ID or terms query

Firmicutes.102116 (56 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24509 Clostridium.1901 Clostridium_acetobutylicum.1842 cac.2687 cac:CA_C2795 MoaA/NirJ family Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24509 Clostridium.1901 Clostridium_acetobutylicum.1842 cae.2796 cae:SMB_G2831 albA; MoaA/NirJ family Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24509 Clostridium.1901 Clostridium_acetobutylicum.1842 cay.2799 cay:CEA_G2803 MoaA/NirJ family Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.6668 Clostridium_beijerinckii.1099 cbe.1988 cbe:Cbei_2008 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.6668 Clostridium_beijerinckii.1099 cbz.1987 cbz:Cbs_2008 radical SAM domain-containing protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.6668 Clostridium_beijerinckii.1099 cbei.2031 cbei:LF65_02177 radical SAM protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.28825 Clostridium_kluyveri.2838 ckl.436 ckl:CKL_0376 Predicted Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.28825 Clostridium_kluyveri.2838 ckr.342 ckr:CKR_0326 hypothetical protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.6668   csr.4588 csr:Cspa_c47280 nirJ; putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24509 Clostridium.17248 Clostridium_pasteurianum.3226 cpas.631 cpas:Clopa_0539 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24509 Clostridium.17248 Clostridium_pasteurianum.3226 cpat.422 cpat:CLPA_c04440 mftC; putative mycofactocin radical SAM maturase MftC
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24509 Clostridium.17248 Clostridium_pasteurianum.3226 cpae.422 cpae:CPAST_c04440 mftC; putative mycofactocin radical SAM maturase MftC
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.6668   csq.2648 csq:CSCA_2640 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Clostridium.20558   cace.3240 cace:CACET_c33630 nirJ2; putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24512 Clostridium.6669   cck.336 cck:Ccar_01385 Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.6668   ctyk.2360 ctyk:CTK_C24960 radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24509 Clostridium.17248   ceu.1117 ceu:A7L45_05715 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Clostridium.20558   cfm.452 cfm:BJL90_02230 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24503 Clostridium.6668   cdrk.1248 cdrk:B9W14_06480 heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24510 Alkaliphilus.924   amt.231 amt:Amet_0051 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24507     swo.686 swo:Swol_0691 radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24511     slp.1370 slp:Slip_1423 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfitobacterium.1001 Desulfitobacterium_hafniense.2074 dsy.2213 dsy:DSY2221 hypothetical protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfitobacterium.1001 Desulfitobacterium_hafniense.2074 dhd.3269 dhd:Dhaf_3350 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfitobacterium.1001   ddh.2555 ddh:Desde_2796 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfitobacterium.1001   ddl.2104 ddl:Desdi_2314 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfitobacterium.1001   dmt.1746 dmt:DESME_09255 Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfotomaculum.484   drm.2031 drm:Dred_2159 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfotomaculum.484   dca.1464 dca:Desca_1540 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfotomaculum.484   dru.1565 dru:Desru_1625 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfotomaculum.484   dfg.1938 dfg:B0537_10740 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     dae.1216 dae:Dtox_1255 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     dku.1449 dku:Desku_1517 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     dgi.1871 dgi:Desgi_2071 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     pth.1016 pth:PTH_0976 predicted Fe-S oxidoreductases
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     dau.1244 dau:Daud_1343 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     tjr.1074 tjr:TherJR_1139 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24504     sgy.1331 sgy:Sgly_1408 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508 Desulfosporosinus.6622   dor.1283 dor:Desor_1313 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24504 Dehalobacter.625 Dehalobacter_sp_.165 ded.51 ded:DHBDCA_p1025 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24504 Dehalobacter.625 Dehalobacter_sp_.165 dec.115 dec:DCF50_p1081 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24504 Dehalobacter.625   drs.1756 drs:DEHRE_09595 Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24505     hmo.1794 hmo:HM1_1969 radical sam
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     cthm.1619 cthm:CFE_1685 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     chy.1198 chy:CHY_1211 radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     mta.1205 mta:Moth_1245 radical SAM family protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     adg.1117 adg:Adeg_1256 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.24508     tpz.1443 tpz:Tph_c15290 radical SAM domain-containing protein
OC.226712 Bacteria.346089 Firmicutes.102116 Firmicutes___Clostridia.173865     nth.1122 nth:Nther_1128 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Selenomonas.1229     ssg.1683 ssg:Selsp_1768 Radical SAM domain protein
OC.226712 Bacteria.346089 Firmicutes.102116 Selenomonas.1229     sri.2170 sri:SELR_22440 hypothetical protein
OC.226712 Bacteria.346089 Firmicutes.102116 Selenomonas.1229 Selenomonas_sp_.37   sele.1035 sele:ADJ74_05500 Fe-S oxidoreductase
OC.226712 Bacteria.346089 Firmicutes.102116 Selenomonas.1229 Selenomonas_sp_.37   selo.831 selo:AXE86_04365 radical SAM protein
OC.226712 Bacteria.346089 Firmicutes.102116 Selenomonas.1229 Selenomonas_sp_.37   selt.1923 selt:BCS37_10345 putative heme d1 biosynthesis radical SAM protein NirJ2
OC.226712 Bacteria.346089 Firmicutes.102116 Pelosinus.625     puf.2653 puf:UFO1_2676 4Fe4S-binding SPASM domain containing protein
OC.226712 Bacteria.346089 Firmicutes.102116 Pelosinus.625     pft.1858 pft:JBW_01904 4Fe4S-binding SPASM domain containing protein

( plain text of OC.226712 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.226710 (190) OC.226711 (2) OC.226712 (66) OC.226713 (1) OC.226714 (2) OC.226715 (4) OC.226716 (2) OC.226717-226761 OC.226762-226768 OC.226769 (1) OC.226770 (107) OC.226771 (2) OC.226527...226709 OC.226772...226923