ID or terms query

Gammaproteobacteria.132276 (79 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274     gqu.2944 gqu:AWC35_15355 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ype.772 ype:YPO0669 crgA; LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypk.3447 ypk:y3510 putative transcriptional regulator LYSR-type
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 yph.3430 yph:YPC_3905 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypa.2949 ypa:YPA_3122 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypn.523 ypn:YPN_0527 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypm.2698 ypm:YP_2984 lysR19; LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypp.441 ypp:YPDSF_0451 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypg.351 ypg:YpAngola_A0278 substrate-binding transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypz.615 ypz:YPZ3_0626 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypt.333 ypt:A1122_01720 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypd.572 ypd:YPD4_0580 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypx.571 ypx:YPD8_0580 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypw.256 ypw:CH59_1195 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypj.1221 ypj:CH55_2144 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypv.1979 ypv:BZ15_2906 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pestis.2213 ypl.1527 ypl:CH46_249 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 yps.3319 yps:YPTB3394 LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypo.2366 ypo:BZ17_3215 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypi.576 ypi:YpsIP31758_0579 substrate-binding transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypy.654 ypy:YPK_0660 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypb.3474 ypb:YPTS_3535 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypq.2155 ypq:DJ40_3031 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypu.1844 ypu:BZ21_2675 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypr.1843 ypr:BZ20_2730 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypc.2124 ypc:BZ23_2963 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_pseudotuberculosis.3027 ypf.1952 ypf:BZ19_2805 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yen.3375 yen:YE3659 crgA; LysR family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yep.3312 yep:YE105_C3357 LysR family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yey.2462 yey:Y11_24841 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yel.635 yel:LC20_00792 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yew.3333 yew:CH47_4141 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yet.1338 yet:CH48_2260 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yef.609 yef:FORC2_0594 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_enterocolitica.2395 yee.309 yee:YE5303_03021 crgA; LysR-family regulatory protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563   ysi.756 ysi:BF17_04170 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563   yal.1021 yal:AT01_1948 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563   yfr.1817 yfr:AW19_2661 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563   ykr.2262 ykr:CH54_3127 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563   yro.1121 yro:CH64_2035 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_ruckeri.422 yru.411 yru:BD65_1380 bacterial regulatory helix-turn-helix, lysR family protein
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563 Yersinia_ruckeri.422 yrb.1443 yrb:UGYR_07620 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563   yak.1197 yak:ACZ76_06195 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Yersinia.1563   yma.570 yma:DA391_02840 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764   spe.4190 spe:Spro_4262 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_plymuthica.3583 srr.4305 srr:SerAS9_4377 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_plymuthica.3583 srl.3985 srl:SOD_c40760 yafC; putative HTH-type transcriptional regulator YafC
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_plymuthica.3583 sry.4314 sry:M621_22235 LysR family transcripitonal regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_plymuthica.3583 sply.4308 sply:Q5A_022250 dmlR_27; HTH-type transcriptional regulator DmlR
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_sp_.8155 srs.4305 srs:SerAS12_4378 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_sp_.8155 sra.4305 sra:SerAS13_4378 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_marcescens.8450 smw.4154 smw:SMWW4_v1c41950 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_marcescens.6256 smar.3562 smar:SM39_3698 LysR-family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_marcescens.4810 smac.3460 smac:SMDB11_3503 LysR-family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764   slq.4180 slq:M495_21420 LysR family transcripitonal regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_sp_.14382 serf.1412 serf:L085_07065 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.6764 Serratia_sp_.20663 sers.4001 sers:SERRSCBI_20390 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.11084 Serratia_fonticola.3717 sfw.799 sfw:WN53_04175 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.11084 Serratia_fonticola.3717 sfg.5006 sfg:AV650_26310 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Serratia.14773 Serratia_sp_.9435 sera.80 sera:Ser39006_000275 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274     sfo.1402 sfo:Z042_08170 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_atrosepticum.2437 eca.348 eca:ECA0336 LysR-family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_atrosepticum.2437 patr.333 patr:EV46_01800 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_atrosepticum.2437 pato.342 pato:GZ59_03660 LysR-family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_carotovorum.4720 pct.324 pct:PC1_0321 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_carotovorum.2842 pcc.338 pcc:PCC21_003350 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_carotovorum.6907 pcv.331 pcv:BCS7_01695 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_parmentieri.2342 pwa.323 pwa:Pecwa_0329 transcriptional regulator, LysR family
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_parmentieri.2342 ppar.3221 ppar:A8F97_16730 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590 Pectobacterium_parmentieri.2342 pec.346 pec:W5S_0343 putative HTH-type transcriptional regulator yafC
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590   pws.1851 pws:A7983_09800 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Pectobacterium.1590   ppoa.3546 ppoa:BJK05_18400 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274     lbq.1252 lbq:CKQ53_06815 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Erwinia.4870   eta.444 eta:ETA_04380 LysR-family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Erwinia.4870   ebi.3844 ebi:EbC_38480 LysR-family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Erwinia.9746   ege.559 ege:EM595_0546 yafC; putative HTH-type transcriptional regulator YafC
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Erwinia.4870   epe.4074 epe:CI789_21780 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Tatumella.1677   tci.650 tci:A7K98_03320 LysR family transcriptional regulator
OC.209088 Bacteria.95998 Proteobacteria.172207 Gammaproteobacteria.132276 Gammaproteobacteria___Enterobacteria.35274 Tatumella.1677   tpty.605 tpty:NCTC11468_00621 dmlR_2; D-malate degradation protein R

( plain text of OC.209088 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.209088 (348) OC.209089 (421) OC.209090...209208 OC.209209 (80) OC.209210 (447) OC.209211 (19) OC.209212 (52) OC.209213 (2) OC.209214 (210) OC.209215 (34) OC.209216 (11) OC.209217 (22) OC.209218 (400) OC.209219 (56) OC.209220 (200) OC.209221 (4) OC.209222-209227 OC.209228 (1) OC.209229 (117) OC.209006-209087 OC.209230...209494