ID or terms query

Bacillus.1488 (80 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsu.1273 bsu:BSU12560 xpf; positive control factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.13832 bsr.1310 bsr:I33_1413 positive control factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsl.266 bsl:A7A1_0265 Positive control factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsh.1272 bsh:BSU6051_12560 xpf; positive control factor Xpf; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsy.1269 bsy:I653_06420 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsut.1278 bsut:BSUB_01367 xpf; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsul.1278 bsul:BSUA_01367 xpf; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsus.1193 bsus:Q433_07160 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.14640 bss.1270 bss:BSUW23_06410 zpf; positive control sigma-like factor; PBSZ phage; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.15535 bst.1367 bst:GYO_1568 positive control factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bso.1389 bso:BSNT_07734 xpf; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.12303 bsn.2915 bsn:BSn5_14715 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsn.3625 bsn:BSn5_18265 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsq.1244 bsq:B657_12560 xpf; Putative RNA polymerase PBSX sigma factor-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsx.1239 bsx:C663_1290 xpf; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_subtilis.354 bsp.1299 bsp:U712_06535 Positive control factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_licheniformis.242 bli.3540 bli:BL03831 xpf; putative phage RNA polymerase sigma factor-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_licheniformis.242 bld.1217 bld:BLi01326 xpf; phage RNA polymerase sigma like factor Xpf; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   blh.1391 blh:BaLi_c14670 xpf; phage RNA polymerase sigma like factor Xpf; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bay.1175 bay:RBAM_012580 xpf; Xpf; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.14197 bay.2576 bay:RBAM_026660 putative sigma factor-like positive control protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.5647 baq.587 baq:BACAU_0586 xpf1; positive control sigma-like factor Xpf; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 baq.1214 baq:BACAU_1213 xpf3; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bya.1192 bya:BANAU_1192 xpf1; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.15032 bya.2159 bya:BANAU_2161 xpf3; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.15206 bya.2881 bya:BANAU_2883 xpf5; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.5646 bamp.1177 bamp:B938_05970 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bamp.1268 bamp:B938_06425 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 baml.1139 baml:BAM5036_1169 xpf; putative RNA polymerase PBSX sigma factor-like; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bama.1182 bama:RBAU_1213 xpf; putative RNA polymerase PBSX sigma factor-like; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bamn.1163 bamn:BASU_1192 xpf; putative RNA polymerase PBSX sigma factor-like; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bamb.2528 bamb:BAPNAU_2532 xpf1; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.5646 bamb.2585 bamb:BAPNAU_2589 xpf3; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bamt.1187 bamt:AJ82_07090 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.10625 bamy.1199 bamy:V529_12030 xpf; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.10997 bamy.2265 bamy:V529_22700 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.5646 bmp.1130 bmp:NG74_01222 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_velezensis.261 bmp.1188 bmp:NG74_01282 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.4349 bao.585 bao:BAMF_0573 xpf1; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.10930 bao.852 bao:BAMF_0840 RBAM_026680v2; Positive control factor Xpf; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.4623 bao.1352 bao:BAMF_1340 xpf3; putative RNA polymerase PBSX sigma factor-like; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.4623 baz.2145 baz:BAMTA208_10875 xpf3; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.4349 bql.615 bql:LL3_00611 xpf1; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.4623 bql.1350 bql:LL3_01352 xpf3; putative RNA polymerase PBSX sigma factor-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.4623 bxh.2200 bxh:BAXH7_02224 xpf; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.140 bqy.1272 bqy:MUS_1343 xpf; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.12893 bqy.2267 bqy:MUS_2436 xpf1; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.13321 bqy.3031 bqy:MUS_3246 xpf2; RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.10477 bami.1389 bami:KSO_007000 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.140 bami.2624 bami:KSO_013215 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.4349 bami.2726 bami:KSO_013725 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.140 bamc.1255 bamc:U471_12650 ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.8886 bamc.2756 bamc:U471_27740 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_amyloliquefaciens.140 bamf.1208 bamf:U722_06600 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_atrophaeus.3686 bae.779 bae:BATR1942_03930 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_atrophaeus.3686 batr.656 batr:TD68_03470 -
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   bvm.1158 bvm:B9C48_06350 Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_pumilus.1678 bpu.2748 bpu:BPUM_2772 Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_pumilus.5949 bpum.2738 bpum:BW16_15045 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_pumilus.1678 bpus.2794 bpus:UP12_14650 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.5543 bjs.1370 bjs:MY9_1373 positive control factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.24748 bacw.2668 bacw:QR42_14085 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.17003 bacp.42 bacp:SB24_00225 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.17415 bacp.689 bacp:SB24_03515 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.6901 bacb.1677 bacb:OY17_08910 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.6973 bacb.1769 bacb:OY17_09390 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.7472 bacb.2542 bacb:OY17_13320 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.7852 bacb.3203 bacb:OY17_16655 positive control sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.26052 bacy.1006 bacy:QF06_05280 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.12509 bacl.1279 bacl:BS34A_13900 xpf; positive control factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.5543 balm.1315 balm:BsLM_1324 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   bgy.1341 bgy:BGLY_1349 xpf; positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   bgi.105 bgi:BGM20_00575 Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   bxi.2473 bxi:BK049_13080 Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   balt.2831 balt:CFN77_14980 sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.19967 bacs.851 bacs:AUL54_04345 Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488 Bacillus_sp_.20246 bacs.1240 bacs:AUL54_06460 Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   bmur.1782 bmur:ABE28_009155 hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   bsaf.2965 bsaf:BSL056_15700 Fis family transcriptional regulator; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.1307471 Bacteria.235287 Firmicutes.62001 Firmicutes___Bacilli.22293 Bacillus.1488   bit.3186 bit:BIS30_17030 positive control sigma-like factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily

( plain text of OC.1307471 )

Refinement of cluster

OC depth

KOs in cluster

    K03088 (79) RNA polymerase sigma-70 factor, ECF subf...

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Organism selection


Distribution of taxonomic categories

sequence organism Bacillus KO