ID or terms query

OC.250038 - OC.250111 [Actinobacteria] (63 sequences)

OC Root 2nd 3rd 4th 5th PC Gene/Definition
OC.250038 Bacteria.947 Actinobacteria.99823     rsa.189 rsa:RSal33209_0183 glutarate-CoA ligase
OC.250040 Bacteria.688166 Actinobacteria.288277     rsa.2025 rsa:RSal33209_2141 alpha-methylacyl-CoA racemase; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4]
OC.250041 Bacteria.917 Actinobacteria.193634 Frankia.12134   fal.3351 fal:FRAAL3495 putative Formyl-CoA transferase; K07749 formyl-CoA transferase [EC:2.8.3.16]
OC.250050 Bacteria.361322 Actinobacteria.77997 Streptomyces.109241   src.9674 src:M271_49655 hypothetical protein
OC.250055 Bacteria.912 Actinobacteria.102719 Amycolatopsis.27245   aoi.6572 aoi:AORI_6612 L-carnitine dehydratase/bile acid-inducible protein F
OC.250055 Bacteria.912 Actinobacteria.102719 Salinispora.5523   stp.2744 stp:Strop_2800 L-carnitine dehydratase/bile acid-inducible protein F; K07749 formyl-CoA transferase [EC:2.8.3.16]
OC.250055 Bacteria.912 Actinobacteria.102719     vma.1454 vma:VAB18032_07135 L-carnitine dehydratase/bile acid-inducible protein F; K07749 formyl-CoA transferase [EC:2.8.3.16]
OC.250057 Bacteria.886 Actinobacteria.143818 Rhodococcus.26110   rav.87 rav:AAT18_00360 formyl-CoA transferase
OC.250057 Bacteria.886 Actinobacteria.143818 Streptomyces.109289   src.9781 src:M271_50220 hypothetical protein
OC.250057 Bacteria.886 Actinobacteria.143818 Pseudarthrobacter.7272   psul.262 psul:AU252_01050 hypothetical protein
OC.250060 Bacteria.921 Actinobacteria.245935 Streptomyces.88944   salj.6218 salj:SMD11_6381 hypothetical protein
OC.250062 Bacteria.884 Actinobacteria.219499 Planktophila.2403   pvs.1255 pvs:A1sIA79_06510 CoA-transferase family III protein
OC.250069 Bacteria.323165 Actinobacteria.100585 Streptomyces.56774 Streptomyces_sp_.33521 strd.4318 strd:NI25_23140 CoA-transferase
OC.250069 Bacteria.323165 Actinobacteria.100585 Streptomyces.56774   sco.3173 sco:SCO3130 SCE66.09; dehydratase
OC.250069 Bacteria.323165 Actinobacteria.100585 Streptomyces.56774   slv.4309 slv:SLIV_22030 dehydratase
OC.250069 Bacteria.323165 Actinobacteria.100585 Streptomyces.56774   samb.3185 samb:SAM23877_3180 Dehydratase
OC.250069 Bacteria.323165 Actinobacteria.100585 Streptomyces.56774   spav.2663 spav:Spa2297_13590 CoA-transferase
OC.250069 Bacteria.323165 Actinobacteria.100585 Nocardiopsis.5928   nda.1256 nda:Ndas_1193 L-carnitine dehydratase/bile acid-inducible protein F
OC.250069 Bacteria.323165 Actinobacteria.100585 Amycolatopsis.20912   aab.4118 aab:A4R43_21195 CoA-transferase
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606 Rhodococcus_sp_.7660 rhod.2003 rhod:AOT96_09920 formyl-CoA transferase
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606 Rhodococcus_sp_.15485 rhq.3403 rhq:IM25_17320 formyl-CoA transferase
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606   rha.3087 rha:RHA1_ro02939 L-carnitine dehydratase
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606 Rhodococcus_erythropolis.4754 rer.5901 rer:RER_59110 conserved hypothetical protein
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606 Rhodococcus_erythropolis.4754 rey.5616 rey:O5Y_28455 hypothetical protein
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606 Rhodococcus_erythropolis.4754 reb.5624 reb:XU06_28785 formyl-CoA transferase
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606 Rhodococcus_opacus.7536 roa.7087 roa:Pd630_LPD07173 CaiB/baiF CoA-transferase family protein C7orf10
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606 Rhodococcus_opacus.10201 rop.2743 rop:ROP_26630 CaiB/BaiF family protein
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606   rpy.1043 rpy:Y013_03380 CoA transferase
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606   rqi.5844 rqi:C1M55_30270 CoA transferase
OC.250076 Bacteria.852 Actinobacteria.114533 Rhodococcus.6606   rrt.2390 rrt:4535765_02449 frc_4; L-carnitine dehydratase
OC.250076 Bacteria.852 Actinobacteria.114533 Streptomyces.39451 Streptomyces_albus.4500 salb.4422 salb:XNR_4570 L-carnitine dehydratase
OC.250076 Bacteria.852 Actinobacteria.114533 Streptomyces.39451   src.9541 src:M271_48975 hypothetical protein
OC.250076 Bacteria.852 Actinobacteria.114533 Brevibacterium.2882   blin.735 blin:BLSMQ_0735 L-carnitine dehydratase/bile acid-inducible protein F
OC.250078 Bacteria.833 Actinobacteria.125297 Rhodococcus.23491 Rhodococcus_sp_.11769 rhod.6229 rhod:AOT96_31915 formyl-CoA transferase
OC.250078 Bacteria.833 Actinobacteria.125297 Rhodococcus.30945   rrz.3249 rrz:CS378_16865 CoA transferase
OC.250078 Bacteria.833 Actinobacteria.125297 Frankia.15478   fsy.2563 fsy:FsymDg_2995 Formyl-CoA transferase
OC.250078 Bacteria.833 Actinobacteria.125297 Pseudonocardia.11993   pdx.3894 pdx:Psed_4138 Formyl-CoA transferase
OC.250080 Bacteria.352661 Actinobacteria.155704     psai.5 psai:C3B54_111275 formyl-CoA transferase-like protein
OC.250080 Bacteria.352661 Actinobacteria.155704     psai.5 psai:C3B54_111268 formyl-CoA transferase-like enzmye
OC.250084 Bacteria.648995 Actinobacteria.224228 Rhodococcus.8234 Rhodococcus_erythropolis.6110 reb.5751 reb:XU06_29470 acyl-CoA transferase
OC.250084 Bacteria.648995 Actinobacteria.224228 Rhodococcus.8234 Rhodococcus_opacus.8524 roa.8427 roa:Pd630_LPD13063 CaiB/baiF CoA-transferase family protein
OC.250085 Bacteria.944 Actinobacteria.228307 Rhodococcus.27965   rha.989 rha:RHA1_ro00763 probable formyl-CoA transferase; K07749 formyl-CoA transferase [EC:2.8.3.16]
OC.250086 Bacteria.816 Actinobacteria.139188 Mycolicibacterium.24606   mgo.3731 mgo:AFA91_19615 hypothetical protein
OC.250086 Bacteria.816 Actinobacteria.139188 Streptomyces.104144   smal.7787 smal:SMALA_7845 L-carnitine dehydratase/bile acid-inducible protein F
OC.250086 Bacteria.816 Actinobacteria.139188 Pseudonocardia.7210 Pseudonocardia_sp_.6698 phh.1813 phh:AFB00_09725 hypothetical protein
OC.250086 Bacteria.816 Actinobacteria.139188     pmad.1981 pmad:BAY61_09965 hypothetical protein
OC.250087 Bacteria.362373 Actinobacteria.145555 Rhodococcus.17219   rav.4604 rav:AAT18_24800 CaiB/BaiF family protein
OC.250087 Bacteria.362373 Actinobacteria.145555 Rhodococcus.17219   rrz.2769 rrz:CS378_14365 CoA transferase
OC.250087 Bacteria.362373 Actinobacteria.145555     psim.3656 psim:KR76_22170 CaiB/BaiF family protein
OC.250087 Bacteria.362373 Actinobacteria.145555     tfu.1283 tfu:Tfu_1288 conserved hypothetical protein
OC.250089 Bacteria.791 Actinobacteria.223420 Pseudonocardia.12004   pdx.3909 pdx:Psed_4153 Formyl-CoA transferase
OC.250090 Bacteria.890 Actinobacteria.223300 Pseudonocardia.11455   pdx.3054 pdx:Psed_3208 Formyl-CoA transferase
OC.250093 Bacteria.303525 Actinobacteria.229103 Rhodococcus.29496   rha.8619 rha:RHA1_ro11187 possible fatty acid-CoA racemase
OC.250094 Bacteria.324917 Actinobacteria.67608 Rhodococcus.22106 Rhodococcus_opacus.13053 rop.7870 rop:ROP_pROB02-01040 fatty acid-CoA racemase
OC.250095 Bacteria.324928 Actinobacteria.67593 Rhodococcus.23476 Rhodococcus_sp_.11750 rhod.6210 rhod:AOT96_31815 hypothetical protein; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4]
OC.250099 Bacteria.303514 Actinobacteria.145932 Rhodococcus.29992   rqi.1171 rqi:C1M55_05930 CoA transferase
OC.250099 Bacteria.303514 Actinobacteria.145932 Streptomyces.100809   slau.7284 slau:SLA_7462 acyl-CoA transferase/carnitine dehydratase
OC.250100 Bacteria.919 Actinobacteria.226347 Rhodococcus.21202 Rhodococcus_opacus.10293 rop.2930 rop:ROP_28600 hypothetical protein
OC.250101 Bacteria.811 Actinobacteria.229271 Rhodococcus.29791   rpy.4345 rpy:Y013_23860 L-carnitine dehydratase
OC.250103 Bacteria.651851 Actinobacteria.228238 Rhodococcus.27838   rha.581 rha:RHA1_ro00304 possible acyl-CoA transferase, N-terminal
OC.250105 Bacteria.647480 Actinobacteria.221574 Pseudarthrobacter.7330   psul.321 psul:AU252_01595 hypothetical protein
OC.250108 Bacteria.650039 Actinobacteria.225728 Rhodococcus.19919 Rhodococcus_opacus.7217 roa.6423 roa:Pd630_LPD06490 CaiB/baiF CoA-transferase family protein
OC.250110 Bacteria.362458 Actinobacteria.228239 Rhodococcus.27839   rha.582 rha:RHA1_ro00305 possible CoA-transferase, C-terminal

( plain text of OC.250038 - OC.250111 [Actinobacteria] ) ( previous ver. )

KOs in cluster

    K07749 (4) formyl-CoA transferase [EC:2.8.3.16]
    K01796 (2) alpha-methylacyl-CoA racemase [EC:5.1.99...

> Pathway search
> BRITE search

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.250011 (1) OC.250012 (1) OC.250013 (1) OC.250014 (1) OC.250015 (1) OC.250016-250017 OC.250018 (3) OC.250019-250032 OC.250033 (1) OC.250034 (1) OC.250035-250036 OC.250037 (1) OC.250038 (1) OC.250039 (1) OC.250040 (1) OC.250041 (5) OC.250042-250108 OC.250109 (11) OC.250110 (1) OC.250111 (1) OC.250112...250512