ID or terms query


Bacteria.299809 (32 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.411244 Bacteria.299809 Proteobacteria.328113 Gammaproteobacteria.193320 Pseudomonas.32839 Pseudomonas_chlororaphis.3640 pch.4896 pch:EY04_25815 FAD-dependent oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Proteobacteria.328113 Gammaproteobacteria.193320 Pseudomonas.32839 Pseudomonas_chlororaphis.3640 pcz.1178 pcz:PCL1606_11740 FAD dependent oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Proteobacteria.328113 Gammaproteobacteria.193320 Pseudomonas.32839 Pseudomonas_chlororaphis.3640 pcp.1121 pcp:JM49_05865 FAD-dependent oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Proteobacteria.328113 Gammaproteobacteria.193320 Pseudomonas.32839 Pseudomonas_sp_.20950 psem.4925 psem:TO66_25870 FAD-dependent oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Proteobacteria.280809 Deltaproteobacteria.46259 Sorangium.5379   scl.799 scl:sce0611 crtI2; putative Phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Proteobacteria.583867 Deltaproteobacteria.90512 Sorangium.7171   scl.3401 scl:sce3350 crtI3; putative phytoene dehydrogenase
OC.411244 Bacteria.299809 Proteobacteria.280809 Deltaproteobacteria.46259 Sorangium.5379   scu.1064 scu:SCE1572_04195 hypothetical protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Proteobacteria.280809 Deltaproteobacteria.46259     samy.3374 samy:DB32_003351 Phytoene desaturase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Proteobacteria.280809 Deltaproteobacteria.46259     mrm.8392 mrm:A7982_08722 Phytoene desaturase, neurosporene or lycopene producing; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.139067 Mycolicibacterium.19202     mcb.1187 mcb:Mycch_1101 phytoene dehydrogenase-like oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Mycobacteroides.8013     mste.1993 mste:MSTE_02045 phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Nocardia.22499     ntp.3892 ntp:CRH09_20455 FAD-dependent oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.139067 Rhodococcus.26216     rav.847 rav:AAT18_04545 phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701     sbh.983 sbh:SBI_00884 All-trans-retinol 13,14-reductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701 Streptomyces_hygroscopicus.5135   shy.5868 shy:SHJG_5939 putative phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701 Streptomyces_hygroscopicus.5135   sho.5679 sho:SHJGH_5701 putative phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701     spri.136 spri:SPRI_0136 hypothetical protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701     spri.136 spri:SPRI_7217 hypothetical protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701     sgs.246 sgs:AVL59_00750 phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701     sauo.6126 sauo:BV401_33035 phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701     ssia.3150 ssia:A7J05_16465 phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Streptomyces.46701     smal.5804 smal:SMALA_5829 All-trans-retinol 13,14-reductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Kitasatospora.19498     ksk.6364 ksk:KSE_66010 putative oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Kitasatospora.11666     kau.2451 kau:B6264_12910 phytoene dehydrogenase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Aeromicrobium.4438     aez.2582 aez:C3E78_13425 NAD(P)/FAD-dependent oxidoreductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047       sro.4012 sro:Sros_4146 All-trans-retinol 13,14-reductase; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Amycolatopsis.2893 Amycolatopsis_mediterranei.3289   amd.3982 amd:AMED_4029 phytoene dehydrogenase-related protein
OC.411244 Bacteria.299809 Actinobacteria.94047 Amycolatopsis.2893 Amycolatopsis_mediterranei.3289   amn.4096 amn:RAM_20535 phytoene dehydrogenase-related protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Amycolatopsis.2893 Amycolatopsis_mediterranei.3289   amm.3982 amm:AMES_3981 phytoene dehydrogenase-related protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Amycolatopsis.2893 Amycolatopsis_mediterranei.3289   amz.3982 amz:B737_3981 phytoene dehydrogenase-related protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Actinobacteria.94047 Amycolatopsis.15057 Amycolatopsis_sp_.2859   amyb.2472 amyb:BKN51_12670 hypothetical protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23]
OC.411244 Bacteria.299809 Verrucomicrobia.10633       min.2114 min:Minf_2240 Phytoene dehydrogenase or related enzyme

( plain text of OC.411244 )

Refinement of cluster

OC depth

KOs in cluster

    K09516 (29) all-trans-retinol 13,14-reductase [EC:1....

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Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.411239 (17) OC.411240 (1) OC.411241 (1) OC.411242 (1) OC.411243 (42) OC.411244 (32) OC.411245 (23) OC.411246 (2) OC.411247 (14) OC.411248 (4) OC.411249 (4) OC.411216-411238 OC.411250...411409