ID or terms query

Gammaproteobacteria.169010 (57 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_campestris.401 xcc.2685 xcc:XCC2756 hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_campestris.401 xcb.1329 xcb:XC_1357 conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_campestris.401 xca.1402 xca:xcc-b100_1405 Conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_campestris.401 xcp.3023 xcp:XCR_3121 conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_campestris.8590 xcv.3011 xcv:XCV3069 conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_axonopodis.6850 xax.2771 xax:XACM_2856 enzyme with a TIM-barrel fold; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xac.2862 xac:XAC2925 conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xci.3093 xci:XCAW_03203 TIM-barrel fold containing protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xct.2996 xct:J151_03110 putative enzyme with a TIM-barrel fold; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xcj.2977 xcj:J158_03089 pyridoxal phosphate enzyme, YggS family; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xcu.2973 xcu:J159_03085 pyridoxal phosphate enzyme, YggS family; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xcn.2992 xcn:J169_03108 pyridoxal phosphate enzyme, YggS family; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xcw.2979 xcw:J162_03089 pyridoxal phosphate enzyme, YggS family; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xcr.2975 xcr:J163_03085 pyridoxal phosphate enzyme, YggS family; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xcm.2975 xcm:J164_03085 pyridoxal phosphate enzyme, YggS family; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xcf.2988 xcf:J172_03101 pyridoxal phosphate enzyme, YggS family; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_citri.2028 xfu.1569 xfu:XFF4834R_chr17140 hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_axonopodis.2955 xao.2858 xao:XAC29_14875 hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_oryzae.453 xoo.1317 xoo:XOO1417 Predicted enzyme with a TIM-barrel fold; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_oryzae.453 xom.1288 xom:XOO1301 XOO1301; conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_oryzae.453 xop.1766 xop:PXO_01992 hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_oryzae.453 xoy.2974 xoy:AZ54_17395 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_oryzae.453 xor.1400 xor:XOC_1486 hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101 Xanthomonas_oryzae.453 xoz.2472 xoz:BE73_15975 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.8916   xal.2098 xal:XALC_2161 putative alanine racemase protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.8916   xsa.3567 xsa:SB85_19635 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.8916   xtn.2352 xtn:FD63_13275 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101   xfr.2176 xfr:BER92_13455 YggS family pyridoxal phosphate enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101   xga.2628 xga:BI317_14910 YggS family pyridoxal phosphate enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101   xve.1029 xve:BJD12_05505 YggS family pyridoxal phosphate enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101   xpe.362 xpe:BJD13_02015 YggS family pyridoxal phosphate enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101   xhr.323 xhr:XJ27_01605 YggS family pyridoxal phosphate enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101   xph.3616 xph:XppCFBP6546_21285 XppCFBP6546P_21285; YggS family pyridoxal phosphate enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Xanthomonas.3101   xva.2611 xva:C7V42_14930 YggS family pyridoxal phosphate-dependent enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288 Stenotrophomonas_maltophilia.3476 sml.1022 sml:Smlt1088 conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288 Stenotrophomonas_maltophilia.3476 smt.932 smt:Smal_0930 alanine racemase domain protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288 Stenotrophomonas_maltophilia.4419 buj.926 buj:BurJV3_0925 protein of unknown function UPF0001; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288 Stenotrophomonas_maltophilia.3476 smz.954 smz:SMD_1012 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.8884 Stenotrophomonas_sp_.6491 stek.2396 stek:AXG53_12460 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288   srh.1093 srh:BAY15_1086 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288 Stenotrophomonas_sp_.3417 slm.2682 slm:BIZ42_14000 YggS family pyridoxal phosphate enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288 Stenotrophomonas_sp_.11807 sten.965 sten:CCR98_05020 YggS family pyridoxal phosphate-dependent enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Stenotrophomonas.3288 Stenotrophomonas_sp_.8457 stem.969 stem:CLM74_05010 YggS family pyridoxal phosphate-dependent enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Pseudoxanthomonas.183 Pseudoxanthomonas_suwonensis.761 psu.2037 psu:Psesu_2064 alanine racemase domain protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Pseudoxanthomonas.183 Pseudoxanthomonas_suwonensis.761 psuw.441 psuw:WQ53_02330 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Pseudoxanthomonas.183   psd.2627 psd:DSC_13255 hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.3951 Lysobacter_antibioticus.500 lab.1545 lab:LA76x_1543 alanine racemase, N-terminal domain protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.3951 Lysobacter_antibioticus.500 laq.4826 laq:GLA29479_733 yggS; UPF0001 protein yggS; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.3951   lcp.1317 lcp:LC55x_1294 alanine racemase, N-terminal domain protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.3951   lgu.1211 lgu:LG3211_1210 alanine racemase, N-terminal domain protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.3951 Lysobacter_enzymogenes.2346 lez.1180 lez:GLE_1162 hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.3951 Lysobacter_enzymogenes.2346 lem.3721 lem:LEN_3750 conserved hypothetical protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.11494   lmb.819 lmb:C9I47_0813 pyridoxal phosphate biosynthesis protein; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Lysobacter.12738   lyt.623 lyt:DWG18_03115 YggS family pyridoxal phosphate-dependent enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Luteimonas.4779   lum.2567 lum:CNR27_13480 YggS family pyridoxal phosphate-dependent enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010 Luteimonas.296   lue.181 lue:DCD74_00820 YggS family pyridoxal phosphate-dependent enzyme; K06997 PLP dependent protein
OC.416376 Bacteria.153423 Proteobacteria.213684 Gammaproteobacteria.169010     dko.3292 dko:I596_706 Hypothetical protein; K06997 PLP dependent protein

( plain text of OC.416376 )

Refinement of cluster

OC depth

KOs in cluster

    K06997 (57) PLP dependent protein

> Pathway search
> BRITE search

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.416375 (27) OC.416376 (59) OC.416377 (11) OC.416378-416381 OC.416382 (1) OC.416383 (1) OC.416384 (1) OC.416385 (5) OC.416386 (1) OC.416387 (1) OC.416388 (1) OC.416389 (1) OC.416390 (28) OC.416391 (1) OC.416392 (350) OC.416393 (2) OC.416394 (1) OC.416395-416463 OC.416464 (160) OC.416465 (4) OC.416466 (1) OC.416467 (1) OC.416468 (1) OC.416469 (1) OC.416470 (1) OC.416471 (2) OC.416472 (3) OC.416373-416374 OC.416473-416506