ID or terms query

Escherichia.14641 (61 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eco.2597 eco:b2869 ygeV; putative sigma(54)-dependent transcriptional regulator YgeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecj.2310 ecj:JW2837 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecd.2641 ecd:ECDH10B_3044 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ebw.2560 ebw:BWG_2595 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecok.2238 ecok:ECMDS42_2369 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ece.3519 ece:Z4208 ygeV; putative transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecs.3419 ecs:ECs3742 transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecf.3542 ecf:ECH74115_4159 sigma-54 dependent transcriptional regulator, Fis family
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 etw.3566 etw:ECSP_3839 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elx.3405 elx:CDCO157_3495 putative transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eoj.3580 eoj:ECO26_3958 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eoi.3262 eoi:ECO111_3607 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecoo.3503 ecoo:ECRM13514_3724 ygeV; putative sigma-54-dependent transcriptional regulator YgeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecoh.3403 ecoh:ECRM13516_3588 ygeV; putative sigma-54-dependent transcriptional regulator YgeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecg.2952 ecg:E2348C_3121 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eok.3321 eok:G2583_3523 ygeV; Putative transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elr.3219 elr:ECO55CA74_16790 putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eso.3991 eso:O3O_20525 putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 esm.1027 esm:O3M_05165 putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 esl.1015 esl:O3K_05120 putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elh.2984 elh:ETEC_3063 transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eun.2733 eun:UMNK88_3561 sigma-54-dependent transcriptional regulator YgeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecc.3344 ecc:c3447 ygeV; Hypothetical sigma-54-dependent transcriptional regulator ygeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecp.2805 ecp:ECP_2863 hypothetical sigma-54-dependent transcriptional regulator YgeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eci.3191 eci:UTI89_C3254 ygeV; hypothetical sigma-54-dependent transcriptional regulator ygeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecv.2900 ecv:APECO1_3657 ygeV; DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecx.2801 ecx:EcHS_A3029 sigma-54 dependent transcriptional regulator, Fis family
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecm.2896 ecm:EcSMS35_3002 sigma-54 dependent transcriptional regulator, Fis family
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecy.3113 ecy:ECSE_3133 putative transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecr.2804 ecr:ECIAI1_2989 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecq.2987 ecq:ECED1_3329 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eck.2959 eck:EC55989_3156 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ect.3019 ect:ECIAI39_3284 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eoc.3085 eoc:CE10_3308 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eum.3089 eum:ECUMN_3212 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecz.2905 ecz:ECS88_3148 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elo.3034 elo:EC042_3080 transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eln.2794 eln:NRG857_14080 putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ese.2659 ese:ECSF_2665 putative transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecl.825 ecl:EcolC_0839 PAS modulated sigma54 specific transcriptional regulator, Fis family
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5458 eko.854 eko:EKO11_0862 PAS modulated sigma54 specific transcriptional regulator, Fis family
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5458 ekf.1671 ekf:KO11_08420 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eab.2998 eab:ECABU_c31500 ygeV; hypothetical sigma-54-dependent transcriptional regulator YgeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 edh.809 edh:EcDH1_0823 PAS modulated sigma54 specific transcriptional regulator, Fis family
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 edj.2746 edj:ECDH1ME8569_2772 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eih.3108 eih:ECOK1_3255 sigma-54 dependent transcriptional regulator, Fis family
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ena.2924 ena:ECNA114_2910 ygeV; putative sigma-54-dependent transcriptional regulator protein
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elu.435 elu:UM146_02175 putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5458 elw.3069 elw:ECW_m3122 ygeV; predicted DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5458 ell.3025 ell:WFL_15245 ygeV; putative DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elc.3106 elc:i14_3166 ygeV; putative sigma-54-dependent transcriptional
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 eld.3106 eld:i02_3166 ygeV; putative sigma-54-dependent transcriptional
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elp.2818 elp:P12B_c2967 hypothetical protein
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 elf.3313 elf:LF82_3164 ygeV; Uncharacterized sigma-54-dependent transcriptional
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecoa.3545 ecoa:APECO78_18060 DNA-binding transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5458 ecol.2850 ecol:LY180_14765 Fis family transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecoi.2959 ecoi:ECOPMV1_03141 (S)-limonene 6-monooxygenase
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecoj.3102 ecoj:P423_15755 Fis family transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641 Escherichia_coli.5457 ecos.3013 ecos:EC958_3150 ygeV; putative sigma-54-dependent transcriptional regulator YgeV
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641   eal.2986 eal:EAKF1_ch3138 sigma-54 dependent transcriptional regulator
OC.12037 Bacteria.9878 Proteobacteria.342410 Gammaproteobacteria.56205 Gammaproteobacteria___Enterobacteria.11617 Escherichia.14641   ema.3723 ema:C1192_21280 sigma-54-dependent Fis family transcriptional regulator

( plain text of OC.12037 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.12033 (1) OC.12034 (2) OC.12035 (1) OC.12036 (1) OC.12037 (397) OC.12038 (4) OC.12039 (4) OC.12040 (5) OC.12041 (4) OC.12042 (2) OC.12043 (2) OC.12011-12032 OC.12044-12087