ID or terms query

Thermotogae.879 (31 sequences)

OC Root 2nd 3rd 4th 5th PC Gene/Definition
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_maritima.633 tma.1581 tma:TM1598 RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_maritima.633 tmm.1602 tmm:Tmari_1606 RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_maritima.633 tmi.1207 tmi:THEMA_06260 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_maritima.633 tmw.1587 tmw:THMA_1638 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_maritima.633 tmq.1586 tmq:THMB_1638 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_maritima.633 tmx.1577 tmx:THMC_1638 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502   tpt.1178 tpt:Tpet_1194 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_sp_.4756 trq.1243 trq:TRQ2_1261 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502   tna.861 tna:CTN_0860 RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502   tnp.1182 tnp:Tnap_1209 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_sp_.131 thq.1243 thq:T2812B_06325 RNA polymerase, sigma-24 subunit, ECF subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_sp_.131 thz.1147 thz:CELL2_06285 RNA polymerase, sigma-24 subunit, ECF subfamily protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermotoga.1502 Thermotoga_sp_.3447 thr.1097 thr:TRQ7_05730 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Pseudothermotoga.800   tle.751 tle:Tlet_0757 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Pseudothermotoga.800   tta.885 tta:Theth_0918 RNA polymerase, sigma-24 subunit, RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Pseudothermotoga.800   phy.2016 phy:AJ81_10535 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermosipho.535   tme.760 tme:Tmel_0777 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermosipho.535   taf.34 taf:THA_1000 RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermosipho.535 Thermosipho_sp_.1530 thp.839 thp:BG95_04545 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Thermosipho.535 Thermosipho_sp_.1530 ther.868 ther:Y592_04615 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Fervidobacterium.1563   fno.695 fno:Fnod_0719 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Fervidobacterium.1563   fpe.876 fpe:Ferpe_0952 RNA polymerase, sigma-24 subunit, RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Fervidobacterium.1563   fia.845 fia:NA23_04690 RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879     pmo.1475 pmo:Pmob_1582 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Marinitoga.1329   mpz.629 mpz:Marpi_0640 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Marinitoga.1329   marn.620 marn:LN42_03650 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879     dtn.1410 dtn:DTL3_1479 ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Kosmotoga.729   kol.1979 kol:Kole_2150 RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Kosmotoga.729   kpf.1860 kpf:IX53_10265 RNA polymerase sigma 70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Mesotoga.1103   mpg.1241 mpg:Theba_1267 RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
OC.351989 Bacteria.84315 Thermotogae.879 Mesotoga.1103   minf.2318 minf:MESINF_2425 RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily

( plain text of OC.351989 )

Refinement of cluster

OC depth

KOs in cluster

    K03088 (31) RNA polymerase sigma-70 factor, ECF subf...

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