ID or terms query

Proteobacteria.89017 (101 sequences)

OC Root 2nd 3rd 4th 5th 6th PC Gene/Definition
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.178982     mca.2662 mca:MCA2864 putative ribosomal protein S6 modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.178982 Methylomonas.675   mmt.2153 mmt:Metme_2266 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.178982 Methylomonas.675   mdn.3598 mdn:JT25_019340 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.178982 Methylomonas.675   mdh.1644 mdh:AYM39_08545 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.178982 Methylomonas.675   mko.1697 mko:MKLM6_1779 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.178982     mah.2319 mah:MEALZ_2426 Conserved protein (Orf5) involved in biosynthesis of tetrahydromethanopterin
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.178982     mpsy.614 mpsy:CEK71_02665 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.179373 Methylophaga.1602   mej.2323 mej:Q7A_45 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.179373 Methylophaga.1602   mec.844 mec:Q7C_1773 ribosomal protein S6 modification protein, putative
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.403835     blep.1490 blep:AL038_08770 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.179373 Nitrosococcus.1684   noc.257 noc:Noc_0259 SSU ribosomal protein S6P modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.179373 Nitrosococcus.1684   nhl.3514 nhl:Nhal_3877 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.179373 Nitrosococcus.1684   nwa.358 nwa:Nwat_0360 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.179373     ntt.1725 ntt:TAO_1754 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.462856     tsy.5494 tsy:THSYN_31775 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Gammaproteobacteria.449151     seds.335 seds:AAY24_01655 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Burkholderia.62948 Burkholderia_sp_.29881 bug.3928 bug:BC1001_3949 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Burkholderia.55617 Burkholderia_sp_.20545 bge.3185 bge:BC1002_3222 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Burkholderia.31028 Burkholderia_sp_.26010 bgf.5352 bgf:BC1003_5454 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Burkholderia.31028 Burkholderia_sp_.11841 byi.4246 byi:BYI23_B014450 rimK; alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Burkholderia.31028   buo.3073 buo:BRPE64_BCDS01580 rimK; alpha-L-glutamate ligase RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Burkholderia.31028 Burkholderia_sp_.11841 bue.3103 bue:BRPE67_BCDS01440 rimK; alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Burkholderia.70056 Burkholderia_sp_.45199 buq.3886 buq:AC233_22030 30S ribosomal protein S6
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.3402 Paraburkholderia_xenovorans.3202 bxe.6701 bxe:Bxe_B2434 orf5; SSU ribosomal protein S6P modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.3402 Paraburkholderia_xenovorans.3202 bxb.4076 bxb:DR64_4762 alpha-L-glutamate ligase, RimK family protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.10710   bph.5806 bph:Bphy_5945 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.16210   bph.6295 bph:Bphy_6485 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.30261   bpx.516 bpx:BUPH_00533 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.10710   bcai.1790 bcai:K788_0001557 Ribosomal protein S6 glutaminyl transferase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.16210   pspw.3784 pspw:BJG93_19400 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.16210   para.4570 para:BTO02_24120 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.3402   parb.5986 parb:CJU94_31190 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.10710   phs.4243 phs:C2L64_21810 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.16210   phs.7362 phs:C2L64_38290 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.10710   pter.5134 pter:C2L65_26160 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.16210   pter.6678 pter:C2L65_34285 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Paraburkholderia.45711   pgp.4151 pgp:CUJ91_21495 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Variovorax.6538 Variovorax_paradoxus.1917 vap.3046 vap:Vapar_3081 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Variovorax.6538 Variovorax_paradoxus.1917 vpd.3102 vpd:VAPA_1c31450 putative alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723     mpt.2618 mpt:Mpe_A2610 SSU ribosomal protein S6P modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723     lch.3081 lch:Lcho_3149 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Rubrivivax.5097   rge.3984 rge:RGE_40260 rimK; ribosomal protein S6 modification protein RimK
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723     aon.3619 aon:DEH84_18990 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59724     metr.2498 metr:BSY238_3291 alpha-L-glutamate ligase, RimK family protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59724     mfa.1504 mfa:Mfla_1657 SSU ribosomal protein S6P modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59724 Methylotenera.314   mmb.1326 mmb:Mmol_1343 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59724 Methylotenera.314   meh.1543 meh:M301_1553 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59724 Methylovorus.509   mei.1504 mei:Msip34_1501 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59724 Methylovorus.509   mep.1515 mep:MPQ_1564 rimK; alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59724 Methylopumilus.791   mbac.730 mbac:BN1209_0748 rimK; Alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Azoarcus.10828 Azoarcus_sp_.7619 aza.4749 aza:AZKH_p0272 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Thauera.930   thu.987 thu:AC731_004850 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Betaproteobacteria.59723 Thauera.930 Thauera_sp_.2755 thk.2485 thk:CCZ27_13245 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Mesorhizobium.6057   mci.4200 mci:Mesci_4261 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Mesorhizobium.6057 Mesorhizobium_sp_.9403 mesw.4566 mesw:A9K65_023625 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88233     pht.4484 pht:BLM14_23795 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Rhizobium.32263   rga.6184 rga:RGR602_PC01569 alpha-L-glutamate ligase RimK family protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88237     xau.1831 xau:Xaut_1789 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235     sno.789 sno:Snov_0749 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylorubrum.5099 Methylorubrum_extorquens.961 mex.1781 mex:Mext_1832 alpha-L-glutamate ligase, RimK family; K05844 ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylorubrum.5099 Methylorubrum_extorquens.961 mea.1672 mea:Mex_1p1764 tetrahydromethanopterin synthesis protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylorubrum.5099 Methylorubrum_extorquens.961 mdi.2276 mdi:METDI2516 Conserved protein (Orf5) involved in biosynthesis of tetrahydromethanopterin
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylorubrum.5099 Methylorubrum_extorquens.961 mch.2050 mch:Mchl_2167 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylorubrum.9977   mpo.1769 mpo:Mpop_1783 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylorubrum.5099   mza.3113 mza:B2G69_16820 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1566   mrd.603 mrd:Mrad2831_0531 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1565 Methylobacterium_sp_.6059 met.5323 met:M446_5781 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1565   mno.5318 mno:Mnod_6005 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1566   mor.712 mor:MOC_0686 Alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.16177 Methylobacterium_sp_.8628 meta.1715 meta:Y590_08775 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1565   maqu.4953 maqu:Maq22A_c16480 rimK; alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1566   mphy.79 mphy:MCBMB27_00108 tetrahydromethanopterin:alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1565   mee.1189 mee:DA075_05735 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1565 Methylobacterium_sp_.13299 metd.1942 metd:C0214_10530 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Methylobacterium.1566 Methylobacterium_sp_.21381 metx.5456 metx:A3862_28295 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88231     msl.2324 msl:Msil_2388 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88234 Hyphomicrobium.2105 Hyphomicrobium_denitrificans.357 hdn.1452 hdn:Hden_1476 alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88234 Hyphomicrobium.2105 Hyphomicrobium_denitrificans.357 hdt.1726 hdt:HYPDE_31263 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88234 Hyphomicrobium.2105   hmc.1660 hmc:HYPMC_1626 Conserved protein (Orf5) involved in biosynthesis of tetrahydromethanopterin
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88234 Hyphomicrobium.2105   hni.2485 hni:W911_13180 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88234 Filomicrobium.3480   fil.581 fil:BN1229_v1_0585 Alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88234 Filomicrobium.3480   fiy.587 fiy:BN1229_v1_0587 Alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88232 Methylocystis.847   msc.1365 msc:BN69_1354 Alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88232 Methylocystis.847   mbry.324 mbry:B1812_01095 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88230     mtw.2592 mtw:CQW49_13490 RimK family alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229     mcg.1739 mcg:GL4_1785 ribosomal protein S6 glutaminyl transferase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229     hdi.2318 hdi:HDIA_2313 lysX; Alpha-aminoadipate-LysW ligase LysX
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Granulobacter.2177   gbe.772 gbe:GbCGDNIH1_0772 Ribosomal protein S6 modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Granulobacter.2177   gbh.764 gbh:GbCGDNIH2_0772 Ribosomal protein S6 modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Granulobacter.2177   gbc.755 gbc:GbCGDNIH3_0772 Ribosomal protein S6 modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88229 Granulobacter.2177   gbs.755 gbs:GbCGDNIH4_0772 Ribosomal protein S6 modification protein
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403   ali.3440 ali:AZOLI_p10699 putative Alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88236 Azospirillum.2404   ali.3588 ali:AZOLI_p10888 putative Alpha-L-glutamate ligase, RimK family
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403 Azospirillum_brasilense.3063 abs.5415 abs:AZOBR_p270081 putative Alpha-L-glutamate ligase, RimK family (modular protein)
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403 Azospirillum_brasilense.3064 abq.4803 abq:ABAZ39_25475 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403 Azospirillum_brasilense.3063 abq.4804 abq:ABAZ39_25480 hypothetical protein; K05966 triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403 Azospirillum_brasilense.3063 abf.4324 abf:AMK58_22320 hypothetical protein; K05966 triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403 Azospirillum_brasilense.3064 abf.4325 abf:AMK58_22325 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403   ati.5016 ati:AL072_27015 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403 Azospirillum_sp_.10716 azt.314 azt:TSH58p_01210 alpha-L-glutamate ligase
OC.564778 Bacteria.576500 Proteobacteria.89017 Alphaproteobacteria.88235 Azospirillum.2403 Azospirillum_sp_.8812 azm.3248 azm:DM194_17145 RimK family alpha-L-glutamate ligase

( plain text of OC.564778 )

Refinement of cluster

OC depth

KOs in cluster

    K05966 (2) triphosphoribosyl-dephospho-CoA synthase...
    K05844 (1) ribosomal protein S6--L-glutamate ligase...

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Organism selection


Distribution of taxonomic categories


Neighbor clusters

OC.564773 (5) OC.564774 (2) OC.564775 (43) OC.564776 (4) OC.564777 (16) OC.564778 (101) OC.564779 (1) OC.564780 (2) OC.564781 (10) OC.564782 (16) OC.564716-564772 OC.564783...565075