Sequence Similarity Search

BLAST Search

BLAST	FASTA	KEGG2

Enter query sequence:

Sequence data

>pmum:103339235 K00225 L-galactono-1,4-lactone dehydrogenase [EC:1.3.2.3] | (RefSeq) L-galactono-1,4-lactone dehydrogenase, mitochondrial (N)
atgctcagagctctcactctcagacgctcactccagtccctccaccacaaccacctcaag
ccgctcatttccaccgccatccccaaaaacccactgaacccattaagcccagcacgcgca
tgttccagtctttcatcgccatcagcatcttcatcagcctctgagctccgcaagtacttg
ggctacacagccctcgtcttgttctccgctgcagccacctactactccttccctttccct
gaaaacgccaagcacaaaaaagcccagattttccgctatgctcctctgcccgaggagctc
cacacagtctccaactggagcgggacccacgaggtccagacccgggttttccaccagcct
gagacccttgaggagctggaaaaggttgtcaaggatgcccatgagaagaaaacccggatt
cggcctgtcgggtccgggttgtccccgaatgggattggattgtccagggctggaatggtc
aatttggcgctgatggataaggttttggaggtggataaggagaagaagagggtgagagtg
caagctgggataagggtgcaggaattggtggatgggatcaaggaacatggccttactctg
cagaactttgcctccattagggagcagcagattggtggcattttgcaggttggtgcacat
ggtactggtgcaaaattgcctccgatggatgaacaggtgatcagtatgaagctggtcact
cctgctaagggaacaatagaaatctctaaagagaaagatccagagctgttttatttagcc
cggtgtggccttggtggccttggagtggttgctgaagtcaccatccagtgcgttgagaga
caggagcttgtagagcacacctctgtttcaaacatggaagagatcaagaaaaatcataag
aaattactatctgagaataaacatgtgaagtacctttatattccatatagcgacactgtt
gtggttgtgacgtgtaaccctgtatcaaaatggaaaggtcccccaaagttcaaacccaaa
tatggcagtgatgaagccatacagcacgttcgagatctctacaaggaatgcctccagaag
tgcagtgtagttccagttaagaatgacgtggacataaatgagctctcatttacagagttg
agagataaactgcttgccctagatcctctcgacaaagatcatgttgtaaaagttaatcaa
gctgaggctgaattctggaggaagtcagagggatacagagtgggatggagtgatgaaatt
ctgggctttgattgtggtggtcaacagtgggtttcagaaacttgttttccagttggaacc
ctttccaaaccaagcttgaaagaccttgaatacatagaagatgtaaagcagctcatagag
aagaacgaggtaccagcacctgctccaatagagcagcgctggacagcatgcactaaaagc
cccatgagtccagcttcaagtacaaaagacgatgatatattttcgtgggttggtataatc
atgtaccttcctacaacggatgcccgccaaagaaaggaaattacagaagagtttttccac
tacaggcgtctgacccaagtacagttgtgggataagtattccgcttatgaacactgggca
aagattgaggttccgaaggacaaagaagagcttgcctcgctccaggccaggctaagaaag
cgttttccagttgatgcatacaataaagcacgaaaggagttggacccgagcaggatcctt
tcaaataacaagctggaaaagctgttcccattatcggacaccatttga

Select program and database:

BLASTP (prot query vs prot db)
BLASTX (nucl query vs prot db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

Microbial Reference Genes

Ocean (OM-RGC) Human gut (IGC)

nr-aa (GenBank, UniProt, RefSeq and PDBSTR)
Swiss-Prot UniProt RefSeq
PDBSTR
UniRef50 UniRef90 UniRef100
Virus-Host DB

BLASTN (nucl query vs nucl db)
TBLASTN (prot query vs nucl db)

KEGG GENES

	Eukaryotes Prokaryotes Viruses
	Favorite organism code or category

KEGG MGENES

	Environmental Organismal
	Favorite samples

KEGG GENOME

	Favorite organism code or category

Microbial Reference Genes

	Ocean (OM-RGC) Human gut (IGC)
	Ocean (MATOU)

nr-nt (GenBank, EMBL and RefSeq)
     dbEST dbGSS HTGs dbSTS
     RefSeq
Ribosomal Databases
     SILVA (SSU, 16S/18S) SILVA (LSU, 23S/28S)
     PR2 (Protist Reference)
     RDP (Prokaryotic 16S) RDP (Fungal 28S)
EPD
Virus-Host DB Genes
     Genomes
Environmental Viral Genome

Scoring matrix:

(except for BLASTN)

Filter:

Output options:

Set the maximum number of database sequences to be reported:
Set the maximum number of alignments to be displayed:

Optional parameters: (see manual for details)

E-value threshold
Alignment view:	(except for BLASTX)
Additional options:	(delimited by whitespaces)

Feedback	KEGG	GenomeNet	Kyoto University Bioinformatics Center