ID or terms query

OC.3058 (84 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.3058 Bacteria.7426 Proteobacteria.243330 Betaproteobacteria.37930 Hydrogenophaga.395   hyr.2697 hyr:BSY239_3488 sensory box protein
OC.3058 Bacteria.7426 Proteobacteria.243330 Betaproteobacteria.37930 Hydrogenophaga.395   hyb.163 hyb:Q5W_00465 hypothetical protein
OC.3058 Bacteria.7158 Proteobacteria.3875 Betaproteobacteria.182159 Hydrogenophaga.6966   hyl.3171 hyl:LPB072_16490 hypothetical protein
OC.3058 Bacteria.7426 Proteobacteria.243330 Betaproteobacteria.37930 Hydrogenophaga.395   hyl.3841 hyl:LPB072_19985 hypothetical protein
OC.3058 Bacteria.7818 Proteobacteria.483521 Betaproteobacteria.130722     rdp.3181 rdp:RD2015_3936 histidine kinase
OC.3058 Bacteria.7818 Proteobacteria.483521 Betaproteobacteria.130722     rgu.1572 rgu:A4W93_07940 hypothetical protein
OC.3058 Bacteria.8329 Proteobacteria.551532 Deltaproteobacteria.3319 Geobacter.4210   gbm.1676 gbm:Gbem_1701 sensor histidine kinase response regulator, PAS domain-containing
OC.3058 Bacteria.7797 Proteobacteria.4342 Deltaproteobacteria.3256 Geobacter.9718   geo.3675 geo:Geob_3808 sensor histidine kinase response regulator, HAMP and S-box domain-containing
OC.3058 Bacteria.8329 Proteobacteria.551532 Deltaproteobacteria.3319 Geobacter.4210 Geobacter_sp_.5777 gem.2470 gem:GM21_2521 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7164 Proteobacteria.4341 Deltaproteobacteria.3257 Pelobacter.7825   ppd.2966 ppd:Ppro_3150 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8218 Proteobacteria.4350 Deltaproteobacteria.3309 Desulfovibrio.4926 Desulfovibrio_vulgaris.1021 dvu.2095 dvu:DVU2129 sensory box histidine kinase/response regulator
OC.3058 Bacteria.8218 Proteobacteria.4350 Deltaproteobacteria.3309 Desulfovibrio.4926 Desulfovibrio_vulgaris.1021 dvl.1131 dvl:Dvul_1102 signal transduction histidine kinase, nitrogen specific, NtrB
OC.3058 Bacteria.8218 Proteobacteria.4350 Deltaproteobacteria.3309 Desulfovibrio.4926 Desulfovibrio_vulgaris.1021 dvm.2694 dvm:DvMF_2731 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8218 Proteobacteria.4350 Deltaproteobacteria.3309 Desulfovibrio.4926 Desulfovibrio_vulgaris.1021 dvg.1949 dvg:Deval_1979 signal transduction histidine kinase, nitrogen specific, NtrB
OC.3058 Bacteria.8218 Proteobacteria.4350 Deltaproteobacteria.3309 Desulfovibrio.4926   dde.2012 dde:Dde_2370 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8218 Proteobacteria.4350 Deltaproteobacteria.3274 Desulfovibrio.23079   dma.3131 dma:DMR_33730 two-component hybrid sensor and regulator
OC.3058 Bacteria.7248 Proteobacteria.4377 Deltaproteobacteria.3253     dps.2337 dps:DP2391 probable two-component system sensory/regulatory protein (Ntr family)
OC.3058 Bacteria.7808 Proteobacteria.4576 Deltaproteobacteria.3281     dak.106 dak:DaAHT2_0051 integral membrane sensor hybrid histidine kinase
OC.3058 Bacteria.7253 Proteobacteria.4454 Deltaproteobacteria.3310 Desulfobulbus.2765   dpr.848 dpr:Despr_0841 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8522 Proteobacteria.4855 Deltaproteobacteria.3308 Desulfobulbus.2892   dpr.1067 dpr:Despr_1068 signal transduction histidine kinase, nitrogen specific, NtrB
OC.3058 Bacteria.8049 Proteobacteria.4340 Deltaproteobacteria.3263 Desulfobulbus.2989   dpr.1187 dpr:Despr_1205 signal transduction histidine kinase, nitrogen specific, NtrB
OC.3058 Bacteria.7534 Proteobacteria.4337 Deltaproteobacteria.3264 Desulfobulbus.3353   dpr.1649 dpr:Despr_1735 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.7627 Proteobacteria.4453 Deltaproteobacteria.3275 Desulfobulbus.3838   dpr.2377 dpr:Despr_2510 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.6948 Proteobacteria.4333 Deltaproteobacteria.3285     dsf.6 dsf:UWK_00116 PAS domain S-box
OC.3058 Bacteria.7259 Proteobacteria.4781 Deltaproteobacteria.3272     dsf.990 dsf:UWK_00998 PAS domain S-box
OC.3058 Bacteria.8063 Proteobacteria.4824 Deltaproteobacteria.3307     dsf.1258 dsf:UWK_01298 histidine kinase/response regulator receiver domain-containing protein
OC.3058 Bacteria.8502 Proteobacteria.4356 Deltaproteobacteria.3290     dsf.1290 dsf:UWK_01333 PAS domain S-box
OC.3058 Bacteria.7799 Proteobacteria.4378 Deltaproteobacteria.3284     dsf.3053 dsf:UWK_03217 PAS domain S-box
OC.3058 Bacteria.7914 Proteobacteria.595023 Deltaproteobacteria.105155     dal.388 dal:Dalk_0146 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8136 Proteobacteria.4334 Deltaproteobacteria.3289     dal.24 dal:Dalk_0161 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7826 Proteobacteria.5832 Deltaproteobacteria.3265     dal.49 dal:Dalk_0297 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7904 Proteobacteria.4800 Deltaproteobacteria.3283     dal.671 dal:Dalk_0463 histidine kinase
OC.3058 Bacteria.7826 Proteobacteria.5832 Deltaproteobacteria.3265     dal.49 dal:Dalk_0706 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8501 Proteobacteria.4332 Deltaproteobacteria.3304     dal.947 dal:Dalk_0758 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7639 Proteobacteria.4575 Deltaproteobacteria.3262     dal.1308 dal:Dalk_1165 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.6950 Proteobacteria.4348 Deltaproteobacteria.3303     dal.25 dal:Dalk_1424 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7907 Proteobacteria.551530 Deltaproteobacteria.3313     dal.1562 dal:Dalk_1441 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8502 Proteobacteria.4356 Deltaproteobacteria.3306     dal.1609 dal:Dalk_1498 histidine kinase
OC.3058 Bacteria.8501 Proteobacteria.4332 Deltaproteobacteria.3304     dal.28 dal:Dalk_1499 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7627 Proteobacteria.4343 Deltaproteobacteria.3301     dal.1692 dal:Dalk_1590 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7628 Proteobacteria.4349 Deltaproteobacteria.3280     dal.2000 dal:Dalk_1935 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.8136 Proteobacteria.4334 Deltaproteobacteria.3289     dal.22 dal:Dalk_2046 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.6949 Proteobacteria.4345 Deltaproteobacteria.3302     dal.2114 dal:Dalk_2075 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8136 Proteobacteria.4334 Deltaproteobacteria.3289     dal.22 dal:Dalk_2150 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8501 Proteobacteria.4332 Deltaproteobacteria.3304     dal.23 dal:Dalk_2300 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7245 Proteobacteria.4355 Deltaproteobacteria.3278     dal.3136 dal:Dalk_3270 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8136 Proteobacteria.4334 Deltaproteobacteria.3289     dal.22 dal:Dalk_3291 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7826 Proteobacteria.5832 Deltaproteobacteria.3265     dal.49 dal:Dalk_3661 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7826 Proteobacteria.5832 Deltaproteobacteria.3265     dal.49 dal:Dalk_4237 histidine kinase
OC.3058 Bacteria.7370 Proteobacteria.4652 Deltaproteobacteria.3270     dal.4904 dal:Dalk_5267 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7628 Proteobacteria.4349 Deltaproteobacteria.3312     dat.831 dat:HRM2_07890 two domain sensory box histidine kinase (methyl-accepting chemotaxis transducer/Ntr-family protein)
OC.3058 Bacteria.7095 Proteobacteria.4344 Deltaproteobacteria.3267     dat.3139 dat:HRM2_32530 predicted fusion protein, periplasmic substrate-binding protein (N-terminal) / sensory box regulatory protein (C-terminal)
OC.3058 Bacteria.7913 Proteobacteria.5798 Deltaproteobacteria.3269     dto.186 dto:TOL2_C00040 putative sensor histidine kinase
OC.3058 Bacteria.7095 Proteobacteria.4354 Deltaproteobacteria.3271     dto.466 dto:TOL2_C03310 sensor histidine kinase protein containing receiver region
OC.3058 Bacteria.7628 Proteobacteria.4349 Deltaproteobacteria.3280     dto.62 dto:TOL2_C04680 predicted two component system sensor kinase, hybrid
OC.3058 Bacteria.7628 Proteobacteria.4349 Deltaproteobacteria.3280     dto.62 dto:TOL2_C10950 two component system sensor histidine kinase, hybrid
OC.3058 Bacteria.7913 Proteobacteria.5798 Deltaproteobacteria.3269     dto.1502 dto:TOL2_C15090 predicted two component system sensor histidine kinase
OC.3058 Bacteria.7628 Proteobacteria.4349 Deltaproteobacteria.3280     dto.3573 dto:TOL2_C39350 two component system sensor histidine kinase, hybrid
OC.3058 Bacteria.7164 Proteobacteria.4341 Deltaproteobacteria.3257     dto.3777 dto:TOL2_C41470 two component system sensor histidine kinase, hybrid
OC.3058 Bacteria.7250 Proteobacteria.4405 Deltaproteobacteria.3299     dao.567 dao:Desac_0517 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.8049 Proteobacteria.4340 Deltaproteobacteria.3288     sfu.2353 sfu:Sfum_2379 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8049 Proteobacteria.4340 Deltaproteobacteria.3263     sfu.2873 sfu:Sfum_2943 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8049 Proteobacteria.4340 Deltaproteobacteria.3288     sfu.165 sfu:Sfum_3740 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.8049 Proteobacteria.4340 Deltaproteobacteria.3288     sfu.165 sfu:Sfum_3741 putative PAS/PAC sensor protein
OC.3058 Bacteria.7534 Proteobacteria.551529 Deltaproteobacteria.3282     dbr.111 dbr:Deba_0019 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.8049 Proteobacteria.4340 Deltaproteobacteria.3277     dbr.213 dbr:Deba_0132 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.7095 Proteobacteria.4353 Deltaproteobacteria.3251     dbr.257 dbr:Deba_0181 PAS/PAC sensor signal transduction histidine kinase
OC.3058 Bacteria.7359 Proteobacteria.4351 Deltaproteobacteria.3260     dbr.323 dbr:Deba_0250 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.7164 Proteobacteria.4352 Deltaproteobacteria.3314     dbr.459 dbr:Deba_0392 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.8049 Proteobacteria.4340 Deltaproteobacteria.3311     dbr.682 dbr:Deba_0630 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.6861 Proteobacteria.4331 Deltaproteobacteria.3273     dbr.1973 dbr:Deba_1995 multi-sensor hybrid histidine kinase
OC.3058 Bacteria.7969 Proteobacteria.4393 Alphaproteobacteria.321325     mgm.1706 mgm:Mmc1_1796 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7657 Verrucomicrobia.3538       obg.423 obg:Verru16b_00395 Blue-light-activated protein
OC.3058 Bacteria.7272 Verrucomicrobia.11504       obg.2078 obg:Verru16b_02169 Blue-light-activated protein
OC.3058 Bacteria.7118 Verrucomicrobia.16035       vba.1048 vba:IMCC26134_05970 hypothetical protein
OC.3058 Bacteria.7657 Verrucomicrobia.3538       vbh.7 vbh:CMV30_01480 hypothetical protein
OC.3058 Bacteria.7657 Verrucomicrobia.3538       vbh.7 vbh:CMV30_05790 hypothetical protein
OC.3058 Bacteria.7657 Verrucomicrobia.3538       vbh.7 vbh:CMV30_05810 hybrid sensor histidine kinase/response regulator
OC.3058 Bacteria.7273 Verrucomicrobia.16955       vbh.1863 vbh:CMV30_09550 hybrid sensor histidine kinase/response regulator
OC.3058 Bacteria.7274         vbl.937 vbl:L21SP4_00974 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensors
OC.3058 Bacteria.7384 Spirochaetes.38011       tpx.2264 tpx:Turpa_2345 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7665 Chlorobi.10978       cts.2633 cts:Ctha_2726 PAS/PAC sensor hybrid histidine kinase
OC.3058 Bacteria.7274         caby.1152 caby:Cabys_1973 PAS domain S-box-containing protein
OC.3058 Bacteria.6912 Nitrospirae.10342 Nitrospira.6923     nmv.332 nmv:NITMOv2_0173 putative Histidine kinase

( plain text of OC.3058 ) ( previous ver. )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.3055 (1) OC.3056 (182) OC.3057 (2) OC.3058 (84) OC.3059 (1) OC.3060 (5) OC.3061 (125) OC.3062-3063 OC.3064 (2) OC.3065 (34) OC.3066-3067 OC.3068 (1) OC.3069 (1) OC.3046-3054 OC.3070 (1)