ID or terms query

Proteobacteria.4109 (65 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.3049 Bacteria.7400 Proteobacteria.4109 Gammaproteobacteria.198078 Pseudomonas.43700   pfv.1246 pfv:Psefu_1246 multi-sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Gammaproteobacteria.198078 Pseudomonas.43700   psp.1216 psp:PSPPH_1261 two-component sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Gammaproteobacteria.198078 Pseudomonas.43700   pci.3223 pci:PCH70_32590 sensory box histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Gammaproteobacteria.198078 Pseudomonas.43700   prh.1652 prh:LT40_09020 chemotaxis protein CheY
OC.3049 Bacteria.7400 Proteobacteria.4109 Gammaproteobacteria.198078 Pseudomonas.43700 Pseudomonas_sp_.26708 pses.4870 pses:PSCI_4947 two component sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Betaproteobacteria.161751 Burkholderia.76800 Burkholderia_sp_.53352 byi.7096 byi:BYI23_D014530 putative sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Betaproteobacteria.161396 Burkholderia.75474 Burkholderia_sp_.51679 buz.5431 buz:AYM40_29110 hybrid sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34537 Ensifer.5282 Ensifer_adhaerens.5149 ead.5053 ead:OV14_b1033 two component sensor kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Ensifer.7899 Ensifer_adhaerens.7839 eah.5506 eah:FA04_28575 hybrid sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Agrobacterium.23339   atu.4941 atu:Atu5509 two component sensor kinase/response regulator hybrid
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Agrobacterium.12119 Agrobacterium_sp_.9827 agr.5208 agr:AGROH133_15086 two component sensor kinase/response regulator hybrid
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_etli.7612 rec.2454 rec:RHECIAT_CH0002504 putative two-component sensor histidine kinase protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_etli.2422 rel.2400 rel:REMIM1_CH02423 sensor histidine kinase/response regulator hybrid protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_etli.2422 rep.2388 rep:IE4803_CH02455 sensor histidine kinase/response regulator hybrid protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_sp_.1116 rei.2468 rei:IE4771_CH02540 sensor histidine kinase/response regulator hybrid protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_leguminosarum.3606 rle.2744 rle:RL2731 putative two-component sensor histidine kinase transcriptional regulatory protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_leguminosarum.3606 rlt.2029 rlt:Rleg2_2043 PAS/PAC sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_leguminosarum.3606 rlg.2261 rlg:Rleg_2267 PAS/PAC sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_leguminosarum.3606 rlb.4295 rlb:RLEG3_21965 chemotaxis protein CheY
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_leguminosarum.3606 rlu.4226 rlu:RLEG12_21675 PAS sensor protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946   rpha.2449 rpha:AMC79_CH02535 sensor histidine kinase/response regulator hybrid protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.25742 Rhizobium_sp_.21303 rht.3230 rht:NT26_3252 Sensor protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Rhizobium.7946 Rhizobium_sp_.1116 rhk.2460 rhk:Kim5_CH02535 sensor histidine kinase/response regulator hybrid protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Neorhizobium.8396   neo.3874 neo:CYG48_20180 hybrid sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Neorhizobium.8413   neo.3891 neo:CYG48_20265 sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99882 Bradyrhizobium.5378   bja.7412 bja:blr7985 two-component hybrid sensor and regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99882 Bradyrhizobium.5378 Bradyrhizobium_japonicum.5235 bju.6295 bju:BJ6T_63580 two-component hybrid sensor and regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99882 Bradyrhizobium.5378 Bradyrhizobium_japonicum.5235 bjp.5892 bjp:RN69_30805 chemotaxis protein CheY
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Bradyrhizobium.15336 Bradyrhizobium_sp_.8700 brs.6394 brs:S23_64700 putative two-component sensor histidine kinase transcriptional regulatory protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99882 Bradyrhizobium.5378   bic.5632 bic:LMTR13_30130 sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Bradyrhizobium.15336 Bradyrhizobium_sp_.8700 brk.2110 brk:CWS35_10830 hybrid sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880     sno.2546 sno:Snov_2604 multi-sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Methylorubrum.5621 Methylorubrum_extorquens.5222 mch.297 mch:Mchl_0272 PAS/PAC sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Methylobacterium.8679 Methylobacterium_sp_.2769 met.1981 met:M446_2057 multi-sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Methylobacterium.8679   mno.2767 mno:Mnod_2588 PAS/PAC sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Methylobacterium.8679   maqu.490 maqu:Maq22A_1p31795 baeS; chemotaxis protein CheY
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Methylobacterium.8679   mee.1007 mee:DA075_04785 PAS domain S-box protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Methylobacterium.21766 Methylobacterium_sp_.15725 metd.4693 metd:C0214_25280 sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34579     rva.240 rva:Rvan_0143 PAS/PAC sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538     rva.1465 rva:Rvan_1512 PAS/PAC sensor hybrid histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538     aua.3457 aua:M673_17535 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Caulobacter.9404   cmb.3668 cmb:CSW64_18950 sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34639 Novosphingobium.15683   nre.5325 nre:BES08_28140 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.293373 Sphingopyxis.14435   sphk.2274 sphk:SKP52_11485 sensor/response regulator hybrid
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34639 Sphingomonas.33197   stax.3302 stax:MC45_18020 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34534 Sphingomonas.6745 Sphingomonas_sp_.3574 sphi.4110 sphi:TS85_23570 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34534 Sphingomonas.6745   ssan.1759 ssan:NX02_08730 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34536 Sphingomonas.32259   ssan.5297 ssan:NX02_28080 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34536 Sphingomonas.32434   ssan.5664 ssan:NX02_p0460 sensory box protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34639 Sphingomonas.28963   span.4127 span:AWL63_21570 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34551 Sphingomonas.26215   skr.3330 skr:BRX40_17355 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34536 Sphingomonas.26549   skr.4299 skr:BRX40_22455 hybrid sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34534 Sphingomonas.6745 Sphingomonas_sp_.3574 sphc.4195 sphc:CVN68_22085 hybrid sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Sphingobium.1774   sjp.3574 sjp:SJA_C2-00820 signal transduction histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Sphingobium.1774 Sphingobium_sp_.18835 syb.1443 syb:TZ53_07720 histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Sphingobium.4908 Sphingobium_sp_.2934 sphr.48 sphr:BSY17_3420 GAF domain protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.99880 Sphingobium.4908 Sphingobium_sp_.2934 sphr.48 sphr:BSY17_3701 GAF domain protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Sphingobium.1774   sinb.3418 sinb:SIDU_17720 histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Sphingobium.1774 Sphingobium_sp_.12267 spht.4421 spht:K426_22864 signal transduction histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34536 Sphingobium.18487   sclo.3389 sclo:SCLO_2001830 hybrid sensor histidine kinase/response regulator
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Azospirillum.7679   ali.3638 ali:AZOLI_p10942 Hybrid sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.183881 Azospirillum.9490 Azospirillum_brasilense.8341 abs.2890 abs:AZOBR_50030 putative sensor histidine kinase with two PAS and a response regulator receiver domains
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Azospirillum.7679   ati.2104 ati:AL072_10955 hypothetical protein
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.34538 Azospirillum.7679 Azospirillum_sp_.8330 azm.2685 azm:DM194_14045 Hybrid sensor histidine kinase
OC.3049 Bacteria.7400 Proteobacteria.4109 Alphaproteobacteria.185574 Azospirillum.12127 Azospirillum_sp_.9277 azm.3793 azm:DM194_20070 sensor protein

( plain text of OC.3049 )

Refinement of cluster

OC depth

Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.3046 (2) OC.3047 (4) OC.3048 (6) OC.3049 (103) OC.3050 (4) OC.3051 (10) OC.3052 (2) OC.3053 (1) OC.3054 (1) OC.3055-3070