ID or terms query

OC.257216 [Gammaproteobacteria] (22 sequences)

OC Root 2nd 3rd 4th 5th 6th 7th PC Gene/Definition
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Gammaproteobacteria___Enterobacteria.29063 Klebsiella.10335 Klebsiella_pneumoniae.11564 kpu.3826 kpu:KP1_4227 modulation protein d1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Gammaproteobacteria___Enterobacteria.29063 Klebsiella.10335 Klebsiella_pneumoniae.11564 kpp.1117 kpp:A79E_1134 transcriptional regulator, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Gammaproteobacteria___Enterobacteria.29063 Klebsiella.10335 Klebsiella_variicola.4676 kva.1093 kva:Kvar_1099 transcriptional regulator, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Gammaproteobacteria___Enterobacteria.29063 Citrobacter.19033   cro.1332 cro:ROD_13991 LysR-family transcriptional regulator
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Gammaproteobacteria___Enterobacteria.29063 Pluralibacter.7399   pge.2981 pge:LG71_16490 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282     pre.2604 pre:PCA10_25790 putative LysR family transcriptional regulator
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_putida.12855   ppu.3115 ppu:PP_3196 nodulation protein d1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_putida.12855   ppx.3773 ppx:T1E_3801 nodD1; nodulation protein d1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.175991 Pseudomonas.53972 Pseudomonas_fluorescens.1275   pfs.1888 pfs:PFLU_1947 nodD; nodulation protein D; K14657 LysR family transcriptional regulator, nod-box dependent transcriptional activator
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.175991 Pseudomonas.53972 Pseudomonas_fluorescens.1275   pfe.825 pfe:PSF113_0821 Nodulation protein D
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95130 Pseudomonas.67355     pazo.3855 pazo:AYR47_20540 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_brassicacearum.3173   pba.1267 pba:PSEBR_a2129 putative transcription factor, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_brassicacearum.7907   pbc.3303 pbc:CD58_17595 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_sp_.46257   psv.1946 psv:PVLB_09730 nodulation protein d1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282 Pseudomonas_sp_.34683   psk.2228 psk:U771_11410 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95127 Pseudomonas.27282     pkc.2428 pkc:PKB_2371 nodD1; Nodulation protein D 1
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.336129 Pseudoalteromonas.12946     pat.850 pat:Patl_0846 transcriptional regulator, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.336134 Pseudoalteromonas.12963     pat.867 pat:Patl_0866 transcriptional regulator, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95126 Alteromonas.9512     aaw.1706 aaw:AVL56_08825 nodulation protein NfeD
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95128 Marinomonas.2286     mme.450 mme:Marme_0428 transcriptional regulator, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.175991 Marinomonas.4125     mme.2992 mme:Marme_3101 transcriptional regulator, LysR family
OC.257216 Bacteria.204650 Proteobacteria.27096 Gammaproteobacteria.95128 Marinomonas.2286     mpc.2313 mpc:Mar181_2353 transcriptional regulator, LysR family

( plain text of OC.257216 [Gammaproteobacteria] ) ( previous ver. )

Refinement of cluster

OC depth

KOs in cluster

    K14657 (1) LysR family transcriptional regulator, n...

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Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.257180-257195 OC.257196 (20) OC.257197 (1) OC.257198 (10) OC.257199 (76) OC.257200 (428) OC.257201 (67) OC.257202-257211 OC.257212 (168) OC.257213 (159) OC.257214 (5) OC.257215 (1) OC.257216 (211) OC.257217 (2) OC.257218 (6) OC.257219 (22) OC.257220 (1) OC.257159-257195 OC.257221-257305