ID or terms query

Bacteria.7084 (95 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Rahnella.3257   rah.2361 rah:Rahaq_2401 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Rahnella.3257 Rahnella_aquatilis.5681 raq.2118 raq:Rahaq2_2222 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Rahnella.3257 Rahnella_aquatilis.4112 raa.2375 raa:Q7S_12160 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328     rox.1327 rox:BV494_06650 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   eta.3007 eta:ETA_30620 Putative sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_pyrifoliae.2287 epy.3125 epy:EpC_32660 sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_pyrifoliae.2287 epr.3416 epr:EPYR_03512 Heme-regulated cyclic AMP phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_amylovora.2148 eam.3259 eam:EAMY_3268 Heme-regulated cyclic AMP phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513 Erwinia_amylovora.2148 eay.334 eay:EAM_0335 putative signal transduction protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   ebi.395 ebi:EbC_03720 Putative sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   erj.755 erj:EJP617_07490 sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.11768   ege.2966 ege:EM595_2984 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Erwinia.1513   epe.3138 epe:CI789_16690 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_vagans.2635 pva.2559 pva:Pvag_2617 Heme-regulated cyclic AMP phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_vagans.2635 pagg.3790 pagg:AL522_20235 bifunctional diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_sp_.10730 pao.3352 pao:Pat9b_3336 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121   kln.1051 kln:LH22_05635 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121 Pantoea_sp_.5427 pant.554 pant:PSNIH1_02840 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120 Pantoea_sp_.1395 panp.283 panp:PSNIH2_01425 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7121   pagc.689 pagc:BEE12_03670 3',5'-cyclic-nucleotide phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120   palh.2026 palh:B1H58_10700 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120   pgz.3290 pgz:C2E15_17625 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Gammaproteobacteria___Enterobacteria.42328 Pantoea.7120   pcd.3276 pcd:C2E16_17605 PAS domain S-box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2234   ppu.3602 ppu:PP_3711 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2234   ppf.2029 ppf:Pput_2057 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2234   ppg.2215 ppg:PputGB1_2227 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.21013   ppw.2236 ppw:PputW619_2231 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.16252   ppt.3106 ppt:PPS_3177 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2234   ppb.1992 ppb:PPUBIRD1_2055 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2234   ppi.5186 ppi:YSA_09468 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2234   ppx.1742 ppx:T1E_1748 tcsA; diguanylate cyclase/phosphodiesterase with and CheR activity
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.18174   ppuh.3141 ppuh:B479_15760 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2234   pput.3759 pput:L483_19265 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.2235   ppun.2117 ppun:PP4_21210 putative sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_putida.17386   ppud.3378 ppud:DW66_3448 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_monteilii.2079   pmon.2923 pmon:X969_15275 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_monteilii.2079   pmot.2860 pmot:X970_14920 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452     ppj.1507 ppj:RK21_01461 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452     pen.2106 pen:PSEEN2310 putative sensory box protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452 Pseudomonas_sp_.46488   psv.2184 psv:PVLB_10965 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Pseudomonas.75752     prh.3680 prh:LT40_20100 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136573 Pseudomonas.39452     psw.3181 psw:LK03_17420 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.136572 Pseudomonas.61309 Pseudomonas_sp_.26568   pses.4729 pses:PSCI_4801 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.165072 Kushneria.897     kus.964 kus:B9G99_05035 hypothetical protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.165072 Kushneria.897     kma.1946 kma:B9H00_10125 hypothetical protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Gammaproteobacteria.165072       saln.2182 saln:SALB1_2244 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Betaproteobacteria.160625 Burkholderia.67831 Burkholderia_sp_.42290   bum.6589 bum:AXG89_40240 hypothetical protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Betaproteobacteria.34205 Achromobacter.7385     adt.316 adt:APT56_01565 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Betaproteobacteria.34205 Achromobacter.7385     asw.873 asw:CVS48_04530 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Betaproteobacteria.34205 Achromobacter.7385     achr.1246 achr:C2U31_06315 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Betaproteobacteria.191141 Massilia.16648     mtim.2550 mtim:DIR46_13755 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.6370 Sinorhizobium_meliloti.6280   smk.5423 smk:Sinme_5639 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.6370 Sinorhizobium_meliloti.6280   smq.5065 smq:SinmeB_5246 diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.6370 Sinorhizobium_meliloti.6280   smx.3899 smx:SM11_pC0168 putative diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.6370 Sinorhizobium_meliloti.6280   smeg.3538 smeg:C770_GR4pB045 diguanylate cyclase (GGDEF) domain protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.984 Sinorhizobium_fredii.1464   rhi.3015 rhi:NGR_c04060 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.984 Sinorhizobium_fredii.1464   sfh.544 sfh:SFHH103_00474 Signaling protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.984 Sinorhizobium_fredii.1464   sfd.557 sfd:USDA257_c05060 putative signaling protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.6370 Sinorhizobium_fredii.7944   sfd.2678 sfd:USDA257_c27280 putative signaling protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.18436 Sinorhizobium_sp_.7770   six.1365 six:BSY16_2201 diguanylate cyclase domain protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.6370 Sinorhizobium_sp_.10193   six.3792 six:BSY16_4497 diguanylate cyclase domain protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.984     same.869 same:SAMCFNEI73_Ch0828 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Sinorhizobium.984 Sinorhizobium_sp_.2791   sino.2713 sino:SS05631_c04960 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Ensifer.839 Ensifer_adhaerens.368   ead.1402 ead:OV14_1721 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain precursor
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Ensifer.839 Ensifer_adhaerens.368   eah.495 eah:FA04_02095 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhizobium.9312 Rhizobium_etli.7867   rec.2734 rec:RHECIAT_CH0002785 putative sensory box/GGDEF family protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhizobium.9312 Rhizobium_leguminosarum.12241   rlt.2288 rlt:Rleg2_2311 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhizobium.9312 Rhizobium_leguminosarum.15628   rlu.4493 rlu:RLEG12_23080 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhizobium.9312     rpha.2711 rpha:AMC79_CH02801 GGDEF/EAL domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhizobium.27997 Rhizobium_sp_.23699   rhv.3747 rhv:BA939_19935 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhizobium.9312 Rhizobium_sp_.15982   rhk.2720 rhk:Kim5_CH02796 GGDEF/EAL domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Neorhizobium.7579     neo.1810 neo:CYG48_09270 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371       shz.789 shz:shn_03615 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Bradyrhizobium.22656     aol.378 aol:S58_03430 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhodopseudomonas.1495     rpa.2141 rpa:RPA2152 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS domain
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhodopseudomonas.1495     rpb.3235 rpb:RPB_3250 diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhodopseudomonas.1495     rpt.2390 rpt:Rpal_2444 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Rhodopseudomonas.1495     rpx.3292 rpx:Rpdx1_3374 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26367 Methylorubrum.10177     mpo.2073 mpo:Mpop_2088 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26367 Methylobacterium.13076     mrd.57 mrd:Mrad2831_3297 diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26367 Methylobacterium.13076     mrd.57 mrd:Mrad2831_6470 diguanylate cyclase/phosphodiesterase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.228547 Methylobacterium.11683     maqu.4143 maqu:Maq22A_c11460 histidine kinase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.228547 Methylobacterium.11683     mee.5490 mee:DA075_29480 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26367 Methylobacterium.20118 Methylobacterium_sp_.13564   metd.2231 metd:C0214_12040 GGDEF domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26367       aua.72 aua:M673_22060 hypothetical protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26367       aua.72 aua:M673_23505 hypothetical protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371       hdi.671 hdi:HDIA_0615 gmr_1; Cyclic di-GMP phosphodiesterase Gmr
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371       aex.3107 aex:Astex_3271 diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Novosphingobium.6230     npn.3602 npn:JI59_20930 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Novosphingobium.6230     nre.740 nre:BES08_03055 diguanylate cyclase
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Novosphingobium.8758 Novosphingobium_sp_.6593   nov.2537 nov:TQ38_012630 EAL domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Novosphingobium.6230 Novosphingobium_sp_.8191   nov.4235 nov:TQ38_022585 EAL domain-containing protein
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Gluconacetobacter.2234     gdi.3456 gdi:GDI3665 putative signalling protein, GGDEF family
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371 Gluconacetobacter.2234     gdj.2417 gdj:Gdia_2547 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
OC.1592 Bacteria.7084 Proteobacteria.3905 Alphaproteobacteria.26371       phr.2462 phr:C6569_12640 diguanylate cyclase

( plain text of OC.1592 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.1568 (2) OC.1569 (1) OC.1570 (3) OC.1571 (7) OC.1572 (1) OC.1573 (1) OC.1574 (10) OC.1575-1586 OC.1587 (1) OC.1588 (1) OC.1589 (234) OC.1590 (14) OC.1591 (2) OC.1592 (394) OC.1593 (3) OC.1594 (1) OC.1502-1567 OC.1595...1875