ID or terms query

Bacteroidetes.5629 (103 sequences)

OC Root 2nd 3rd 4th 5th PC Gene/Definition
OC.586261 Bacteria.156362 Bacteroidetes.5629 Bacteroides.14784   bacc.1462 bacc:BRDCF_p258 RNA Polymerase Sigma-24 Subunit ECF Subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Chitinophaga.8648   cpi.6055 cpi:Cpin_6371 RNA polymerase, sigma-24 subunit, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Chitinophaga.8671   cpi.6080 cpi:Cpin_6397 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     nko.575 nko:Niako_0337 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     nko.1913 nko:Niako_1828 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     nko.6164 nko:Niako_6639 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     nko.6808 nko:Niako_7338 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Niabella.822   nso.1399 nso:NIASO_07175 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Niabella.5551   nso.2724 nso:NIASO_14030 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Niabella.822   nia.2309 nia:A8C56_11890 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     fla.921 fla:SY85_04400 ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     fla.3008 fla:SY85_16630 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     fla.3164 fla:SY85_17500 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     fla.3529 fla:SY85_19590 RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     arb.109 arb:A9P82_00150 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     arb.696 arb:A9P82_03385 RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     fln.6097 fln:FLA_6434 RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     hhy.5166 hhy:Halhy_5503 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     hhy.5284 hhy:Halhy_5636 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     sgn.1159 sgn:SGRA_1035 rpoE; RNA polymerase, sigma-24 subunit, ecf subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.3038   phe.152 phe:Phep_0054 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.4836   phe.3171 phe:Phep_3302 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.3038   pep.119 pep:AQ505_00175 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.3038   pcm.842 pcm:AY601_0803 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.2697   pcm.4633 pcm:AY601_4922 ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.3038   psty.1001 psty:BFS30_04990 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.4836   psty.3942 psty:BFS30_20260 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.11488   psty.4224 psty:BFS30_21715 RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.7970   pgs.173 pgs:CPT03_00635 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.2697   pgs.2533 pgs:CPT03_13180 RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pedobacter.3038   pgs.3606 pgs:CPT03_18875 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     psn.2048 psn:Pedsa_2111 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Sphingobacterium.1416 Sphingobacterium_sp_.268 shg.2356 shg:Sph21_2411 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Sphingobacterium.6271 Sphingobacterium_sp_.6262 shg.4487 shg:Sph21_4656 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Sphingobacterium.1416 Sphingobacterium_sp_.268 sht.1597 sht:KO02_08790 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Sphingobacterium.1416 Sphingobacterium_sp_.268 sphn.2944 sphn:BV902_15785 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Sphingobacterium.1416   smiz.2168 smiz:4412673_02216 sigM_3; RNA polymerase sigma factor sigM; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     scn.991 scn:Solca_0999 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     scn.2928 scn:Solca_3179 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     scn.3269 scn:Solca_3541 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.2612 Mucilaginibacter_sp_.851 mup.514 mup:A0256_02435 RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.12 Mucilaginibacter_sp_.1010 mup.4054 mup:A0256_21630 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.788 Mucilaginibacter_sp_.2422 muc.884 muc:MuYL_0865 RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.2612 Mucilaginibacter_sp_.851 muc.3236 muc:MuYL_3279 RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.12 Mucilaginibacter_sp_.1010 muc.3610 muc:MuYL_3661 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.788   mgot.460 mgot:MgSA37_00389 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.12   mgot.1581 mgot:MgSA37_01586 rpoE_2; ECF RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Mucilaginibacter.2612   mgot.3212 mgot:MgSA37_03290 sigE_2; ECF RNA polymerase sigma factor SigE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     sbx.2417 sbx:CA265_12890 RNA polymerase; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     sbx.4388 sbx:CA265_23205 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Cyclobacterium.3754   cmr.1104 cmr:Cycma_1079 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Cyclobacterium.3754   camu.962 camu:CA2015_0980 RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Cyclobacterium.4654   camu.4556 camu:CA2015_4783 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     bbd.1448 bbd:Belba_1542 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Echinicola.714   evi.641 evi:Echvi_0603 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Echinicola.2641   evi.2774 evi:Echvi_2891 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Echinicola.714   est.1769 est:DN752_09370 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Echinicola.2641   est.3927 est:DN752_20825 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     alm.1764 alm:AO498_08835 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     dfe.52 dfe:Dfer_0599 RNA polymerase, sigma-24 subunit, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     dfe.862 dfe:Dfer_0747 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     dfe.52 dfe:Dfer_2806 RNA polymerase, sigma-24 subunit, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     dfe.3933 dfe:Dfer_4134 RNA polymerase, sigma-24 subunit, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.101   sli.1086 sli:Slin_1017 ECF subfamily RNA polymerase sigma-24 subunit
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.3170   sli.4745 sli:Slin_4887 ECF subfamily RNA polymerase sigma-24 subunit
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.3170   srd.173 srd:SD10_00720 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.11284   srd.2410 srd:SD10_13035 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.101   srd.3370 srd:SD10_18165 RNA polymerase sigma 70
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.101   smon.2397 smon:AWR27_12320 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.3170   smon.4420 smon:AWR27_23010 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.101   spir.692 spir:CWM47_01980 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Spirosoma.3170   spir.5142 spir:CWM47_26580 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     lby.412 lby:Lbys_0392 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Runella.2062   rsi.3380 rsi:Runsl_3477 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Runella.3522   rsi.5294 rsi:Runsl_5547 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Runella.2062   run.1654 run:DR864_08460 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Runella.3522   run.5020 run:DR864_25930 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     eol.182 eol:Emtol_0154 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     eol.2284 eol:Emtol_2359 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     eol.3437 eol:Emtol_3563 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     eol.3864 eol:Emtol_3995 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fibrella.2955   fae.701 fae:FAES_0658 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fibrella.421   fae.1570 fae:FAES_1538 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fibrella.5428   fae.5429 fae:FAES_pFAES01019 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fibrella.421   fib.307 fib:A6C57_01460 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fibrella.2955   fib.1229 fib:A6C57_06265 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fibrella.6358   fib.2337 fib:A6C57_12040 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     als.3066 als:DJ013_15975 sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     fli.3541 fli:Fleli_4031 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Hymenobacter.3069   hsw.3432 hsw:Hsw_3452 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Hymenobacter.3069 Hymenobacter_sp_.6328 hym.2384 hym:N008_12095 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Hymenobacter.3069 Hymenobacter_sp_.1604 hyd.2552 hyd:PK28_14925 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Hymenobacter.3069 Hymenobacter_sp_.1604 hye.286 hye:AM218_01520 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Hymenobacter.3069   hyg.1299 hyg:AUC43_06570 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Pontibacter.4849   pko.2638 pko:PKOR_14955 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Rufibacter.2939 Rufibacter_sp_.1181 ruf.1899 ruf:TH63_10875 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Rufibacter.2939 Rufibacter_sp_.1181 rud.67 rud:TH61_00280 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fluviicola.1238   fte.1078 fte:Fluta_1050 RNA polymerase, sigma-24 subunit, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fluviicola.3231   flu.2520 flu:CHH17_13055 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629 Fluviicola.1238   flu.3001 flu:CHH17_15625 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     oho.1484 oho:Oweho_1526 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     oho.1571 oho:Oweho_1620 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.586261 Bacteria.156362 Bacteroidetes.5629     oho.2280 oho:Oweho_2395 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily

( plain text of OC.586261 )

Refinement of cluster

OC depth

KOs in cluster

    K03088 (95) RNA polymerase sigma-70 factor, ECF subf...

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Distribution of taxonomic categories