ID or terms query

OC.3040 (54 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.3040 Bacteria.6717 Proteobacteria.765039 Gammaproteobacteria.399896     acii.1112 acii:C4901_05640 hypothetical protein
OC.3040 Bacteria.7831 Proteobacteria.765087 Gammaproteobacteria.400050     acii.1310 acii:C4901_06990 hypothetical protein
OC.3040 Bacteria.6717 Proteobacteria.551539 Deltaproteobacteria.3372 Geobacter.7981 Geobacter_sulfurreducens.478 gsu.1453 gsu:GSU1529 sensor histidine kinase response regulator, PAS domain-containing
OC.3040 Bacteria.6717 Proteobacteria.551539 Deltaproteobacteria.3372 Geobacter.7981 Geobacter_sulfurreducens.478 gsk.1438 gsk:KN400_1554 sensor histidine kinase response regulator, PAS domain-containing
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352 Geobacter.12780   gur.2609 gur:Gura_2743 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272561 Deltaproteobacteria.3369 Pelobacter.6334   ppd.1403 ppd:Ppro_1428 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352 Pelobacter.5092   ppd.113 ppd:Ppro_2089 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272560 Deltaproteobacteria.3356 Pelobacter.7447   ppd.2575 ppd:Ppro_2709 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352 Pelobacter.5092   ppd.113 ppd:Ppro_3008 multi-sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dak.24 dak:DaAHT2_0414 multi-sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3363     dak.918 dak:DaAHT2_0929 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dak.24 dak:DaAHT2_2564 multi-sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dsf.10 dsf:UWK_00149 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dsf.8 dsf:UWK_00197 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dsf.9 dsf:UWK_00308 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dsf.8 dsf:UWK_00394 PAS domain S-box
OC.3040 Bacteria.7078 Proteobacteria.272564 Deltaproteobacteria.3364     dsf.40 dsf:UWK_00732 PAS domain S-box
OC.3040 Bacteria.8240 Proteobacteria.602728 Deltaproteobacteria.115227     dsf.868 dsf:UWK_00865 PAS domain S-box
OC.3040 Bacteria.7078 Proteobacteria.272564 Deltaproteobacteria.3364     dsf.40 dsf:UWK_00904 PAS domain S-box
OC.3040 Bacteria.7963 Proteobacteria.272674 Deltaproteobacteria.3366     dsf.1252 dsf:UWK_01292 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dsf.8 dsf:UWK_01370 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dsf.8 dsf:UWK_01550 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272562 Deltaproteobacteria.3370     dsf.2733 dsf:UWK_02869 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272569 Deltaproteobacteria.3361 Desulfococcus.2218   dml.1811 dml:Dmul_18290 putative two component system sensor histidine kinase, hybrid
OC.3040 Bacteria.6717 Proteobacteria.551536 Deltaproteobacteria.3358     dal.3353 dal:Dalk_3513 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3352     dat.665 dat:HRM2_05940 two-component hybrid sensor and response regulator histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.596564 Deltaproteobacteria.107162     dao.231 dao:Desac_0141 multi-sensor hybrid histidine kinase
OC.3040 Bacteria.6718 Proteobacteria.272567 Deltaproteobacteria.3355     dao.2385 dao:Desac_2583 signal transduction histidine kinase, nitrogen specific, NtrB
OC.3040 Bacteria.6717 Proteobacteria.272678 Deltaproteobacteria.3374     dao.2705 dao:Desac_2947 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272601 Deltaproteobacteria.3357     dti.107 dti:Desti_0537 PAS domain S-box
OC.3040 Bacteria.7879 Proteobacteria.284413 Deltaproteobacteria.55259     dti.221 dti:Desti_1459 signal transduction histidine kinase
OC.3040 Bacteria.7879 Proteobacteria.284413 Deltaproteobacteria.55259     dti.221 dti:Desti_1782 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272601 Deltaproteobacteria.3357     dti.107 dti:Desti_2024 PAS domain S-box
OC.3040 Bacteria.7879 Proteobacteria.284413 Deltaproteobacteria.55259     dti.221 dti:Desti_2059 signal transduction histidine kinase
OC.3040 Bacteria.7879 Proteobacteria.284413 Deltaproteobacteria.55259     dti.221 dti:Desti_3563 signal transduction histidine kinase
OC.3040 Bacteria.7879 Proteobacteria.284413 Deltaproteobacteria.55259     dti.221 dti:Desti_4854 signal transduction histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272563 Deltaproteobacteria.3353     dti.4410 dti:Desti_5047 PAS domain S-box
OC.3040 Bacteria.6717 Proteobacteria.272601 Deltaproteobacteria.3357     sfu.378 sfu:Sfum_0231 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Proteobacteria.272601 Deltaproteobacteria.3357     sfu.3330 sfu:Sfum_3519 putative PAS/PAC sensor protein
OC.3040 Bacteria.7333 Firmicutes.244602 Firmicutes___Clostridia.98482 Clostridium.11313   cno.1268 cno:NT01CX_1395 sensory box histidine kinase/response regulator
OC.3040 Bacteria.7333 Firmicutes.244602 Firmicutes___Clostridia.98482 Clostridium.11313 Clostridium_botulinum.10390 cbn.599 cbn:CbC4_0557 sensory box histidine kinase/response regulator
OC.3040 Bacteria.6717 Firmicutes.302909 Firmicutes___Clostridia.183926     swo.1978 swo:Swol_2106 Signal transduction histidine kinase nitrogen specific-like protein
OC.3040 Bacteria.6717 Verrucomicrobia.2474       ote.2434 ote:Oter_2471 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717 Verrucomicrobia.2474       obg.792 obg:Verru16b_00795 Blue-light-activated protein
OC.3040 Bacteria.6717 Verrucomicrobia.2474       obg.1128 obg:Verru16b_01154 Blue-light-activated protein
OC.3040 Bacteria.6717 Verrucomicrobia.2474       obg.2399 obg:Verru16b_02499 Blue-light-activated protein
OC.3040 Bacteria.6717 Verrucomicrobia.2474       vbh.636 vbh:CMV30_02780 hypothetical protein
OC.3040 Bacteria.6717 Planctomycetes.26973       fmr.1510 fmr:Fuma_01458 Blue-light-activated protein
OC.3040 Bacteria.6717 Chlorobi.10718       cts.2168 cts:Ctha_2235 PAS/PAC sensor hybrid histidine kinase
OC.3040 Bacteria.6717         caby.60 caby:Cabys_1752 PAS domain S-box-containing protein
OC.3040 Bacteria.6717         caby.2283 caby:Cabys_3123 PAS domain S-box-containing protein
OC.3040 Bacteria.6717         caby.60 caby:Cabys_847 PAS domain S-box-containing protein
OC.3040 Archaea.86470 Euryarchaeota.72608       mpi.172 mpi:Mpet_0061 multi-sensor hybrid histidine kinase
OC.3040 Archaea.87211 Euryarchaeota.73364       mpl.1392 mpl:Mpal_1518 PAS/PAC sensor hybrid histidine kinase

( plain text of OC.3040 ) ( previous ver. )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.3023 (9) OC.3024 (6) OC.3025 (5) OC.3026 (4) OC.3027-3028 OC.3029 (1) OC.3030-3033 OC.3034 (3) OC.3035 (1) OC.3036-3039 OC.3040 (54) OC.3041 (2) OC.3042 (9) OC.3043 (1) OC.3044 (1) OC.3045 (1)