ID or terms query

Gammaproteobacteria.144547 (69 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425 Yersinia_enterocolitica.2246 yen.314 yen:YE0316 DNA-binding protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425 Yersinia_enterocolitica.2246 yep.362 yep:YE105_C0345 putative DNA-binding protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425 Yersinia_enterocolitica.2246 yey.3468 yey:Y11_35561 RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425 Yersinia_enterocolitica.2246 yew.2299 yew:CH47_3157 RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425 Yersinia_enterocolitica.2246 yet.325 yet:CH48_1273 RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425 Yersinia_enterocolitica.2246 yef.3762 yef:FORC2_3761 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425 Yersinia_enterocolitica.2246 yee.2982 yee:YE5303_30711 putative DNA-binding protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Yersinia.1425   yma.3989 yma:DA391_21045 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Proteus.2646 Proteus_mirabilis.584 pmr.3570 pmr:PMI3708 ECF-family sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Proteus.2646 Proteus_mirabilis.584 pmib.162 pmib:BB2000_0155 ECF-family sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Proteus.2646 Proteus_mirabilis.584 pvl.512 pvl:AOB99_02805 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Proteus.2646   pvg.253 pvg:CRN77_01210 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Providencia.3118 Providencia_stuartii.464 psi.1455 psi:S70_07375 ECF family sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Providencia.3118 Providencia_stuartii.464 psx.854 psx:DR96_1782 RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Providencia.3118 Providencia_stuartii.464 psta.1984 psta:BGK56_10435 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Providencia.3118   prg.668 prg:RB151_006430 fecI; putative RNA polymerase sigma factor FecI; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Providencia.3118   pala.384 pala:CO695_01750 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608 Providencia.3118   phei.652 phei:NCTC12003_00646 fecI_1; Probable RNA polymerase sigma factor fecI; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Gammaproteobacteria___Enterobacteria.53608     mmk.3265 mmk:MU9_804 RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   pae.1305 pae:PA1300 ECF subfamily sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paev.385 paev:N297_1340 RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paei.386 paei:N296_1340 RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   pau.3784 pau:PA14_47400 putative sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   pap.4036 pap:PSPA7_4091 probable sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   pag.3824 pag:PLES_38821 probable sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paf.3594 paf:PAM18_3603 putative sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   pnc.2160 pnc:NCGM2_2186 RNA polymerase ECF-subfamily sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paeb.5114 paeb:NCGM1900_5273 RNA polymerase ECF-subfamily sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   pdk.3792 pdk:PADK2_19140 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   psg.3715 psg:G655_18665 putative DNA-binding protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   prp.1400 prp:M062_07070 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paep.3819 paep:PA1S_19405 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paer.4865 paer:PA1R_gp4907 sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paem.3837 paem:U769_19250 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   pael.3873 pael:T223_19855 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paes.4090 paes:SCV20265_4112 Sigma factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paeu.1396 paeu:BN889_01402 putative sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paeg.2955 paeg:AI22_15195 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paec.379 paec:M802_1337 RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_aeruginosa.348   paeo.384 paeo:M801_1339 RNA polymerase sigma factor, sigma-70 family protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     pmos.107 pmos:O165_000405 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_protegens.368   pfl.1335 pfl:PFL_1373 RNA polymerase sigma-70 factor, ECF family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_protegens.368   pprc.1395 pprc:PFLCHA0_c14090 RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_protegens.368   ppro.1433 ppro:PPC_1427 ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_fluorescens.28213   pfs.1366 pfs:PFLU_1407 putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_fluorescens.8806   pfc.1340 pfc:PflA506_1365 RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_fluorescens.21696   pfn.4558 pfn:HZ99_24765 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_fluorescens.2923   pfw.1347 pfw:PF1751_v1c13490 ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_fluorescens.2923   pff.260 pff:PFLUOLIPICF701315 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_fluorescens.31202   pfx.1223 pfx:A7318_06200 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     pfb.4458 pfb:VO64_4561 RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     ptv.1375 ptv:AA957_07085 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     pvr.1410 pvr:PverR02_07190 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     pazo.2671 pazo:AYR47_14275 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     poi.1308 poi:BOP93_06680 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     pen.3948 pen:PSEEN4331 putative sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_sp_.2903   pdr.1646 pdr:H681_08255 putative DNA-binding protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_sp_.34055   psk.1599 psk:U771_08170 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_chlororaphis.241   pch.1226 pch:EY04_06250 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_chlororaphis.241   pcz.4704 pcz:PCL1606_47200 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_chlororaphis.241   pcp.4312 pcp:JM49_23385 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     pfz.3174 pfz:AV641_16815 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     plq.3055 plq:AA042_16850 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     ppv.2462 ppv:NJ69_12980 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_sp_.17530   psem.1393 psem:TO66_06910 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_sp_.15258   psec.4204 psec:CCOS191_4236 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     ppsy.2662 ppsy:AOC04_14085 RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031 Pseudomonas_sp_.39968   psos.1411 psos:POS17_1393 ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.534730 Bacteria.98966 Proteobacteria.23588 Gammaproteobacteria.144547 Pseudomonas.11031     panr.1516 panr:A7J50_1537 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily

( plain text of OC.534730 )

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OC depth

KOs in cluster

    K03088 (69) RNA polymerase sigma-70 factor, ECF subf...

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