sp_.6039 - pseq.2029 pseq:AD006_11025 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Actinobacteria.137180 Pseudonocardia.4992 - - pecq.3439 pecq:AD017_18855 rbcL; ribulose 1,5-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Deinococcus_Thermus.6224 Thermus.3844 - - tos.1656 tos:Theos_1735 ribulose 1,5-bisphosphate carboxylase, large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Deinococcus_Thermus.6224 Meiothermus.4219 - - msv.2968 msv:Mesil_3255 Ribulose-bisphosphate carboxylase; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 Verrucomicrobia.9913 - - - min.1234 min:Minf_1264 rbcL; Ribulose 1,5-bisphosphate carboxylase, large subunit; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] OC.311770 Bacteria.356616 - - - - mox.2021 mox:DAMO_2165 cbbL; Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]