ID or terms query


Gammaproteobacteria.152579 (22 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Gammaproteobacteria___Enterobacteria.94795 Serratia.14249 Serratia_plymuthica.6558 srl.3923 srl:SOD_c40130 nahR; HTH-type transcriptional activator NahR
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppu.2499 ppu:PP_2551 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppf.3118 ppf:Pput_3164 transcriptional regulator, LysR family
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppg.3334 ppg:PputGB1_3365 transcriptional regulator, LysR family
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.21009   ppw.2227 ppw:PputW619_2222 transcriptional regulator, LysR family
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppt.2054 ppt:PPS_2092 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppb.3020 ppb:PPUBIRD1_3126 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppi.362 ppi:YSA_00463 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppx.3338 ppx:T1E_3360 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppuh.2179 ppuh:B479_10910 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   pput.1964 pput:L483_10030 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppun.3318 ppun:PP4_33470 putative LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_putida.4304   ppud.2299 ppud:DW66_2354 transcriptional regulator LysR
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_monteilii.695   pmon.1674 pmon:X969_08785 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_monteilii.695   pmot.1608 pmot:X970_08445 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078     pmos.1254 pmos:O165_006835 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078     ppj.2748 ppj:RK21_02752 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078     pen.2160 pen:PSEEN2369 putative transcriptional regulator, LysR family
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_sp_.46479   psv.2175 psv:PVLB_10920 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078     psw.3505 psw:LK03_19180 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078     ppv.1097 ppv:NJ69_05750 LysR family transcriptional regulator
OC.257238 Bacteria.204573 Proteobacteria.15362 Gammaproteobacteria.152579 Pseudomonas.40078 Pseudomonas_sp_.14251   psec.3137 psec:CCOS191_3138 LysR family transcriptional regulator

( plain text of OC.257238 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.257180-257228 OC.257229 (3) OC.257230 (10) OC.257231 (1) OC.257232 (2) OC.257233 (1) OC.257234 (1) OC.257235 (1) OC.257236 (12) OC.257237 (1) OC.257238 (93) OC.257239 (25) OC.257240 (2) OC.257241 (8) OC.257159-257228 OC.257242-257305