# OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition OC.386599 Eukaryotes.405293 Protists.15516 Alveolates.21127 - - smin.10489 smin:v1.2.020163.t1 symbB.v1.2.020163.t1; - OC.386599 Eukaryotes.405293 Protists.15516 Alveolates.21127 - - smin.10489 smin:v1.2.020164.t1 symbB.v1.2.020164.t1; - OC.386599 Eukaryotes.425196 Protists.59316 Stramenopiles.3140 Diatoms.3665 - fcy.1919 fcy:FRACYDRAFT_274098 FR2; rhodopsin OC.386599 Eukaryotes.425196 Protists.59316 Stramenopiles.3140 Diatoms.3665 - fcy.1919 fcy:FRACYDRAFT_287459 FR1; putative rhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.153766 Vibrio.18623 Vibrio_campbellii.4310 vha.1980 vha:VIBHAR_02160 hypothetical protein OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.153766 Vibrio.18623 Vibrio_campbellii.4310 vca.542 vca:M892_02525 proteorhodopsin light harvesting proton pump OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.219716 - - pmai.1445 pmai:CF386_07895 biphenyl 2,3-dioxygenase OC.386599 Bacteria.332612 Proteobacteria.133968 Gammaproteobacteria.168328 Marinobacter.5591 - mpq.16 mpq:ABA45_08875 xanthorhodopsin OC.386599 Bacteria.332612 Proteobacteria.133968 Gammaproteobacteria.168328 Marinobacter.5591 - mpq.16 mpq:ABA45_13190 xanthorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.153766 Glaciecola.4906 - gni.412 gni:GNIT_0402 bacteriorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.153766 - - gps.1947 gps:C427_1925 bacteriorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.219716 - - hja.320 hja:BST95_01465 biphenyl 2,3-dioxygenase OC.386599 Bacteria.332612 Proteobacteria.133968 Gammaproteobacteria.168328 Legionella.9476 - lha.1062 lha:LHA_1133 Xanthorhodopsin OC.386599 Bacteria.332612 Proteobacteria.133968 Gammaproteobacteria.382578 Thiomicrospira.2227 - tcy.1481 tcy:Thicy_1509 rhodopsin OC.386599 Bacteria.332612 Proteobacteria.133968 Gammaproteobacteria.168328 Spiribacter.34 - ssal.981 ssal:SPISAL_04940 rhodopsin OC.386599 Bacteria.332612 Proteobacteria.133968 Gammaproteobacteria.168328 Spiribacter.34 - spiu.1106 spiu:SPICUR_05670 hypothetical protein OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.442764 - - rfo.402 rfo:REIFOR_00373 proteorhodopsin OC.386599 Bacteria.332612 Proteobacteria.133968 Gammaproteobacteria.445671 - - saln.1290 saln:SALB1_1273 Proteorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Gammaproteobacteria.153767 Thioglobus.2691 - tsn.1570 tsn:W908_08270 proteorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Betaproteobacteria.114412 Variovorax.10709 Variovorax_sp_.3428 vaa.3333 vaa:AX767_17640 biphenyl 2,3-dioxygenase OC.386599 Bacteria.385125 Proteobacteria.101321 Betaproteobacteria.114412 Methylopumilus.62 - mbac.337 mbac:BN1209_0339 Green-light absorbing proteorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Betaproteobacteria.114412 Methylopumilus.62 - mbat.578 mbat:BN1208_0596 Green-light absorbing proteorhodopsin OC.386599 Bacteria.332612 Proteobacteria.133969 Betaproteobacteria.192107 Methylopumilus.2250 - mbat.579 mbat:BN1208_0597 Xanthorhodopsin OC.386599 Bacteria.332612 Proteobacteria.133968 Alphaproteobacteria.246760 Octadecabacter.1996 - oat.3814 oat:OAN307_c45340 xanthorhodopsin-like rhodopsin-precursor OC.386599 Bacteria.332612 Proteobacteria.133968 Alphaproteobacteria.246760 Octadecabacter.1996 - oar.3759 oar:OA238_c48250 xanthorodopsin-like rhodopsin-precursor OC.386599 Bacteria.332612 Proteobacteria.133968 Alphaproteobacteria.164249 Sphingomonas.29936 - ssan.1256 ssan:NX02_06040 xanthorhodopsin OC.386599 Bacteria.332612 Proteobacteria.133968 Alphaproteobacteria.164249 Sphingobium.9223 Sphingobium_sp_.6310 sphr.178 sphr:BSY17_1105 xanthorhodopsin OC.386599 Bacteria.332614 Proteobacteria.194943 Alphaproteobacteria.72979 - - cij.1289 cij:WG74_06800 rhodopsin OC.386599 Bacteria.332614 Proteobacteria.388183 Alphaproteobacteria.211250 Erythrobacter.13905 - egn.155 egn:BMF35_a0149 Proteorhodopsin OC.386599 Bacteria.332614 Proteobacteria.194943 Alphaproteobacteria.72979 Erythrobacter.14873 - egn.2539 egn:BMF35_b0119 Proteorhodopsin OC.386599 Bacteria.332614 Proteobacteria.194943 Alphaproteobacteria.72979 Altererythrobacter.11708 - anh.2407 anh:A6F65_02465 Green-light absorbing proteorhodopsin precursor OC.386599 Bacteria.385125 Proteobacteria.101321 Alphaproteobacteria.152969 Pelagibacter.350 - pub.613 pub:SAR11_0625 bacteriorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Alphaproteobacteria.152969 Pelagibacter.350 - pel.891 pel:SAR11G3_00893 proteorhodopsin OC.386599 Bacteria.385125 Proteobacteria.101321 Alphaproteobacteria.169116 - - apc.426 apc:HIMB59_00004280 Bacteriorhodopsin-like protein OC.386599 Bacteria.385125 Proteobacteria.101321 Alphaproteobacteria.152969 - - apm.219 apm:HIMB5_00002180 Bacteriorhodopsin-like protein OC.386599 Bacteria.385125 Proteobacteria.101321 Alphaproteobacteria.169116 - - apb.2114 apb:SAR116_2126 hypothetical protein OC.386599 Bacteria.385125 Firmicutes.83613 Firmicutes___Bacilli.63192 Bacillus.69171 - bbev.2067 bbev:BBEV_2142 Proteorhodopsin OC.386599 Bacteria.385125 Firmicutes.83613 Firmicutes___Bacilli.63192 Exiguobacterium.56 - esi.1384 esi:Exig_1419 rhodopsin OC.386599 Bacteria.385125 Firmicutes.83613 Firmicutes___Bacilli.63192 Exiguobacterium.56 Exiguobacterium_sp_.3492 eat.743 eat:EAT1b_0735 rhodopsin OC.386599 Bacteria.385125 Firmicutes.83613 Firmicutes___Bacilli.63192 Exiguobacterium.56 - ean.1288 ean:Eab7_1329 Proteorhodopsin OC.386599 Bacteria.385125 Firmicutes.83613 Firmicutes___Bacilli.63192 Exiguobacterium.56 Exiguobacterium_sp_.1076 exm.1562 exm:U719_08240 rhodopsin OC.386599 Bacteria.385125 Firmicutes.83613 Firmicutes___Bacilli.63192 Exiguobacterium.56 Exiguobacterium_sp_.1076 exu.1952 exu:ESP131_10350 rhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Clavibacter.3817 - - cmh.2765 cmh:VO01_14950 xanthorhodopsin OC.386599 Bacteria.332612 Actinobacteria.201370 Microbacterium.10386 - - mcw.142 mcw:A8L33_00600 hypothetical protein OC.386599 Bacteria.332612 Actinobacteria.110221 Rhodoluna.142 - - rla.1167 rla:Rhola_00012080 Bacteriorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Rhodoluna.142 - - rpla.1213 rpla:A4Z71_06355 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Cryobacterium.2044 - - cart.3620 cart:PA27867_3700 Xanthorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Cryobacterium.2044 - - cry.2072 cry:B7495_10700 xanthorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Aurantimicrobium.745 - - amin.1468 amin:AUMI_18970 Putative actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Aurantimicrobium.745 Aurantimicrobium_sp_.1975 - auw.462 auw:AURUGA1_00474 Green-light absorbing proteorhodopsin precursor OC.386599 Bacteria.385125 Actinobacteria.287311 - - - psai.1300 psai:C3B54_11643 bacteriorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Planktophila.532 - - plan.265 plan:A1s21148_01350 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Planktophila.532 - - plak.224 plak:A1s21155_01145 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Planktophila.532 - - plim.142 plim:PHILAsVB114_00755 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Planktophila.532 - - psuf.225 psuf:A1sIA56_01155 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Planktophila.532 - - pvs.214 pvs:A1sIA79_01085 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Planktophila.532 - - pvn.292 pvn:A7sIIA15_01515 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Nanopelagicus.5 - - abam.1001 abam:B1s21122_05175 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Nanopelagicus.5 - - nhi.964 nhi:B1s21160_04980 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.110221 Nanopelagicus.5 - - nab.911 nab:B1sIIB91_04720 actinorhodopsin OC.386599 Bacteria.332612 Actinobacteria.259662 - - - abai.1808 abai:IMCC26256_11597 Bacteriorhodopsin-like protein OC.386599 Bacteria.332612 Cyanobacteria.29128 - - - hao.3035 hao:PCC7418_3250 rhodopsin OC.386599 Bacteria.332612 Cyanobacteria.29128 Gloeobacter.4269 - - gvi.238 gvi:gll0198 bacterioopsin OC.386599 Bacteria.332612 Chloroflexi.14877 Roseiflexus.4681 - - rrs.2805 rrs:RoseRS_2966 rhodopsin OC.386599 Bacteria.332613 Deinococcus_Thermus.13062 Deinococcus.10596 - - dpu.533 dpu:SU48_02770 hypothetical protein OC.386599 Bacteria.332612 Deinococcus_Thermus.13134 Deinococcus.10670 - - dpu.1584 dpu:SU48_08350 xanthorhodopsin OC.386599 Bacteria.332614 Deinococcus_Thermus.18169 - - - tra.2161 tra:Trad_2252 rhodopsin OC.386599 Bacteria.332614 Deinococcus_Thermus.18510 - - - tra.2809 tra:Trad_2944 rhodopsin OC.386599 Bacteria.332612 Deinococcus_Thermus.6838 Thermus.1754 Thermus_thermophilus.2864 - ttl.1299 ttl:TtJL18_1346 bacteriorhodopsin OC.386599 Bacteria.332612 Deinococcus_Thermus.6838 Thermus.1754 - - thc.40 thc:TCCBUS3UF1_10280 Rhodopsin OC.386599 Bacteria.332612 Deinococcus_Thermus.6838 Thermus.1754 - - tos.1387 tos:Theos_1450 bacteriorhodopsin OC.386599 Bacteria.332612 Deinococcus_Thermus.6838 Thermus.1754 - - taq.1569 taq:TO73_1640 proteorhodopsin OC.386599 Bacteria.332612 Planctomycetes.29725 - - - ipa.3415 ipa:Isop_3505 rhodopsin OC.386599 Bacteria.332614 Planctomycetes.15720 - - - phm.48 phm:PSMK_04490 hypothetical membrane protein OC.386599 Bacteria.332614 Planctomycetes.15720 - - - phm.48 phm:PSMK_22280 bacterial rhodopsin family protein OC.386599 Bacteria.332612 Bacteroidetes.124115 Salinibacter.678 - - sru.1451 sru:SRU_1500 xanthorhodopsin OC.386599 Bacteria.332612 Bacteroidetes.124115 Salinibacter.678 - - srm.1686 srm:SRM_01698 Xanthorhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 - - - hhy.1829 hhy:Halhy_1745 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 - - - alm.2537 alm:AO498_12725 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Spirosoma.714 - - sli.1707 sli:Slin_1643 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Spirosoma.714 - - smon.475 smon:AWR27_02250 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Runella.1800 - - rsi.302 rsi:Runsl_0239 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Runella.1800 - - run.4682 run:DR864_24180 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Fibrella.6340 - - fib.2269 fib:A6C57_11675 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Hymenobacter.846 Hymenobacter_sp_.4786 - hye.926 hye:AM218_05115 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61810 Hymenobacter.7131 Hymenobacter_sp_.9027 - hyp.2487 hyp:A0257_12840 hypothetical protein OC.386599 Bacteria.385125 Bacteroidetes.61809 Hymenobacter.846 Hymenobacter_sp_.10909 - hyz.968 hyz:AXW84_04910 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Hymenobacter.846 - - hnv.3793 hnv:DDQ68_20735 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 - - - mtt.2705 mtt:Ftrac_2783 rhodopsin OC.386599 Bacteria.332614 Bacteroidetes.61888 Dokdonia.2779 Dokdonia_sp_.856 - kdi.510 kdi:Krodi_0510 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Dokdonia.2699 Dokdonia_sp_.175 - kdi.2210 kdi:Krodi_2220 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Dokdonia.1991 Dokdonia_sp_.3762 - dok.1361 dok:MED134_07119 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Dokdonia.1991 - - ddo.1765 ddo:I597_1806 Green-light absorbing proteorhodopsin precursor OC.386599 Bacteria.385125 Bacteroidetes.61809 Dokdonia.2699 Dokdonia_sp_.175 - dod.117 dod:DCS32_00595 rhodopsin OC.386599 Bacteria.332614 Bacteroidetes.61888 Dokdonia.2779 Dokdonia_sp_.856 - dod.1846 dod:DCS32_09535 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 - - - ptq.190 ptq:P700755_000151 proteorhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Nonlabens.3651 - - ndo.323 ndo:DDD_0294 proteorhodopsin OC.386599 Bacteria.332614 Bacteroidetes.61888 Nonlabens.1818 - - ndo.1024 ndo:DDD_1028 NQ rhodopsin OC.386599 Bacteria.332614 Bacteroidetes.61888 Nonlabens.1818 Nonlabens_sp_.3680 - nom.1021 nom:AAT17_05410 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Nonlabens.2614 Nonlabens_sp_.4915 - nom.2293 nom:AAT17_12005 rhodopsin OC.386599 Bacteria.332614 Bacteroidetes.61888 Nonlabens.1818 - - nsd.90 nsd:BST91_00470 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Nonlabens.2614 - - nsd.1286 nsd:BST91_06755 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Nonlabens.3028 Nonlabens_sp_.1589 - nob.1544 nob:CW736_07970 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Polaribacter.4808 Polaribacter_sp_.6043 - pom.2473 pom:MED152_12844 proteorhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Winogradskyella.4696 - - win.3357 win:WPG_3399 proteorhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Winogradskyella.2922 - - wij.2851 wij:BWZ20_14695 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 - - - syi.1622 syi:SB49_08605 rhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Formosa.3467 - - for.2396 for:FORMB_24830 proteorhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 Formosa.1808 - - foh.1721 foh:FORMA_17850 proteorhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 - - - spon.771 spon:HME9304_00764 Blue-light absorbing proteorhodopsin OC.386599 Bacteria.385125 Bacteroidetes.61809 - - - kos.3962 kos:KORDIASMS9_04159 green-light absorbing proteorhodopsin