ID or terms query

OC.12884 (67 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.12884 Bacteria.405163 Proteobacteria.111167 Deltaproteobacteria.14614 Bdellovibrio.985 Bdellovibrio_bacteriovorus.1952 bba.288 bba:Bd0316 rhlE; ATP-dependent RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Deltaproteobacteria.14614 Bdellovibrio.985 Bdellovibrio_bacteriovorus.1952 bbat.321 bbat:Bdt_0312 rhlE; ATP-dependent RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Deltaproteobacteria.14614 Bdellovibrio.985 Bdellovibrio_bacteriovorus.1952 bbac.2609 bbac:EP01_13525 ATP-dependent RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpr.637 rpr:RP669 ATP-dependent RNA helicase RHLE (rhlE)
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpo.635 rpo:MA1_03205 ATP-dependent RNA helicase RHLE (rhlE)
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpw.634 rpw:M9W_03210 ATP-dependent RNA helicase RHLE (rhlE)
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpz.628 rpz:MA3_03250 ATP-dependent RNA helicase RHLE (rhlE)
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rps.633 rps:M9Y_03215 ATP-dependent RNA helicase RHLE (rhlE)
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpv.628 rpv:MA7_03205 ATP-dependent RNA helicase RHLE (rhlE)
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpq.721 rpq:rpr22_CDS646 rhlE; ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpl.848 rpl:H375_8640 Cold shock-like protein CspA
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_prowazekii.916 rpn.317 rpn:H374_3860 Cold shock-like protein CspA
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_typhi.594 rty.633 rty:RT0661 rhlE; probable ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_typhi.594 rtt.635 rtt:RTTH1527_03180 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_typhi.594 rtb.636 rtb:RTB9991CWPP_03185 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_canadensis.720 rcm.851 rcm:A1E_04425 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_canadensis.720 rcc.786 rcc:RCA_04070 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_bellii.48 rbe.1046 rbe:RBE_1076 rhlE; ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_bellii.48 rbo.361 rbo:A1I_01955 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rco.1020 rco:RC1020 rhlE; ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rfe.311 rfe:RF_0264 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rak.942 rak:A1C_05185 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rri.1012 rri:A1G_05625 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrj.1051 rrj:RrIowa_1212 ATP-dependent RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rra.1025 rra:RPO_05690 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrc.1029 rrc:RPL_05670 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrh.1021 rrh:RPM_05660 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrb.221 rrb:RPN_01355 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrn.1017 rrn:RPJ_05635 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrp.993 rrp:RPK_05615 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrm.1011 rrm:RRM_05300 DEAD/DEAH box helicase
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_rickettsii.31 rrr.1001 rrr:RRR_05270 DEAD/DEAH box helicase
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_massiliae.333 rms.736 rms:RMA_1053 rhlE; ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_massiliae.333 rmi.450 rmi:RMB_02845 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rpk.752 rpk:RPR_06305 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   raf.792 raf:RAF_ORF0925 rhlE; ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rhe.984 rhe:Rh054_05620 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rja.743 rja:RJP_0773 rhlE; ATP-dependent RNA helicase rhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_slovaca.140 rsv.133 rsv:Rsl_1177 rhlE; ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_slovaca.140 rsw.1020 rsw:MC3_05680 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rph.1021 rph:RSA_05655 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rau.445 rau:MC5_02730 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rmo.409 rmo:MCI_02305 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rpp.1007 rpp:MC1_05695 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rre.1031 rre:MCC_06265 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_amblyommatis.879 ram.1084 ram:MCE_06660 ATP-dependent RNA helicase RhlE
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047 Rickettsia_amblyommatis.879 rab.882 rab:AL573_06070 DEAD/DEAH box helicase
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095 Rickettsia.2047   rmc.1235 rmc:RMONA_08370 cshA; DEAD-box ATP-dependent RNA helicase CshA
OC.12884 Bacteria.405163 Proteobacteria.129049 Alphaproteobacteria.159095     ptc.152 ptc:phytr_10910 DEAD/DEAH box helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144843 Wolbachia.692   wol.1042 wol:WD_1236 ATP-dependent RNA helicase, DeaD/DeaH box family
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144843 Wolbachia.692   wri.896 wri:WRi_012100 ATP-dependent RNA helicase, DeaD/DeaH box family
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144843 Wolbachia.692   wen.917 wen:wHa_10300 ATP-dependent RNA helicase, DeaD/DeaH box family
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144843 Wolbachia.692   wed.579 wed:wNo_06360 ATP-dependent RNA helicase, DeaD/DeaH box family
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144843 Wolbachia.692   wpi.882 wpi:WP1078 ATP-dependent RNA helicase, DeaD/DeaH box family
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144843 Wolbachia.692   wbm.702 wbm:Wbm0708 Superfamily II DNA/RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144843 Wolbachia.692   wcl.588 wcl:WCLE_007670 rhlE; ATP-dependent RNA helicase DeaD/DeaH box family
OC.12884 Bacteria.405163 Proteobacteria.359245 Alphaproteobacteria.144844     rbt.427 rbt:NOVO_02300 putative DEAD-box ATP-dependent RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144842     eaa.276 eaa:I862_01125 ATP-dependent RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144842 Pelagibacter.1525   pub.162 pub:SAR11_0164 rlhE; probable ATP-dependent RNA helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144842 Pelagibacter.1008   pel.861 pel:SAR11G3_00863 cold-shock DEAD-box protein A
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144842     apm.458 apm:HIMB5_00004590 helicase family protein,DEAD/DEAH box helicase
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144842 Micavibrio.1486   mai.456 mai:MICA_1415 DEAD/DEAH box helicase family protein
OC.12884 Bacteria.405163 Proteobacteria.111167 Alphaproteobacteria.144842 Micavibrio.1486   man.379 man:A11S_1347 Cold-shock DEAD-box protein A
OC.12884 Bacteria.405163 Bacteroidetes.132066       aas.1057 aas:Aasi_1916 hypothetical protein
OC.12884 Bacteria.405163 Bacteroidetes.48881 Cardinium.375     che.636 che:CAHE_0677 cshA; DEAD box RNA helicase
OC.12884 Bacteria.405163 Bacteroidetes.48881 Cardinium.375     cec.484 cec:CE557_559 DEAD box RNA helicase
OC.12884 Bacteria.405163 Bacteroidetes.48881 Cardinium.375     cher.746 cher:DK880_00898 dbpA; ATP-dependent RNA helicase DbpA

( plain text of OC.12884 ) ( previous ver. )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.12753 (3) OC.12754 (2) OC.12755...12874 OC.12875 (17) OC.12876 (146) OC.12877 (5) OC.12878 (2) OC.12879 (1) OC.12880 (448) OC.12881 (809) OC.12882 (1) OC.12883 (2) OC.12884 (67) OC.12885 (11) OC.12886 (4) OC.12887 (1) OC.12888 (1) OC.12889 (1) OC.12890-12891 OC.12892 (18) OC.12893 (2) OC.12894-12898 OC.12899 (1) OC.12900 (2) OC.12901 (1) OC.12902-12958