ID or terms query

Gammaproteobacteria.136572 (25 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Rahnella.3257   rah.2361 rah:Rahaq_2401 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Rahnella.3257 Rahnella_aquatilis.5681 raq.2118 raq:Rahaq2_2222 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Rahnella.3257 Rahnella_aquatilis.4112 raa.2375 raa:Q7S_12160 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328     rox.1327 rox:BV494_06650 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   eta.3007 eta:ETA_30620 Putative sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_pyrifoliae.2287 epy.3125 epy:EpC_32660 sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_pyrifoliae.2287 epr.3416 epr:EPYR_03512 Heme-regulated cyclic AMP phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_amylovora.2148 eam.3259 eam:EAMY_3268 Heme-regulated cyclic AMP phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_amylovora.2148 eay.334 eay:EAM_0335 putative signal transduction protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   ebi.395 ebi:EbC_03720 Putative sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   erj.755 erj:EJP617_07490 sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.11768   ege.2966 ege:EM595_2984 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   epe.3138 epe:CI789_16690 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_vagans.2635 pva.2559 pva:Pvag_2617 Heme-regulated cyclic AMP phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_vagans.2635 pagg.3790 pagg:AL522_20235 bifunctional diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_sp_.10730 pao.3352 pao:Pat9b_3336 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121   kln.1051 kln:LH22_05635 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_sp_.5427 pant.554 pant:PSNIH1_02840 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120 Pantoea_sp_.1395 panp.283 panp:PSNIH2_01425 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121   pagc.689 pagc:BEE12_03670 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120   palh.2026 palh:B1H58_10700 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120   pgz.3290 pgz:C2E15_17625 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120   pcd.3276 pcd:C2E16_17605 PAS domain S-box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Pseudomonas.75752     prh.3680 prh:LT40_20100 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Pseudomonas.61309 Pseudomonas_sp_.26568   pses.4729 pses:PSCI_4801 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase

( plain text of OC.1592 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.1568 (2) OC.1569 (1) OC.1570 (3) OC.1571 (7) OC.1572 (1) OC.1573 (1) OC.1574 (10) OC.1575-1586 OC.1587 (1) OC.1588 (1) OC.1589 (234) OC.1590 (14) OC.1591 (2) OC.1592 (394) OC.1593 (3) OC.1594 (1) OC.1502-1567 OC.1595...1875