Mus musculus

Scientific Name	Mus musculus [TAX:10090]
Lineage	cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
DBLINKS	KEGG GENOME: T01002

Known viruses (189)

Scientific Name	Abelson murine leukemia virus [TAX:11788]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus
RefSeq	NC_001499 Abelson murine leukemia virus, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 6257398
Authors	Goff SP, Gilboa E, Witte ON, Baltimore D
Title	Structure of the Abelson murine leukemia virus genome and the homologous cellular gene: studies with cloned viral DNA.
Journal	Cell. 1980 Dec;22(3):777-85.
Comment	Culture cell line: NIH/3T3 cells
DBLINKS	KEGG BRITE: NC_001499 ViralZone: genus, family

Scientific Name	AKR (endogenous) murine leukemia virus [TAX:11791]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus
GenBank	J01998 AKV murine leukemia virus, complete proviral genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 6319746
Authors	Herr W
Title	Nucleotide sequence of AKV murine leukemia virus.
Journal	J Virol. 1984 Feb;49(2):471-8.
Comment	Laboratory host: house mouse
DBLINKS	ViralZone: genus, family

Scientific Name	Alfuy virus [TAX:44017]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; Murray Valley encephalitis virus
GenBank	AY898809 Alfuy virus strain MRM3929, complete genome.
Evidence	Literature
Reference	PMID: 16432019
Authors	May FJ, Lobigs M, Lee E, Gendle DJ, Mackenzie JS, Broom AK, Conlan JV, Hall RA
Title	Biological, antigenic and phylogenetic characterization of the flavivirus Alfuy.
Journal	J Gen Virol. 2006 Feb;87(Pt 2):329-37.
DBLINKS	ViralZone: family, genus

Scientific Name	Alkhumra hemorrhagic fever virus [TAX:172148]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; Kyasanur Forest disease virus
GenBank	JN860200 Alkhumra hemorrhagic fever virus strain SCVHF001, complete genome.
DISEASE	H01560 Alkhumra hemorrhagic fever
Evidence	Literature
Reference	PMID: 11554750
Authors	Charrel RN, Zaki AM, Attoui H, Fakeeh M, Billoir F, Yousef AI, de Chesse R, De Micco P, Gould EA, de Lamballerie X
Title	Complete coding sequence of the Alkhurma virus, a tick-borne flavivirus causing severe hemorrhagic fever in humans in Saudi Arabia.
Journal	Biochem Biophys Res Commun. 2001 Sep 21;287(2):455-61.
Comment	Culture cell line: Vero cells Laboratory host: house mouse, sheep, Wistar rats
Evidence	Literature
Reference	PMID: 17370534
Authors	Charrel RN, Fagbo S, Moureau G, Alqahtani MH, Temmam S, de Lamballerie X
Title	Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks.
Journal	Emerg Infect Dis. 2007 Jan;13(1):153-5.
Comment	Culture cell line: Vero cells Laboratory host: house mouse, sheep, Wistar rats
Evidence	Literature
Reference	PMID: 28456648
Authors	Al-Tawfiq JA, Memish ZA
Title	Alkhurma hemorrhagic fever virus.
Journal	Microbes Infect. 2017 Jun;19(6):305-310.
Comment	Culture cell line: Vero cells Laboratory host: house mouse, sheep, Wistar rats
DBLINKS	KEGG GENOME: T40050 ViralZone: family, genus

Scientific Name	Amapari virus [TAX:2886894]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus; Serra do Navio mammarenavirus
RefSeq	NC_010247 Amapari virus segment S, complete sequence. NC_010251 Amapari virus segment L, complete sequence.
Evidence	Literature
Reference	PMID: 12504568
Authors	Archer AM, Rico-Hesse R
Title	High genetic divergence and recombination in Arenaviruses from the Americas.
Journal	Virology. 2002 Dec 20;304(2):274-81.
Comment	Culture cell line: Vero cells Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_010247 NC_010251 ViralZone: family, genus

Scientific Name	Anaconda paramyxovirus [TAX:1529450]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Ferlavirus; Reptilian ferlavirus
GenBank	KJ956407 Anaconda paramyxovirus isolate RF111111, complete genome.
Evidence	Literature
Reference	PMID: 25078906
Authors	Woo PC, Lau SK, Martelli P, Hui SW, Lau CC, Fan RY, Groff JM, Tam EW, Chan KH, Yuen KY
Title	Fatal systemic necrotizing infections associated with a novel paramyxovirus, anaconda paramyxovirus, in green anaconda juveniles.
Journal	J Clin Microbiol. 2014 Oct;52(10):3614-23.
Comment	Culture cell line: BHK21, HF, Calu-3, A549, Hep-2, Caco-2, HRT-18G, Huh-7, Hela, HEK, NT2, RD, SF268, His-1, MDCK, MDBK, RK13, 3T3, Dubca, LLC-MK2, Vero, VeroE6, CRFK, PK-15, RK3E, RMC,DF-1, C6/36 cells
DBLINKS	ViralZone: family, genus

Scientific Name	Anhembi virus [TAX:273355]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Anhembi orthobunyavirus
RefSeq	NC_043564 Anhembi virus strain SPAr2984 RNA-dependent RNA polymerase gene, complete cds. NC_043565 Anhembi virus strain SPAr2984 polyprotein gene, complete cds. NC_043566 Anhembi virus strain SPAr2984 nucleocapsid protein gene, complete cds.
Evidence	Literature
Reference	Lopes, O. D. S., Sacchetta, L. D. A., Fonseca, I. E., & Lacerda, J. P. (1975). Bertioga (Guama group) and Anhembi (Bunyamwera group), two new arboviruses isolated in São Paulo, Brazil. The American journal of tropical medicine and hygiene, 24(1), 131-134.
DBLINKS	KEGG BRITE: NC_043564 NC_043565 NC_043566 ViralZone: family, genus

Scientific Name	Anopheles B virus [TAX:35308]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Anopheles B orthobunyavirus
RefSeq	NC_038721 Anopheles B virus nucleocapsid protein gene, complete cds.
Evidence	Literature
Reference	PMID: 19439468
Authors	Mohamed M, McLees A, Elliott RM
Title	Viruses in the Anopheles A, Anopheles B, and Tete serogroups in the Orthobunyavirus genus (family Bunyaviridae) do not encode an NSs protein.
Journal	J Virol. 2009 Aug;83(15):7612-8.
Comment	Vector: mosquito
DBLINKS	KEGG BRITE: NC_038721 ViralZone: family, genus

Scientific Name	Artashat orthonairovirus [TAX:2170061]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Nairoviridae; Orthonairovirus
RefSeq	NC_043440 Artashat virus strain LEIV-10898Az segment L RNA-dependent RNA-polymerase gene, partial cds. NC_043441 Artashat virus strain LEIV-10898Az segment S nucleocapsid protein gene, partial cds. NC_043442 Artashat virus strain LEIV-10898Az segment M glycoprotein precursor, gene, partial cds.
Evidence	Literature
Reference	PMID: 25335415
Authors	Al'khovskiĭ SV, L'vov DK, Shchelkanov MIu, Shchetinin AM, Deriabin PG, Gitel'man AK, Botikov AG, Samokhvalov EI, Zakarian VA
Title	[Taxonomic status of the Artashat virus (ARTSV) (Bunyaviridae, Nairovirus) isolated from the ticks Ornithodoros alactagalis Issaakjan, 1936 and O. verrucosus Olenev, Sassuchin et Fenuk, 1934 (Argasidae Koch, 1844) collected in Transcaucasia].
Journal	Vopr Virusol. 2014 May-Jun;59(3):24-8.
Comment	Laboratory host: mouse Laboratory host: mouse
Evidence	Literature
Reference	PMID: 28983005
Authors	Alkhovsky SV, Lvov DK, Shchetinin AM, Deriabin PG, Shchelkanov MY, Aristova VA, Morozova TN, Gitelman AK, Palacios GF, Kuhn JH
Title	Complete Genome Coding Sequences of Artashat, Burana, Caspiy, Chim, Geran, Tamdy, and Uzun-Agach Viruses (<i>Bunyavirales</i>: <i>Nairoviridae</i>: <i>Orthonairovirus</i>).
Journal	Genome Announc. 2017 Oct 5;5(40).
Comment	Laboratory host: mouse Laboratory host: mouse
DBLINKS	KEGG BRITE: NC_043440 NC_043441 NC_043442 ICTV: 202005462 ViralZone: genus, family

Scientific Name	Baboon cytomegalovirus OCOM4-37 [TAX:153301]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Cytomegalovirus; Papiine betaherpesvirus 3
RefSeq	NC_055235 Baboon cytomegalovirus OCOM4-37, complete genome, * SEQUENCING IN PROGRESS *, 22 unordered pieces.
Evidence	Literature
Reference	PMID: 11699958
Authors	Blewett EL, White G, Saliki JT, Eberle R
Title	Isolation and characterization of an endogenous cytomegalovirus (BaCMV) from baboons.
Journal	Arch Virol. 2001;146(9):1723-38.
Comment	Laboratory host: house mouse Culture cell line: Human fibroblasts, HFF, MRC-5 cells
DBLINKS	KEGG BRITE: NC_055235 ViralZone: subfamily, genus, family

Scientific Name	Bagaza virus [TAX:64290]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_012534 Bagaza virus strain DakAr B209, complete genome.
Evidence	Literature
Reference	PMID: 9420202
Authors	Kuno G, Chang GJ, Tsuchiya KR, Karabatsos N, Cropp CB
Title	Phylogeny of the genus Flavivirus.
Journal	J Virol. 1998 Jan;72(1):73-83.
Comment	Vector: mosquitos Laboratory host: house mouse
Evidence	Literature
Reference	PMID: 17195954
Authors	Kuno G, Chang GJ
Title	Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses.
Journal	Arch Virol. 2007;152(4):687-96.
Comment	Vector: mosquitos Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_012534 KEGG GENOME: T40351 ICTV: 202003073 ViralZone: family, genus

Scientific Name	Bainyik virus [TAX:1534467]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; Kokobera virus
GenBank	KM225264 Bainyik virus strain MK7979, complete genome.
Evidence	Literature
Reference	PMID: 25237018
Authors	Warrilow D, Hall-Mendelin S, Hobson-Peters J, Prow NA, Allcock R, Hall RA
Title	Complete coding sequences of three members of the kokobera group of flaviviruses.
Journal	Genome Announc. 2014 Sep 18;2(5).
DBLINKS	ViralZone: family, genus

Scientific Name	Barmah Forest virus [TAX:11020]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq	NC_001786 Barmah Forest virus, complete genome.
Evidence	Literature
Reference	PMID: 9018152
Authors	Lee E, Stocks C, Lobigs P, Hislop A, Straub J, Marshall I, Weir R, Dalgarno L
Title	Nucleotide sequence of the Barmah Forest virus genome.
Journal	Virology. 1997 Jan 20;227(2):509-14.
Comment	Laboratory host: Mus musculus(mouse)
DBLINKS	KEGG BRITE: NC_001786 ICTV: 202005084 ViralZone: family, genus

Scientific Name	Batama virus [TAX:611709]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Batama orthobunyavirus
RefSeq	NC_038722 Batama virus isolate AnB1292 nucleocapsid protein gene, complete cds.
Evidence	Literature
Reference	PMID: 19439468
Authors	Mohamed M, McLees A, Elliott RM
Title	Viruses in the Anopheles A, Anopheles B, and Tete serogroups in the Orthobunyavirus genus (family Bunyaviridae) do not encode an NSs protein.
Journal	J Virol. 2009 Aug;83(15):7612-8.
DBLINKS	KEGG BRITE: NC_038722 ViralZone: family, genus

Scientific Name	Beatrice Hill virus [TAX:1819301]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Tibrovirus; Beatrice Hill tibrovirus
RefSeq	NC_039021 Beatrice Hill virus isolate CSIRO 25, complete genome.
Evidence	Literature
Reference	PMID: 28126935
Authors	Wiley MR, Prieto K, Blasdell KR, Caì Y, Campos Lawson C, Walker PJ, Chiu CY, Palacios G, Kuhn JH
Title	Beatrice Hill Virus Represents a Novel Species in the Genus Tibrovirus (Mononegavirales: Rhabdoviridae).
Journal	Genome Announc. 2017 Jan 26;5(4).
Comment	Laboratory host: Mus musculus
DBLINKS	KEGG BRITE: NC_039021 ViralZone: family, genus

Scientific Name	Bovine adeno-associated virus [TAX:256548]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Dependoparvovirus; Adeno-associated dependoparvovirus B
RefSeq	NC_005889 Bovine adeno-associated virus, complete genome.
Evidence	Literature
Reference	PMID: 15163744
Authors	Schmidt M, Katano H, Bossis I, Chiorini JA
Title	Cloning and characterization of a bovine adeno-associated virus.
Journal	J Virol. 2004 Jun;78(12):6509-16.
Comment	Culture cell line: 293T cells, HeLa cells, SkOV3 cells, SNB75 cells, MDBK cells Laboratory host: Mus musculus
DBLINKS	KEGG BRITE: NC_005889 ViralZone: genus, family

Scientific Name	Burana virus [TAX:1453404]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Nairoviridae; Orthonairovirus; Tamdy orthonairovirus
RefSeq	NC_043437 Burana virus strain 760 segment S nucleocapsid protein gene, partial cds. NC_043438 Burana virus strain 760 segment M glycoprotein precursor, gene, partial cds. NC_043439 Burana virus strain 760 segment L RNA-dependent RNA-polymerase gene, partial cds.
Evidence	Literature
Reference	PMID: 28983005
Authors	Alkhovsky SV, Lvov DK, Shchetinin AM, Deriabin PG, Shchelkanov MY, Aristova VA, Morozova TN, Gitelman AK, Palacios GF, Kuhn JH
Title	Complete Genome Coding Sequences of Artashat, Burana, Caspiy, Chim, Geran, Tamdy, and Uzun-Agach Viruses (<i>Bunyavirales</i>: <i>Nairoviridae</i>: <i>Orthonairovirus</i>).
Journal	Genome Announc. 2017 Oct 5;5(40).
Comment	Laboratory host: house mouse
Evidence	Other
Comment	Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_043437 NC_043438 NC_043439 ViralZone: genus, family

Scientific Name	Cachoeira Porteira virus [TAX:1138490]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Cachoeira Porteira orthobunyavirus
RefSeq	NC_043573 Cachoeira Porteira virus strain BeAr328208 polyprotein gene, complete cds. NC_043574 Cachoeira Porteira virus strain BeAr328208 nucleocapsid protein gene, complete cds. NC_043575 Cachoeira Porteira virus strain BeAr328208 RNA-dependent RNA polymerase gene, complete cds.
Evidence	Literature
Reference	PMID: 22278828
Authors	Chowdhary R, Street C, Travassos da Rosa A, Nunes MRT, Tee KK, Hutchison SK, Vasconcelos PFC, Tesh RB, Lipkin WI, Briese T
Title	Genetic characterization of the Wyeomyia group of orthobunyaviruses and their phylogenetic relationships.
Journal	J Gen Virol. 2012 May;93(Pt 5):1023-1034.
Comment	Laboratory host: Mouse
DBLINKS	KEGG BRITE: NC_043573 NC_043574 NC_043575 ViralZone: family, genus

Scientific Name	cardiovirus D1 [TAX:2779847]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B
GenBank	EF165067 Cardiovirus D1, complete genome.
Evidence	Literature
Reference	PMID: 17460053
Authors	Jones MS, Lukashov VV, Ganac RD, Schnurr DP
Title	Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with fever of unknown origin.
Journal	J Clin Microbiol. 2007 Jul;45(7):2144-50.
Comment	Culture cell line: WI-38, HFDL-645 cell, HFDK Laboratory host: Mus musculus
DBLINKS	ViralZone: genus, family

Scientific Name	Cas-Br-E murine leukemia virus [TAX:11792]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; unclassified Murine leukemia virus
GenBank	X57540 CAS-BR-E murine leukemia virus, viral genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 1840655
Authors	Perryman SM, McAtee FJ, Portis JL
Title	Complete nucleotide sequence of the neurotropic murine retrovirus CAS-BR-E.
Journal	Nucleic Acids Res. 1991 Apr 11;19(7):1707.
DBLINKS	ViralZone: genus, family

Scientific Name	Catu virus [TAX:1678225]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Catu orthobunyavirus
RefSeq	NC_038726 Catu virus strain BeH 151 nucleocapsid protein gene, complete cds. NC_038727 Catu virus strain BeH 151 polyprotein gene, complete cds. NC_038728 Catu virus strain BeH 151 RNA-dependent RNA polymerase gene, complete cds.
Evidence	Literature
Reference	PMID: 26610546
Authors	Shchetinin AM, Lvov DK, Deriabin PG, Botikov AG, Gitelman AK, Kuhn JH, Alkhovsky SV
Title	Genetic and Phylogenetic Characterization of Tataguine and Witwatersrand Viruses and Other Orthobunyaviruses of the Anopheles A, Capim, Guamá, Koongol, Mapputta, Tete, and Turlock Serogroups.
Journal	Viruses. 2015 Nov 23;7(11):5987-6008.
DBLINKS	KEGG BRITE: NC_038726 NC_038727 NC_038728 ViralZone: family, genus

Scientific Name	Chim orthonairovirus [TAX:2170062]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Nairoviridae; Orthonairovirus
RefSeq	NC_043434 Chim virus strain LEIV-858Uz segment L RNA-dependent RNA-polymerase gene, partial cds. NC_043435 Chim virus strain LEIV-858Uz segment S nucleocapsid protein gene, partial cds. NC_043436 Chim virus strain LEIV-858Uz segment M glycoprotein precursor, gene, partial cds.
Evidence	Literature
Reference	PMID: 28983005
Authors	Alkhovsky SV, Lvov DK, Shchetinin AM, Deriabin PG, Shchelkanov MY, Aristova VA, Morozova TN, Gitelman AK, Palacios GF, Kuhn JH
Title	Complete Genome Coding Sequences of Artashat, Burana, Caspiy, Chim, Geran, Tamdy, and Uzun-Agach Viruses (<i>Bunyavirales</i>: <i>Nairoviridae</i>: <i>Orthonairovirus</i>).
Journal	Genome Announc. 2017 Oct 5;5(40).
Comment	culture cell line: suckling mouse brain tissue Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_043434 NC_043435 NC_043436 ICTV: 202005463 ViralZone: genus, family

Scientific Name	Cotia virus [TAX:39444]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Oryzopoxvirus
GenBank	KM595078 Cotia virus strain SPAn880, complete genome.
Evidence	Literature
Reference	PMID: 25477400
Authors	Ibrahim MS, Antwerpen M, Georgi E, Vette P, Zoeller G, Meyer H
Title	Complete Genome Sequence of the Embu Virus Strain SPAn880.
Journal	Genome Announc. 2014 Dec 4;2(6).
DBLINKS	ICTV: 202007152 ViralZone: subfamily, family

Scientific Name	Cotia virus SPAn232 [TAX:930275]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Oryzopoxvirus; Cotia virus
RefSeq	NC_016924 Cotia virus SPAn232, complete genome.
Evidence	Literature
Reference	PMID: 22345477
Authors	Afonso PP, Silva PM, Schnellrath LC, Jesus DM, Hu J, Yang Y, Renne R, Attias M, Condit RC, Moussatché N, Damaso CR
Title	Biological characterization and next-generation genome sequencing of the unclassified Cotia virus SPAn232 (Poxviridae).
Journal	J Virol. 2012 May;86(9):5039-54.
DBLINKS	KEGG BRITE: NC_016924 ViralZone: subfamily, family

Scientific Name	Cowpox virus [TAX:10243]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus
RefSeq	NC_003663 Cowpox virus, complete genome.
DISEASE	H02351 Cowpox
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003663 KEGG GENOME: T40359 ICTV: 202004769 ViralZone: subfamily, genus, family

Scientific Name	Deer tick virus [TAX:58535]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; Powassan virus
GenBank	AF311056 Deer tick virus strain ctb30 polyprotein gene, complete cds.
Evidence	Literature
Reference	PMID: 24016533
Authors	Dupuis AP 2nd, Peters RJ, Prusinski MA, Falco RC, Ostfeld RS, Kramer LD
Title	Isolation of deer tick virus (Powassan virus, lineage II) from Ixodes scapularis and detection of antibody in vertebrate hosts sampled in the Hudson Valley, New York State.
Journal	Parasit Vectors. 2013 Jul 15;6:185.
Comment	Laboratory host: house mouse
Evidence	Literature
Reference	PMID: 11716135
Authors	Kuno G, Artsob H, Karabatsos N, Tsuchiya KR, Chang GJ
Title	Genomic sequencing of deer tick virus and phylogeny of powassan-related viruses of North America.
Journal	Am J Trop Med Hyg. 2001 Nov;65(5):671-6.
Comment	Laboratory host: house mouse
DBLINKS	ViralZone: family, genus

Scientific Name	Deltapapillomavirus 2 [TAX:10564]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Deltapapillomavirus
RefSeq	NC_001523 Deer papillomavirus, complete genome.
Evidence	Literature
Reference	PMID: 2993669
Authors	Groff DE, Lancaster WD
Title	Molecular cloning and nucleotide sequence of deer papillomavirus.
Journal	J Virol. 1985 Oct;56(1):85-91.
Comment	Culture cell line: NIH 3T3 cells
DBLINKS	KEGG BRITE: NC_001523 ICTV: 202004001 ViralZone: family, genus

Scientific Name	Ecotropic murine leukemia virus [TAX:1511762]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; unclassified Murine leukemia virus
GenBank	KJ668270 Ecotropic murine leukemia virus, complete genome.
Evidence	Literature
Reference	PMID: 24912157
Authors	Triviai I, Ziegler M, Bergholz U, Oler AJ, Stübig T, Prassolov V, Fehse B, Kozak CA, Kröger N, Stocking C
Title	Endogenous retrovirus induces leukemia in a xenograft mouse model for primary myelofibrosis.
Journal	Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8595-600.
Comment	isolation_source="NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ (NSG) mice"
DBLINKS	ViralZone: genus, family

Scientific Name	Ectromelia virus [TAX:12643]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus
RefSeq	NC_004105 Ectromelia virus, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 25462348
Authors	Mehta N, Taylor J, Quilty D, Barry M
Title	Ectromelia virus encodes an anti-apoptotic protein that regulates cell death.
Journal	Virology. 2015 Jan 15;475:74-87.
DBLINKS	KEGG BRITE: NC_004105 ICTV: 202004770 ViralZone: subfamily, genus, family

Scientific Name	Ectromelia virus Naval [TAX:1651168]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Ectromelia virus
GenBank	KJ563295 Ectromelia virus Naval, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: subfamily, genus, family

Scientific Name	enterovirus D94 [TAX:2015550]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Enterovirus; Enterovirus D
GenBank	EF107097 Human enterovirus 94 isolate 19/04 from Democratic Republic of the Congo, complete genome.
Evidence	Literature
Reference	PMID: 17325357
Authors	Smura TP, Junttila N, Blomqvist S, Norder H, Kaijalainen S, Paananen A, Magnius LO, Hovi T, Roivainen M
Title	Enterovirus 94, a proposed new serotype in human enterovirus species D.
Journal	J Gen Virol. 2007 Mar;88(Pt 3):849-58.
Comment	Culture cell line: RD cells, GMK cells, Vero cells, L20B cells, BYHK21 cells, RK13 cells, MDBK cells, MDCK cells
DBLINKS	ViralZone: genus, family

Scientific Name	Farmington virus [TAX:1027468]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; unclassified Rhabdoviridae
RefSeq	NC_025253 Farmington virus strain CT 114, complete genome.
Evidence	Literature
Reference	PMID: 23816310
Authors	Palacios G, Forrester NL, Savji N, Travassos da Rosa AP, Guzman H, Detoy K, Popov VL, Walker PJ, Lipkin WI, Vasilakis N, Tesh RB
Title	Characterization of Farmington virus, a novel virus from birds that is distantly related to members of the family Rhabdoviridae.
Journal	Virol J. 2013 Jul 1;10:219.
Comment	Laboratory host: Mus musculus
DBLINKS	KEGG BRITE: NC_025253 ViralZone: family

Scientific Name	Finkel-Biskis-Jinkins murine sarcoma virus [TAX:353765]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus
RefSeq	NC_038858 FBR murine osteosarcoma, complete proviral sequence integrated in Rattus norvegicus genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_038858 ICTV: 202005009 ViralZone: genus, family

Scientific Name	Friend murine leukemia virus [TAX:11795]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus
RefSeq	NC_001362 Friend murine leukemia virus FB29 complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001362 ViralZone: genus, family

Scientific Name	Friend spleen focus-forming virus [TAX:11820]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus; Spleen focus-forming virus
GenBank	V01552 Friend spleen focus-forming virus genome contains the reading frame of gp52.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 6308646
Authors	Wolff L, Scolnick E, Ruscetti S
Title	Envelope gene of the Friend spleen focus-forming virus: deletion and insertions in 3' gp70/p15E-encoding region have resulted in unique features in the primary structure of its protein product.
Journal	Proc Natl Acad Sci U S A. 1983 Aug;80(15):4718-22.
Comment	Laboratory host: Mus musculus
DBLINKS	ViralZone: genus, family

Scientific Name	Getah virus [TAX:59300]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq	NC_006558 Getah virus, complete genome.
Evidence	Literature
Reference	PMID: 1338481
Authors	Li XD, Qiu FX, Yang H, Rao YN, Calisher CH
Title	Isolation of Getah virus from mosquitos collected on Hainan Island, China, and results of a serosurvey.
Journal	Southeast Asian J Trop Med Public Health. 1992 Dec;23(4):730-4.
DBLINKS	KEGG BRITE: NC_006558 ICTV: 202005092 ViralZone: family, genus

Scientific Name	Guajara orthobunyavirus [TAX:1933272]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus
RefSeq	NC_038732 Guajara virus strain BeAn 10615 nucleocapsid protein gene, complete cds. NC_038733 Guajara virus strain BeAn 10615 polyprotein gene, complete cds. NC_038734 Guajara virus strain BeAn 10615 RNA-dependent RNA polymerase gene, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_038732 NC_038733 NC_038734 ICTV: 202000109 ViralZone: family, genus

Scientific Name	Guertu virus [TAX:1763596]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Bandavirus; Guertu bandavirus
RefSeq	NC_043609 Guertu virus strain DXM segment M, complete sequence. NC_043610 Guertu virus strain DXM segment S, complete sequence. NC_043611 Guertu virus strain DXM segment L, complete sequence.
Evidence	Literature
Reference	PMID: 29802259
Authors	Shen S, Duan X, Wang B, Zhu L, Zhang Y, Zhang J, Wang J, Luo T, Kou C, Liu D, Lv C, Zhang L, Chang C, Su Z, Tang S, Qiao J, Moming A, Wang C, Abudurexiti A, Wang H, Hu Z, Zhang Y, Sun S, Deng F
Title	A novel tick-borne phlebovirus, closely related to severe fever with thrombocytopenia syndrome virus and Heartland virus, is a potential pathogen.
Journal	Emerg Microbes Infect. 2018 May 25;7(1):95.
Comment	Culture cell line :Vero , DH82 , BHK-21 , 293 , and Hep G2
DBLINKS	KEGG BRITE: NC_043609 NC_043610 NC_043611 ViralZone: family

Scientific Name	Harvey murine sarcoma virus [TAX:11807]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus
RefSeq	NC_038668 harvey murine sarcoma virus p21 v-has protein gene.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_038668 ICTV: 202005014 ViralZone: genus, family

Scientific Name	Iaco virus [TAX:273356]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Iaco orthobunyavirus
RefSeq	NC_043567 Iaco virus strain BeAn314206 polyprotein gene, complete cds. NC_043568 Iaco virus strain BeAn314206 RNA-dependent RNA polymerase gene, complete cds. NC_043569 Iaco virus strain BeAn314206 nucleocapsid protein gene, complete cds.
Evidence	Literature
Reference	PMID: 22278828
Authors	Chowdhary R, Street C, Travassos da Rosa A, Nunes MRT, Tee KK, Hutchison SK, Vasconcelos PFC, Tesh RB, Lipkin WI, Briese T
Title	Genetic characterization of the Wyeomyia group of orthobunyaviruses and their phylogenetic relationships.
Journal	J Gen Virol. 2012 May;93(Pt 5):1023-1034.
Comment	Laboratory host: mouse
DBLINKS	KEGG BRITE: NC_043567 NC_043568 NC_043569 ViralZone: family, genus

Scientific Name	Igbo Ora virus [TAX:79899]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Onyong-nyong virus
GenBank	AF079457 Igbo Ora virus strain IBH10964, complete genome.
Evidence	Literature
Reference	PMID: 9875334
Authors	Lanciotti RS, Ludwig ML, Rwaguma EB, Lutwama JJ, Kram TM, Karabatsos N, Cropp BC, Miller BR
Title	Emergence of epidemic O'nyong-nyong fever in Uganda after a 35-year absence: genetic characterization of the virus.
Journal	Virology. 1998 Dec 5;252(1):258-68.
Comment	Laboratory host: house mouse
DBLINKS	ViralZone: family, genus

Scientific Name	Influenza B virus (B/Memphis/12/97-MA) [TAX:228675]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Betainfluenzavirus; Influenza B virus
GenBank	AY260949 Influenza B virus (B/Memphis/12/97-MA) segment 1, complete sequence. AY260950 Influenza B virus (B/Memphis/12/97-MA) segment 2, complete sequence. AY260951 Influenza B virus (B/Memphis/12/97-MA) segment 3, complete sequence. AY260952 Influenza B virus (B/Memphis/12/97-MA) segment 4, complete sequence. AY260953 Influenza B virus (B/Memphis/12/97-MA) segment 5, complete sequence. AY260954 Influenza B virus (B/Memphis/12/97-MA) segment 6, complete sequence. AY260955 Influenza B virus (B/Memphis/12/97-MA) segment 7, complete sequence. AY260956 Influenza B virus (B/Memphis/12/97-MA) segment 8, complete sequence.
Evidence	Literature
Reference	PMID: 15892972
Authors	McCullers JA, Hoffmann E, Huber VC, Nickerson AD
Title	A single amino acid change in the C-terminal domain of the matrix protein M1 of influenza B virus confers mouse adaptation and virulence.
Journal	Virology. 2005 Jun 5;336(2):318-26.
DBLINKS	ViralZone: genus

Scientific Name	Iriri virus [TAX:1620893]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Curiovirus; Iriri curiovirus
RefSeq	NC_034544 Iriri virus nucleoprotein, phosphoprotein, matrix, hypothetical proteins, glycoprotein, hypothetical proteins, and polymerase genes, complete cds.
Evidence	Literature
Reference	PMID: 25679389
Authors	Walker PJ, Firth C, Widen SG, Blasdell KR, Guzman H, Wood TG, Paradkar PN, Holmes EC, Tesh RB, Vasilakis N
Title	Evolution of genome size and complexity in the rhabdoviridae.
Journal	PLoS Pathog. 2015 Feb;11(2):e1004664.
DBLINKS	KEGG BRITE: NC_034544 ViralZone: family, genus

Scientific Name	Itacaiunas virus [TAX:490111]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Curiovirus; Itacaiunas curiovirus
RefSeq	NC_034536 Itacaiunas virus nucleoprotein, phosphoprotein, matrix, hypothetical protein, glycoprotein, hypothetical protein, and polymerase genes, complete cds.
Evidence	Literature
Reference	PMID: 16835701
Authors	Diniz JA, Nunes MR, Travassos da Rosa AP, Cruz AC, de Souza W, Medeiros DB, Chiang JO, Vasconcelos PF
Title	Characterization of two new rhabdoviruses isolated from midges (Culicoides SPP) in the Brazilian Amazon: proposed members of a new genus, Bracorhabdovirus.
Journal	Arch Virol. 2006 Dec;151(12):2519-27.
Comment	Culture cell line: C6/36 cells Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_034536 ViralZone: family, genus

Scientific Name	Itaporanga virus [TAX:629735]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Itaporanga phlebovirus
RefSeq	NC_055321 Itaporanga virus isolate original segment L, complete sequence. NC_055322 Itaporanga virus isolate original segment S, complete sequence. NC_055323 Itaporanga virus isolate original segment M, complete sequence.
Evidence	Literature
Reference	PMID: 31802735
Authors	Hughes HR, Russell BJ, Lambert AJ
Title	Genetic Characterization of Frijoles and Chilibre Species Complex Viruses (Genus <i>Phlebovirus</i>; Family <i>Phenuiviridae</i>) and Three Unclassified New World Phleboviruses.
Journal	Am J Trop Med Hyg. 2020 Feb;102(2):359-365.
DBLINKS	KEGG BRITE: NC_055321 NC_055322 NC_055323 ViralZone: family, genus

Scientific Name	J-virus [TAX:322067]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Jeilongvirus; Jun jeilongvirus
RefSeq	NC_007454 J-virus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_007454 ViralZone: family

Scientific Name	Karshi virus [TAX:64287]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; Royal Farm virus
GenBank	AY863002 Karshi virus strain LEIV 2247, complete genome.
Evidence	Literature
Reference	PMID: 130853
Authors	Lvov DK, Neronov VM, Gromashevsky VL, Skvortsova TM, Berezina LK, Sidorova GA, Zhmaeva ZM, Gofman YA, Klimenko SM, Fomina KB
Title	"Karshi" virus, a new flavivirus (Togaviridae) isolated from Ornithodoros papillipes (Birula, 1895) ticks in Uzbek S.S.R.
Journal	Arch Virol. 1976;50(1-2):29-36.
Comment	Vector: Ticks
Evidence	Literature
Reference	PMID: 18256443
Authors	Turell MJ, Whitehouse CA, Butler A, Baldwin C, Hottel H, Mores CN
Title	Assay for and replication of Karshi (mammalian tick-borne flavivirus group) virus in mice.
Journal	Am J Trop Med Hyg. 2008 Feb;78(2):344-7.
Comment	Vector: Ticks
DBLINKS	ViralZone: family, genus

Scientific Name	Kirsten murine sarcoma virus [TAX:11808]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus
RefSeq	NC_043426 Kirsten murine sarcoma virus (KiMSV) p15 env coding region and long terminal repeat (LTR).
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_043426 ICTV: 202005015 ViralZone: genus, family

Scientific Name	Koutango virus [TAX:44025]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_043116 Koutango virus strain Dak Ar D1470 NS5 protein (NS5) gene, partial cds.
Evidence	Literature
Reference	PMID: 9420202
Authors	Kuno G, Chang GJ, Tsuchiya KR, Karabatsos N, Cropp CB
Title	Phylogeny of the genus Flavivirus.
Journal	J Virol. 1998 Jan;72(1):73-83.
DBLINKS	KEGG BRITE: NC_043116 ICTV: 202003093 ViralZone: family, genus

Scientific Name	Lagos bat lyssavirus [TAX:38766]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Lyssavirus
RefSeq	NC_020807 Lagos bat virus isolate 0406SEN, complete genome.
Evidence	Other
Comment	Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_020807 ICTV: 202001731 ViralZone: family, genus

Scientific Name	Leanyer virus [TAX:999729]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Leanyer orthobunyavirus
RefSeq	NC_043561 Leanyer virus isolate AusN16701 segment M, complete sequence. NC_043562 Leanyer virus isolate AusN16701 segment S, complete sequence. NC_043563 Leanyer virus isolate AusN16701 segment L, complete sequence.
Evidence	Literature
Reference	PMID: 21402599
Authors	Savji N, Palacios G, Travassos da Rosa A, Hutchison S, Celone C, Hui J, Briese T, Calisher CH, Tesh RB, Lipkin WI
Title	Genomic and phylogenetic characterization of Leanyer virus, a novel orthobunyavirus isolated in northern Australia.
Journal	J Gen Virol. 2011 Jul;92(Pt 7):1676-1687.
Comment	Culture cell line: newborn mice
DBLINKS	KEGG BRITE: NC_043561 NC_043562 NC_043563 ViralZone: family, genus

Scientific Name	Liao ning virus [TAX:246280]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Sedoreovirinae; Seadornavirus
RefSeq	NC_007736 Liao ning virus segment 1, complete genome. NC_007737 Liao ning virus segment 2, complete genome. NC_007738 Liao ning virus segment 3, complete genome. NC_007739 Liao ning virus segment 4, complete genome. NC_007740 Liao ning virus segment 5, complete genome. NC_007741 Liao ning virus segment 6, complete genome. NC_007742 Liao ning virus segment 7, complete genome. NC_007743 Liao ning virus segment 8, complete genome. NC_007744 Liao ning virus segment 9, complete genome. NC_007745 Liao ning virus segment 10, complete genome. NC_007746 Liao ning virus segment 11, complete genome. NC_007747 Liao ning virus segment 12, complete genome.
Evidence	Literature
Reference	PMID: 16361432
Authors	Attoui H, Mohd Jaafar F, Belhouchet M, Tao S, Chen B, Liang G, Tesh RB, de Micco P, de Lamballerie X
Title	Liao ning virus, a new Chinese seadornavirus that replicates in transformed and embryonic mammalian cells.
Journal	J Gen Virol. 2006 Jan;87(Pt 1):199-208.
DBLINKS	KEGG BRITE: NC_007736 NC_007737 NC_007738 NC_007739 NC_007740 NC_007741 NC_007742 NC_007743 NC_007744 NC_007745 NC_007746 NC_007747 ICTV: 202004917 ViralZone: family, genus

Scientific Name	Ljungan virus [TAX:172314]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Parechovirus; Parechovirus B
RefSeq	NC_003976 Ljungan virus, complete genome.
Evidence	Literature
Reference	PMID: 12163611
Authors	Johansson S, Niklasson B, Maizel J, Gorbalenya AE, Lindberg AM
Title	Molecular analysis of three Ljungan virus isolates reveals a new, close-to-root lineage of the Picornaviridae with a cluster of two unrelated 2A proteins.
Journal	J Virol. 2002 Sep;76(17):8920-30.
Comment	Suckling mice inoculated with the virus died in 3–5 days. The virus is a suspected human pathogen.
Evidence	Literature
Reference	PMID: 10049824
Authors	Niklasson B, Kinnunen L, Hörnfeldt B, Hörling J, Benemar C, Hedlund KO, Matskova L, Hyypiä T, Winberg G
Title	A new picornavirus isolated from bank voles (Clethrionomys glareolus).
Journal	Virology. 1999 Mar 1;255(1):86-93.
Comment	Suckling mice inoculated with the virus died in 3–5 days. The virus is a suspected human pathogen.
DBLINKS	KEGG BRITE: NC_003976 ViralZone: family, genus

Scientific Name	Lymphocytic choriomeningitis mammarenavirus [TAX:11623]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Arenaviridae; Mammarenavirus
RefSeq	NC_004291 Lymphocytic choriomeningitis virus segment L, complete sequence. NC_004294 Lymphocytic choriomeningitis virus segment S, complete sequence.
DISEASE	H01324 Lymphocytic choriomeningitis
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004291 NC_004294 KEGG GENOME: T40091 ICTV: 202002586 ViralZone: family, genus

Scientific Name	Lyssavirus Ozernoe [TAX:642022]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Lyssavirus; unclassified Lyssavirus
RefSeq	NC_025408 Lyssavirus Ozernoe, complete genome.
Evidence	Literature
Reference	Leonova, G. N., Pavlenko, E. V., Il'ya, G. K., Somova, L. M., Tiunov, M. P., Plekhova, N. G., ... & Tkachev, S. E. (2013). The Fatal Case of Lyssavirus Encephalitis in the Russian Far East. INTECH Open Access Publisher.
Comment	Experimental host: Mouse
DBLINKS	KEGG BRITE: NC_025408 ViralZone: family, genus

Scientific Name	Maguari virus [TAX:11575]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Maguari orthobunyavirus
RefSeq	NC_055210 Maguari virus strain BeAr 7272 segment S, complete sequence. NC_055211 Maguari virus strain BeAr 7272 segment L, complete sequence. NC_055212 Maguari virus strain BeAr 7272 segment M, complete sequence.
Evidence	Literature
Reference	PMID: 5701826
Authors	Murphy FA, Harrison AK, Tzianabos T
Title	Electron microscopic observations of mouse brain infected with Bunyamwera group arboviruses.
Journal	J Virol. 1968 Nov;2(11):1315-25.
Comment	Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_055210 NC_055211 NC_055212 ViralZone: family, genus

Scientific Name	Maraba virus [TAX:1046251]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Vesiculovirus; Maraba vesiculovirus
RefSeq	NC_025255 Maraba virus from Brazil, complete genome.
Evidence	Literature
Reference	PMID: 20551913
Authors	Brun J, McManus D, Lefebvre C, Hu K, Falls T, Atkins H, Bell JC, McCart JA, Mahoney D, Stojdl DF
Title	Identification of genetically modified Maraba virus as an oncolytic rhabdovirus.
Journal	Mol Ther. 2010 Aug;18(8):1440-9.
DBLINKS	KEGG BRITE: NC_025255 ViralZone: family, genus

Scientific Name	Marituba virus [TAX:292278]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Marituba orthobunyavirus
RefSeq	NC_034495 Marituba virus strain BeAn15 RNA-dependent RNA polymerase gene, complete cds. NC_034496 Marituba virus strain BeAn15 nucleocapsid protein and nonstructural protein genes, complete cds. NC_034504 Marituba virus strain BeAn15 polyprotein gene, complete cds.
Evidence	Literature
Reference	PMID: 3729731
Authors	Carvalho MG, Frugulhetti IC, Rebello MA
Title	Marituba (Bunyaviridae) virus replication in cultured Aedes albopictus cells and in L-A9 cells.
Journal	Arch Virol. 1986;90(3-4):325-35.
DBLINKS	KEGG BRITE: NC_034495 NC_034496 NC_034504 ViralZone: family, genus

Scientific Name	Mengo virus [TAX:12107]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; Encephalomyocarditis virus
GenBank	DQ294633 Mengo virus isolate Rz-pMwt, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Minute virus of mice [TAX:10794]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1
RefSeq	NC_001510 Minute virus of mice, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001510 ViralZone: genus, family

Scientific Name	Moloney murine leukemia virus [TAX:11801]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus
RefSeq	NC_001501 Moloney murine leukemia virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001501 ViralZone: genus, family

Scientific Name	Moloney murine sarcoma virus [TAX:11809]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus
RefSeq	NC_001502 Moloney murine sarcoma virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001502 ICTV: 202005017 ViralZone: genus, family

Scientific Name	Monkeypox virus Zaire-96-I-16 [TAX:619591]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus; Monkeypox virus
RefSeq	NC_003310 Monkeypox virus Zaire-96-I-16, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_003310 ViralZone: subfamily, genus, family

Scientific Name	Mouse associated cyclovirus 1 [TAX:2169856]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus
RefSeq	NC_031755 Mouse associated cyclovirus 1 isolate Cyclo-sf1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_031755 ICTV: 202005770 ViralZone: genus, family

Scientific Name	Mouse astrovirus M-52/USA/2008 [TAX:1074210]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; unclassified Astroviridae
RefSeq	NC_015935 Mouse astrovirus M-52/USA/2008, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_015935 ViralZone: family

Scientific Name	Mouse kidney parvovirus [TAX:2316143]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Hamaparvovirinae; Chaphamaparvovirus; Rodent chaphamaparvovirus 1
RefSeq	NC_040843 Mouse kidney parvovirus strain Centenary Institute, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_040843 ViralZone: family

Scientific Name	Mouse mammary tumor virus [TAX:11757]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Betaretrovirus
RefSeq	NC_001503 Mouse mammary tumor virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001503 ICTV: 202004995 ViralZone: genus, family

Scientific Name	Mouse parvovirus 1 [TAX:35340]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1
GenBank	U12469 Mouse parvovirus 1 complete genome, nonstructural protein 1 (NS1) gene, complete cds and capsid protein (VP1) gene, complete cds.
DBLINKS	ViralZone: genus, family

Scientific Name	Mouse parvovirus 1e [TAX:402802]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1; Mouse parvovirus 1
GenBank	DQ898166 Mouse parvovirus 1e, complete genome.
DBLINKS	ViralZone: genus, family

Scientific Name	Mouse parvovirus 2 [TAX:344971]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1
GenBank	DQ196319 Mouse parvovirus 2, complete genome.
DBLINKS	ViralZone: genus, family

Scientific Name	Mouse parvovirus 3 [TAX:344970]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1
GenBank	DQ196318 Mouse parvovirus 3, complete genome.
DBLINKS	ViralZone: genus, family

Scientific Name	Mouse parvovirus 4a [TAX:576712]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1; Mouse parvovirus 4
GenBank	FJ440683 Mouse parvovirus 4a, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Mouse parvovirus 4b [TAX:576713]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1; Mouse parvovirus 4
GenBank	FJ445512 Mouse parvovirus 4b, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Mouse parvovirus 5a [TAX:576714]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Protoparvovirus; Rodent protoparvovirus 1
GenBank	FJ441297 Mouse parvovirus 5a, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Mukawa virus [TAX:1569922]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Mukawa phlebovirus
RefSeq	NC_043509 Mukawa virus cRNA, segment M, complete sequence, isolate: MKW73. NC_043510 Mukawa virus cRNA, segment L, complete sequence, isolate: MKW73. NC_043511 Mukawa virus cRNA, segment S, complete sequence, isolate: MKW73.
Evidence	Literature
Reference	PMID: 29898985
Authors	Matsuno K, Kajihara M, Nakao R, Nao N, Mori-Kajihara A, Muramatsu M, Qiu Y, Torii S, Igarashi M, Kasajima N, Mizuma K, Yoshii K, Sawa H, Sugimoto C, Takada A, Ebihara H
Title	The Unique Phylogenetic Position of a Novel Tick-Borne Phlebovirus Ensures an Ixodid Origin of the Genus <i>Phlebovirus</i>.
Journal	mSphere. 2018 Jun 27;3(3).
Comment	Culture cell line: Vero E6 cells,DH82 cells,Huh7 cells, and ISE6 cells
DBLINKS	KEGG BRITE: NC_043509 NC_043510 NC_043511 ViralZone: family, genus

Scientific Name	Murid betaherpesvirus 1 [TAX:10366]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Muromegalovirus
RefSeq	NC_004065 Murid herpesvirus 1, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_004065 ICTV: 202001468 ViralZone: subfamily, genus, family

Scientific Name	Murine adeno-associated virus 1 [TAX:2171377]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Dependoparvovirus; Rodent dependoparvovirus 1
RefSeq	NC_055485 Murine adeno-associated virus 1 isolate MAAV1/NYC/Manhattan/poolF1, partial genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_055485 ViralZone: genus, family

Scientific Name	Murine adeno-associated virus 2 [TAX:2171378]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Dependoparvovirus; Rodent dependoparvovirus 2
RefSeq	NC_055486 Murine adeno-associated virus 2 isolate MAAV2/NYC/Manhattan/poolF1, partial genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_055486 ViralZone: genus, family

Scientific Name	Murine adenovirus 2 [TAX:931972]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Murine mastadenovirus B
RefSeq	NC_014899 Murine adenovirus 2, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014899 ViralZone: family, genus

Scientific Name	Murine astrovirus [TAX:1141625]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes; Stellavirales; Astroviridae; unclassified Astroviridae
RefSeq	NC_018702 Murine astrovirus, complete genome.
Evidence	Literature
Reference	PMID: 22951832
Authors	Yokoyama CC, Loh J, Zhao G, Stappenbeck TS, Wang D, Huang HV, Virgin HW, Thackray LB
Title	Adaptive immunity restricts replication of novel murine astroviruses.
Journal	J Virol. 2012 Nov;86(22):12262-70.
DBLINKS	KEGG BRITE: NC_018702 ViralZone: family

Scientific Name	Murine bocavirus [TAX:2171381]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Parvovirinae; Bocaparvovirus; Rodent bocaparvovirus 2
RefSeq	NC_055487 Murine bocavirus isolate MBV/NYC/2014/Q055/1700, partial genome.
Evidence	RefSeq
Evidence	Literature
Reference	PMID: 29666290
Authors	Williams SH, Che X, Garcia JA, Klena JD, Lee B, Muller D, Ulrich W, Corrigan RM, Nichol S, Jain K, Lipkin WI
Title	Viral Diversity of House Mice in New York City.
Journal	mBio. 2018 Apr 17;9(2).
DBLINKS	KEGG BRITE: NC_055487 ViralZone: family, genus

Scientific Name	Murine coronavirus [TAX:694005]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus
GenBank	JX169867 Murine coronavirus strain JHM.WU, complete genome.
Evidence	Literature
Reference	PMID: 25589656
Authors	Zhang R, Li Y, Cowley TJ, Steinbrenner AD, Phillips JM, Yount BL, Baric RS, Weiss SR
Title	The nsp1, nsp13, and M proteins contribute to the hepatotropism of murine coronavirus JHM.WU.
Journal	J Virol. 2015 Apr;89(7):3598-609.
Comment	Culture cell line: 17Cl-1 (mouse), L2 (rat fibroblast cells) and baby hamster kidney cells
DBLINKS	ICTV: 202001865 ViralZone: genus, family

Scientific Name	Murine coronavirus inf-MHV-A59 [TAX:591071]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647225 Murine coronavirus inf-MHV-A59, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus MHV-1 [TAX:502106]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647223 Murine coronavirus MHV-1, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus MHV-3 [TAX:502104]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647224 Murine coronavirus MHV-3, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus MHV-JHM.IA [TAX:591068]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647226 Murine coronavirus MHV-JHM.IA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus RA59/R13 [TAX:591069]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647218 Murine coronavirus RA59/R13, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus RA59/SJHM [TAX:502107]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647220 Murine coronavirus RA59/SJHM, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus repA59/RJHM [TAX:429331]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647221 Murine coronavirus repA59/RJHM, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus repJHM/RA59 [TAX:429330]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647227 Murine coronavirus repJHM/RA59, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus RJHM/A [TAX:591070]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647219 Murine coronavirus RJHM/A, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine coronavirus SA59/RJHM [TAX:430472]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ647222 Murine coronavirus SA59/RJHM, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Murine cytomegalovirus (strain K181) [TAX:69156]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Muromegalovirus; Murid betaherpesvirus 1
GenBank	AM886412 Murine cytomegalovirus (strain K181), complete genome.
Evidence	UniProt
DBLINKS	ViralZone: subfamily, genus, family

Scientific Name	Murine hepatitis virus [TAX:11138]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus
RefSeq	NC_001846 Murine hepatitis virus strain MHV-A59 C12 mutant, complete genome. NC_048217 Murine hepatitis virus strain A59, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001846 NC_048217 ViralZone: genus, family

Scientific Name	Murine hepatitis virus strain 2 [TAX:76344]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	AF201929 Murine hepatitis virus strain 2, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Murine hepatitis virus strain A59 [TAX:11142]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	FJ884686 Murine hepatitis virus strain A59 B11 variant, complete genome.
Evidence	GenBank
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Murine hepatitis virus strain JHM [TAX:11144]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
RefSeq	AC_000192 Murine hepatitis virus strain JHM, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: AC_000192 ViralZone: genus, family

Scientific Name	Murine hepatitis virus strain S/3239-17 [TAX:1163669]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus; Murine coronavirus; Murine hepatitis virus
GenBank	JQ173883 Murine hepatitis virus strain S/3239-17, complete genome.
Evidence	Other
Comment	note="original source ATCC VR-766"
DBLINKS	ViralZone: genus, family

Scientific Name	Murine leukemia virus [TAX:11786]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus
GenBank	AB187566 Murine leukemia virus Graffi GV-1.4 DNA, complete genome.
Evidence	Literature
Reference	PMID: 8392610
Authors	Ru M, Shustik C, Rassart E
Title	Graffi murine leukemia virus: molecular cloning and characterization of the myeloid leukemia-inducing agent.
Journal	J Virol. 1993 Aug;67(8):4722-31.
Comment	Culture cell line: NIH 3T3, BALB/c (mouse fibroblast cells) and ratXC, Rat-1 (Rat fibroblast cells)
DBLINKS	ICTV: 202005018 ViralZone: genus, family

Scientific Name	Murine mastadenovirus A [TAX:129956]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus
RefSeq	AC_000012 Murine adenovirus A, complete genome. NC_000942 Murine adenovirus A, complete genome.
Evidence	UniProt
Evidence	Literature
Reference	PMID: 9381795
Authors	Meissner JD, Hirsch GN, LaRue EA, Fulcher RA, Spindler KR
Title	Completion of the DNA sequence of mouse adenovirus type 1: sequence of E2B, L1, and L2 (18-51 map units).
Journal	Virus Res. 1997 Sep;51(1):53-64.
DBLINKS	KEGG BRITE: AC_000012 NC_000942 ICTV: 202002429 ViralZone: family, genus

Scientific Name	Murine norovirus [TAX:357231]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV
GenBank	DQ911368 Murine norovirus strain Berlin/04/06/DE, complete genome.
Evidence	Literature
Reference	PMID: 16698991
Authors	Wobus CE, Thackray LB, Virgin HW 4th
Title	Murine norovirus: a model system to study norovirus biology and pathogenesis.
Journal	J Virol. 2006 Jun;80(11):5104-12.
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus 1 [TAX:223997]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus
GenBank	EF014462 Murine norovirus 1 clone CW3, complete genome.
Evidence	Literature
Reference	PMID: 17229692
Authors	Mumphrey SM, Changotra H, Moore TN, Heimann-Nichols ER, Wobus CE, Reilly MJ, Moghadamfalahi M, Shukla D, Karst SM
Title	Murine norovirus 1 infection is associated with histopathological changes in immunocompetent hosts, but clinical disease is prevented by STAT1-dependent interferon responses.
Journal	J Virol. 2007 Apr;81(7):3251-63.
Comment	Culture cell line: RAW264.7 (murine macrophage cells)
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus 3 [TAX:351048]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus
GenBank	KC792553 Murine norovirus 3 clone P6, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR1/2005/USA [TAX:463718]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004672 Murine norovirus GV/CR1/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR10/2005/USA [TAX:463724]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004678 Murine norovirus GV/CR10/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR11/2005/USA [TAX:463725]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004679 Murine norovirus GV/CR11/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR13/2005/USA [TAX:463726]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004680 Murine norovirus GV/CR13/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR15/2005/USA [TAX:463727]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004681 Murine norovirus GV/CR15/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR17/2005/USA [TAX:463728]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004682 Murine norovirus GV/CR17/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR18/2005/DEU [TAX:463729]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004683 Murine norovirus GV/CR18/2005/DEU, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR3/2005/USA [TAX:463719]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004673 Murine norovirus GV/CR3/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR4/2005/USA [TAX:463720]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004674 Murine norovirus GV/CR4/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR5/2005/USA [TAX:463721]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004675 Murine norovirus GV/CR5/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR6/2005/USA [TAX:463722]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004676 Murine norovirus GV/CR6/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/CR7/2005/USA [TAX:463723]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004677 Murine norovirus GV/CR7/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-2409/2005/USA [TAX:1028321]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320644 Murine norovirus GV/NIH-2409/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-2410/2005/USA [TAX:1028322]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320645 Murine norovirus GV/NIH-2410/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-2411/2005/USA [TAX:1028323]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320646 Murine norovirus GV/NIH-2411/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-2747/2005/USA [TAX:1028324]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320647 Murine norovirus GV/NIH-2747/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-2750/2005/USA [TAX:1028325]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320648 Murine norovirus GV/NIH-2750/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-4421/2005/USA [TAX:1028326]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320649 Murine norovirus GV/NIH-4421/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-4428/2005/USA [TAX:1028327]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320650 Murine norovirus GV/NIH-4428/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-4431/2005/USA [TAX:1028328]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320651 Murine norovirus GV/NIH-4431/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-A114/2006/USA [TAX:1028329]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320652 Murine norovirus GV/NIH-A114/2006/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/NIH-D220/2007/USA [TAX:1028330]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	JF320653 Murine norovirus GV/NIH-D220/2007/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU11/2005/USA [TAX:463709]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004663 Murine norovirus GV/WU11/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU12/2005/USA [TAX:463710]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004664 Murine norovirus GV/WU12/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU20/2005/USA [TAX:463711]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004665 Murine norovirus GV/WU20/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU21/2005/USA [TAX:463712]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004666 Murine norovirus GV/WU21/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU22/2005/USA [TAX:463713]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004667 Murine norovirus GV/WU22/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU23/2005/USA [TAX:463714]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004668 Murine norovirus GV/WU23/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU24/2005/USA [TAX:463715]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004669 Murine norovirus GV/WU24/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU25/2005/USA [TAX:463716]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004670 Murine norovirus GV/WU25/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine norovirus GV/WU26/2005/USA [TAX:463717]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus GV; Murine norovirus; Murine norovirus GV
GenBank	EU004671 Murine norovirus GV/WU26/2005/USA, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: family, genus

Scientific Name	Murine orthopneumovirus [TAX:11263]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Orthopneumovirus
GenBank	AY729016 Pneumonia virus of mice strain 15, complete genome.
Evidence	Literature
Reference	PMID: 15744580
Authors	Krempl CD, Lamirande EW, Collins PL
Title	Complete sequence of the RNA genome of pneumonia virus of mice (PVM).
Journal	Virus Genes. 2005 Mar;30(2):237-49.
DBLINKS	ICTV: 202001652 ViralZone: family

Scientific Name	Murine osteosarcoma virus [TAX:11830]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus
RefSeq	NC_001506 Murine osteosarcoma virus, complete genome.
Evidence	Literature
Reference	PMID: 189372
Authors	Finkel MP, Reilly CA Jr, Biskis BO
Title	Pathogenesis of radiation and virus-induced bone tumors.
Journal	Recent Results Cancer Res. 1976;(54):92-103.
DBLINKS	KEGG BRITE: NC_001506 ViralZone: genus, family

Scientific Name	Murine polyomavirus strain A2 [TAX:10636]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Alphapolyomavirus; Mus musculus polyomavirus 1
GenBank	J02288 Murine polyomavirus strain A2, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: family, genus

Scientific Name	Murine polyomavirus strain BG [TAX:179241]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Alphapolyomavirus; Mus musculus polyomavirus 1
RefSeq	NC_001515 Murine polyomavirus strain BG, complete genome.
Evidence	RefSeq
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001515 ViralZone: family, genus

Scientific Name	Murine respirovirus [TAX:11191]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Respirovirus
RefSeq	NC_001552 Sendai virus genomic RNA, antisense, complete sequence.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001552 ICTV: 202001624 ViralZone: genus, family

Scientific Name	Murine roseolovirus [TAX:1940555]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Roseolovirus; unclassified Roseolovirus
RefSeq	NC_033620 Murine roseolovirus isolate YOK1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_033620 ViralZone: subfamily, family, genus

Scientific Name	Murine type C retrovirus [TAX:44561]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; unclassified Murine leukemia virus
RefSeq	NC_001702 Murine type C retrovirus, complete genome.
Evidence	Literature
Reference	PMID: 11222735
Authors	Bromham L, Clark F, McKee JJ
Title	Discovery of a novel murine type C retrovirus by data mining.
Journal	J Virol. 2001 Mar;75(6):3053-7.
DBLINKS	KEGG BRITE: NC_001702 ViralZone: genus, family

Scientific Name	Mus musculus mobilized endogenous polytropic provirus [TAX:590745]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus
RefSeq	NC_029853 Mus musculus mobilized endogenous polytropic provirus clone 15 truncated gag-pol polyprotein (gag) and envelope protein (env) genes, complete cds.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_029853 ViralZone: genus, family

Scientific Name	Mus musculus papillomavirus type 1 [TAX:763552]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Pipapillomavirus; Pipapillomavirus 2
RefSeq	NC_014326 Mus musculus papillomavirus type 1 isolate MusPV, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_014326 ViralZone: family, genus

Scientific Name	Mus musculus polyomavirus 2 [TAX:1891770]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Betapolyomavirus
RefSeq	NC_001505 Murine pneumotropic virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001505 ICTV: 202004469 ViralZone: family

Scientific Name	Mus musculus polyomavirus 3 [TAX:2171394]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Sepolyvirales; Polyomaviridae; Betapolyomavirus
RefSeq	NC_055488 Mus musculus polyomavirus 3 isolate MPoV3/NYC/2015/K003/3347, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_055488 ICTV: 202007116 ViralZone: family

Scientific Name	Norovirus GV [TAX:1246677]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus
RefSeq	NC_008311 Norovirus GV, complete genome.
Evidence	Literature
Reference	PMID: 16343580
Authors	Zheng DP, Ando T, Fankhauser RL, Beard RS, Glass RI, Monroe SS
Title	Norovirus classification and proposed strain nomenclature.
Journal	Virology. 2006 Mar 15;346(2):312-23.
Comment	Culture cell line: RAW 264.7 cells
Evidence	Literature
Reference	PMID: 30646786
Authors	Holmdahl T, Odenholt I, Riesbeck K, Medstrand P, Widell A
Title	Hydrogen peroxide vapour treatment inactivates norovirus but has limited effect on post-treatment viral RNA levels.
Journal	Infect Dis (Lond). 2019 Mar;51(3):197-205.
Comment	Culture cell line: RAW 264.7 cells
DBLINKS	KEGG BRITE: NC_008311 ViralZone: family, genus

Scientific Name	Norovirus mouse/Hannover1/2007/DEU [TAX:549341]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Caliciviridae; Norovirus; Norwalk virus; Norovirus isolates
GenBank	EU854589 Norovirus mouse/Hannover1/2007/DEU, complete genome.
Evidence	Literature
Reference	Marcel Achard, Michael Mähler, Detlef Neumann, Anna Smoczek, Hans J. Hedrich, Andre Bleich, W1633 Impact of Murine Norovirus On a Mouse Model of IBD, VOLUME 136, ISSUE 5, SUPPLEMENT 1, A-706, MAY 01, 2009
DBLINKS	ViralZone: family, genus

Scientific Name	Ntaya virus [TAX:64292]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_018705 Ntaya virus, complete cds.
Evidence	Literature
Reference	PMID: 22996737
Authors	Dilcher M, Sall AA, Hufert FT, Weidmann M
Title	Full-length genome sequence of Ntaya virus.
Journal	Virus Genes. 2013 Feb;46(1):162-4.
DBLINKS	KEGG BRITE: NC_018705 KEGG GENOME: T40354 ICTV: 202003101 ViralZone: family, genus

Scientific Name	Nyamanini nyavirus [TAX:644610]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Nyamiviridae; Nyavirus
RefSeq	NC_012703 Nyamanini virus, complete genome.
Evidence	Literature
Reference	PMID: 19279111
Authors	Mihindukulasuriya KA, Nguyen NL, Wu G, Huang HV, da Rosa AP, Popov VL, Tesh RB, Wang D
Title	Nyamanini and midway viruses define a novel taxon of RNA viruses in the order Mononegavirales.
Journal	J Virol. 2009 May;83(10):5109-16.
DBLINKS	KEGG BRITE: NC_012703 ICTV: 202001580 ViralZone: family, genus

Scientific Name	Orthohepevirus A [TAX:1678143]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Hepelivirales; Hepeviridae; Orthohepevirus
RefSeq	NC_001434 Hepatitis E virus, complete genome.
DISEASE	H00415 Hepatitis E; Hepatitis E virus (HEV) infection
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001434 KEGG GENOME: T40067 ICTV: 202003665 ViralZone: family, genus

Scientific Name	Oz virus [TAX:2137161]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Thogotovirus; unclassified Thogotovirus
RefSeq	NC_040730 Oz virus viral cRNA, segment 1, complete sequence, strain: EH8. NC_040731 Oz virus viral cRNA, segment 2, complete sequence, strain: EH8. NC_040732 Oz virus viral cRNA, segment 3, complete sequence, strain: EH8. NC_040733 Oz virus viral cRNA, segment 5, complete sequence, strain: EH8. NC_040734 Oz virus viral cRNA, segment 6, complete sequence, strain: EH8. NC_040735 Oz virus viral cRNA, segment 4, complete sequence, strain: EH8.
Evidence	Literature
Reference	PMID: 29548745
Authors	Ejiri H, Lim CK, Isawa H, Fujita R, Murota K, Sato T, Kobayashi D, Kan M, Hattori M, Kimura T, Yamaguchi Y, Takayama-Ito M, Horiya M, Posadas-Herrera G, Minami S, Kuwata R, Shimoda H, Maeda K, Katayama Y, Mizutani T, Saijo M, Kaku K, Shinomiya H, Sawabe K
Title	Characterization of a novel thogotovirus isolated from Amblyomma testudinarium ticks in Ehime, Japan: A significant phylogenetic relationship to Bourbon virus.
Journal	Virus Res. 2018 Apr 2;249:57-65.
Comment	Culture cell line: Vero, BHK-21 and DH82
DBLINKS	KEGG BRITE: NC_040730 NC_040731 NC_040732 NC_040733 NC_040734 NC_040735 ViralZone: genus

Scientific Name	Pixuna virus [TAX:60876]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus
RefSeq	NC_038673 Pixuna virus strain Pixuna BeAr 35645, complete genome.
Evidence	Literature
Reference	PMID: 962587
Authors	Jahrling PB, Navarro E, Scherer WF
Title	Interferon induction and sensitivity as correlates to virulence of Venezuelan encephalitis viruses for hamsters.
Journal	Arch Virol. 1976;51(1-2):23-35.
Comment	Culture cell line: baby hamster kidney-21 cells, chicken-embryonic cell(CEC cells)
Evidence	Literature
Reference	PMID: 9886206
Authors	Kinney RM, Pfeffer M, Tsuchiya KR, Chang GJ, Roehrig JT
Title	Nucleotide sequences of the 26S mRNAs of the viruses defining the Venezuelan equine encephalitis antigenic complex.
Journal	Am J Trop Med Hyg. 1998 Dec;59(6):952-64.
Comment	Culture cell line: baby hamster kidney-21 cells, chicken-embryonic cell(CEC cells)
DBLINKS	KEGG BRITE: NC_038673 ICTV: 202005101 ViralZone: family, genus

Scientific Name	Pneumonia virus of mice 15 [TAX:296738]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Orthopneumovirus; Murine orthopneumovirus
GenBank	AY743910 Pneumonia virus of mice 15, complete genome.
Evidence	GenBank
Evidence	UniProt
DBLINKS	ViralZone: family

Scientific Name	Pneumonia virus of mice J3666 [TAX:270473]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Pneumoviridae; Orthopneumovirus; Murine orthopneumovirus
RefSeq	NC_006579 Pneumonia virus of mice J3666, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_006579 ViralZone: family

Scientific Name	Polytropic murine leukemia virus [TAX:1511763]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; unclassified Murine leukemia virus
GenBank	KJ668271 Polytropic murine leukemia virus, complete genome.
Evidence	Literature
Reference	PMID: 24912157
Authors	Triviai I, Ziegler M, Bergholz U, Oler AJ, Stübig T, Prassolov V, Fehse B, Kozak CA, Kröger N, Stocking C
Title	Endogenous retrovirus induces leukemia in a xenograft mouse model for primary myelofibrosis.
Journal	Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8595-600.
DBLINKS	ViralZone: genus, family

Scientific Name	Precarious point virus [TAX:487097]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Uukuvirus; Precarious Point uukuvirus
RefSeq	NC_055336 Precarious point virus segment S, complete sequence. NC_055337 Precarious point virus segment L, complete sequence. NC_055338 Precarious point virus segment M, complete sequence.
Evidence	Literature
Reference	PMID: 2984951
Authors	St George TD, Doherty RL, Carley JG, Filippich C, Brescia A, Casals J, Kemp DH, Brothers N
Title	The isolation of arboviruses including a new flavivirus and a new Bunyavirus from Ixodes (Ceratixodes) uriae (Ixodoidea: Ixodidae) collected at Macquarie Island, Australia, 1975-1979.
Journal	Am J Trop Med Hyg. 1985 Mar;34(2):406-12.
Evidence	Literature
Reference	PMID: 23283959
Authors	Palacios G, Savji N, Travassos da Rosa A, Guzman H, Yu X, Desai A, Rosen GE, Hutchison S, Lipkin WI, Tesh R
Title	Characterization of the Uukuniemi virus group (Phlebovirus: Bunyaviridae): evidence for seven distinct species.
Journal	J Virol. 2013 Mar;87(6):3187-95.
DBLINKS	KEGG BRITE: NC_055336 NC_055337 NC_055338 ViralZone: family

Scientific Name	PreXMRV-1 [TAX:1038068]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus; Murine leukemia-related retroviruses; XMRV-related viruses
RefSeq	NC_007815 PreXMRV-1 provirus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_007815 ViralZone: genus, family

Scientific Name	Quaranfil quaranjavirus [TAX:688436]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Insthoviricetes; Articulavirales; Orthomyxoviridae; Quaranjavirus
RefSeq	NC_038817 Quaranfil virus isolate EG T 377 polymerase PB2 (PB2) gene, complete cds. NC_038818 Quaranfil virus isolate EG T 377 polymerase PA (PA) gene, complete cds. NC_038819 Quaranfil virus isolate EG T 377 hypothetical protein gene, complete cds. NC_038820 Quaranfil virus isolate EG T 377 hemagglutinin (HA) gene, complete cds. NC_038821 Quaranfil virus isolate EG T 377 polymerase PB1 (PB1) gene, complete cds. NC_038822 Quaranfil virus isolate EG T 377 unknown gene.
Evidence	Literature
Reference	PMID: 19726499
Authors	Presti RM, Zhao G, Beatty WL, Mihindukulasuriya KA, da Rosa AP, Popov VL, Tesh RB, Virgin HW, Wang D
Title	Quaranfil, Johnston Atoll, and Lake Chad viruses are novel members of the family Orthomyxoviridae.
Journal	J Virol. 2009 Nov;83(22):11599-606.
Comment	Culture cell line: vero cells, 3T12 cells
DBLINKS	KEGG BRITE: NC_038817 NC_038818 NC_038819 NC_038820 NC_038821 NC_038822 ICTV: 202003967 ViralZone: genus

Scientific Name	Rabovirus D1 [TAX:2682606]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Rabovirus; Rabovirus D
RefSeq	NC_055160 Rabovirus D1 isolate MPV/NYC/2014/M005/0074, partial genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_055160 ViralZone: family, genus

Scientific Name	Rauscher murine leukemia virus [TAX:11938]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; unclassified Murine leukemia virus
GenBank	U94692 Rauscher murine leukemia virus, complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	rhinovirus A39 [TAX:185907]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Enterovirus; Rhinovirus A
GenBank	AY751783 Human rhinovirus 39, complete genome.
Evidence	Literature
Reference	PMID: 15827151
Authors	Harris JR, Racaniello VR
Title	Amino acid changes in proteins 2B and 3A mediate rhinovirus type 39 growth in mouse cells.
Journal	J Virol. 2005 May;79(9):5363-73.
Comment	Culture cell line: CAM-L, HeLa R19 cells
DBLINKS	ViralZone: genus, family

Scientific Name	Rosavirus A2 [TAX:1511807]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Rosavirus; Rosavirus A
RefSeq	NC_024070 Rosavirus 2 strain GA7403, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_024070 ViralZone: family, genus

Scientific Name	Saboya virus [TAX:64284]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_033697 Saboya virus strain Dak AR D4600 polyprotein gene, complete cds.
Evidence	Literature
Reference	PMID: 19741066
Authors	Grard G, Moureau G, Charrel RN, Holmes EC, Gould EA, de Lamballerie X
Title	Genomics and evolution of Aedes-borne flaviviruses.
Journal	J Gen Virol. 2010 Jan;91(Pt 1):87-94.
DBLINKS	KEGG BRITE: NC_033697 ICTV: 202003107 ViralZone: family, genus

Scientific Name	Saffold virus [TAX:434309]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; Theilovirus
RefSeq	NC_009448 Saffold virus, complete genome.
Evidence	Literature
Reference	PMID: 17460053
Authors	Jones MS, Lukashov VV, Ganac RD, Schnurr DP
Title	Discovery of a novel human picornavirus in a stool sample from a pediatric patient presenting with fever of unknown origin.
Journal	J Clin Microbiol. 2007 Jul;45(7):2144-50.
Comment	Culture cell line: HFDK cells. Laboratory host: Mus musculus
DBLINKS	KEGG BRITE: NC_009448 ViralZone: genus, family

Scientific Name	Sal Vieja virus [TAX:64301]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_043117 Sal Vieja virus strain 38TWM-106 NS5 protein (NS5) gene, partial cds.
Evidence	Literature
Reference	PMID: 9420202
Authors	Kuno G, Chang GJ, Tsuchiya KR, Karabatsos N, Cropp CB
Title	Phylogeny of the genus Flavivirus.
Journal	J Virol. 1998 Jan;72(1):73-83.
Comment	Laboratory host: mouse
DBLINKS	KEGG BRITE: NC_043117 ICTV: 202003108 ViralZone: family, genus

Scientific Name	SARS coronavirus MA15 [TAX:633137]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; recombinant SARSr-CoV
GenBank	FJ882945 SARS coronavirus MA15 isolate P3pp6, complete genome.
Evidence	Literature
Reference	PMID: 17222058
Authors	Roberts A, Deming D, Paddock CD, Cheng A, Yount B, Vogel L, Herman BD, Sheahan T, Heise M, Genrich GL, Zaki SR, Baric R, Subbarao K
Title	A mouse-adapted SARS-coronavirus causes disease and mortality in BALB/c mice.
Journal	PLoS Pathog. 2007 Jan;3(1):e5.
Comment	These observations suggest that mice infected with MA15 die from an overwhelming viral infection with extensive, virally mediated destruction of pneumocytes and ciliated epithelial cells.
DBLINKS	ViralZone: genus, family

Scientific Name	SARS coronavirus MA15 ExoN1 [TAX:633140]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus; recombinant SARSr-CoV
GenBank	FJ882942 SARS coronavirus MA15 ExoN1 isolate P3pp5, complete genome.
Evidence	Literature
Reference	PMID: 17222058
Authors	Roberts A, Deming D, Paddock CD, Cheng A, Yount B, Vogel L, Herman BD, Sheahan T, Heise M, Genrich GL, Zaki SR, Baric R, Subbarao K
Title	A mouse-adapted SARS-coronavirus causes disease and mortality in BALB/c mice.
Journal	PLoS Pathog. 2007 Jan;3(1):e5.
	Eckerle, L. D., Becker, M. M., Halpin, R. A., Li, K., Venter, E., Lu, X., ... & Spiro, D. J. (2010). Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing. PLoS pathogens, 6(5), e1000896.
DBLINKS	ViralZone: genus, family

Scientific Name	SARS coronavirus PUMC01 [TAX:253433]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus; Severe acute respiratory syndrome-related coronavirus
GenBank	AY350750 SARS coronavirus PUMC01, complete genome.
Evidence	Literature
Reference	PMID: 16007097
Authors	Kuba K, Imai Y, Rao S, Gao H, Guo F, Guan B, Huan Y, Yang P, Zhang Y, Deng W, Bao L, Zhang B, Liu G, Wang Z, Chappell M, Liu Y, Zheng D, Leibbrandt A, Wada T, Slutsky AS, Liu D, Qin C, Jiang C, Penninger JM
Title	A crucial role of angiotensin converting enzyme 2 (ACE2) in SARS coronavirus-induced lung injury.
Journal	Nat Med. 2005 Aug;11(8):875-9.
DBLINKS	ViralZone: genus, family

Scientific Name	Sebokele virus 1 [TAX:1294177]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Parechovirus; Parechovirus C
RefSeq	NC_021482 Sebokele virus 1 ORF1 gene for polyprotein, genomic RNA, strain 1.
Evidence	Other
Comment	mouse
DBLINKS	KEGG BRITE: NC_021482 ViralZone: family, genus

Scientific Name	Silverwater virus [TAX:1564099]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Uukuvirus; Silverwater uukuvirus
RefSeq	NC_055369 Silverwater virus isolate Can131 segment M, complete sequence. NC_055370 Silverwater virus isolate Can131 segment L, complete sequence. NC_055371 Silverwater virus isolate Can131 segment S, complete sequence.
Evidence	Literature
Reference	PMID: 4994894
Authors	Hoff GL, Iversen JO, Yuill TM, Anslow RO, Jackson JO, Hanson RP
Title	Isolations of Silverwater virus from naturally infected snowshoe hares and Haemaphysalis ticks from Alberta and Wisconsin.
Journal	Am J Trop Med Hyg. 1971 Mar;20(2):320-5.
Comment	Laboratory host: suckling mice
DBLINKS	KEGG BRITE: NC_055369 NC_055370 NC_055371 ViralZone: family

Scientific Name	Sindbis-like virus [TAX:44419]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Togaviridae; Alphavirus; Sindbis virus
GenBank	U38304 Sindbis-like virus isolate Girdwood S.A., complete genome. U38305 Sindbis-like virus isolate S.A.AR86, complete genome.
Evidence	Literature
Reference	PMID: 2926866
Authors	Russell DL, Dalrymple JM, Johnston RE
Title	Sindbis virus mutations which coordinately affect glycoprotein processing, penetration, and virulence in mice.
Journal	J Virol. 1989 Apr;63(4):1619-29.
Evidence	Literature
Reference	PMID: 8806532
Authors	Simpson DA, Davis NL, Lin SC, Russell D, Johnston RE
Title	Complete nucleotide sequence and full-length cDNA clone of S.A.AR86 a South African alphavirus related to Sindbis.
Journal	Virology. 1996 Aug 15;222(2):464-9.
DBLINKS	ViralZone: family, genus

Scientific Name	Sitiawan virus [TAX:93923]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; Tembusu virus
GenBank	JX477686 Sitiawan virus, complete genome.
Evidence	Literature
Reference	PMID: 22764316
Authors	Liu P, Lu H, Li S, Moureau G, Deng YQ, Wang Y, Zhang L, Jiang T, de Lamballerie X, Qin CF, Gould EA, Su J, Gao GF
Title	Genomic and antigenic characterization of the newly emerging Chinese duck egg-drop syndrome flavivirus: genomic comparison with Tembusu and Sitiawan viruses.
Journal	J Gen Virol. 2012 Oct;93(Pt 10):2158-70.
DBLINKS	ViralZone: family, genus

Scientific Name	Spleen focus-forming virus [TAX:11819]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus
RefSeq	NC_001500 Spleen focus-forming virus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001500 ViralZone: genus, family

Scientific Name	Tamana bat virus [TAX:161675]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus; unclassified Flavivirus
RefSeq	NC_003996 Tamana bat virus, genome.
Evidence	Literature
Reference	PMID: 12237426
Authors	de Lamballerie X, Crochu S, Billoir F, Neyts J, de Micco P, Holmes EC, Gould EA
Title	Genome sequence analysis of Tamana bat virus and its relationship with the genus Flavivirus.
Journal	J Gen Virol. 2002 Oct;83(Pt 10):2443-2454.
Comment	Culture cell line: Vero cells Laboratory host: house mouse
DBLINKS	KEGG BRITE: NC_003996 ViralZone: family, genus

Scientific Name	Tataguine virus [TAX:1623310]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Tataguine orthobunyavirus
RefSeq	NC_043606 Tataguine virus strain H9963 nucleocapsid protein gene, complete cds. NC_043607 Tataguine virus strain H9963 RNA-dependent RNA polymerase gene, complete cds. NC_043608 Tataguine virus strain H9963 polyprotein gene, complete cds.
Evidence	Literature
Reference	PMID: 26610546
Authors	Shchetinin AM, Lvov DK, Deriabin PG, Botikov AG, Gitelman AK, Kuhn JH, Alkhovsky SV
Title	Genetic and Phylogenetic Characterization of Tataguine and Witwatersrand Viruses and Other Orthobunyaviruses of the Anopheles A, Capim, Guamá, Koongol, Mapputta, Tete, and Turlock Serogroups.
Journal	Viruses. 2015 Nov 23;7(11):5987-6008.
Comment	Laboratory host: mouse(Mus musculus)
DBLINKS	KEGG BRITE: NC_043606 NC_043607 NC_043608 ViralZone: family, genus

Scientific Name	Theiler's encephalomyelitis virus [TAX:12124]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; Theilovirus
GenBank	M20301 Theiler murine encephalomyelitis virus, complete genome.
Evidence	Literature
Reference	PMID: 2834872
Authors	Ohara Y, Stein S, Fu JL, Stillman L, Klaman L, Roos RP
Title	Molecular cloning and sequence determination of DA strain of Theiler's murine encephalomyelitis viruses.
Journal	Virology. 1988 May;164(1):245-55.
DBLINKS	ViralZone: genus, family

Scientific Name	Theiler's murine encephalomyeltits virus GDVII [TAX:12127]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B
GenBank	X56019 Theilers murine encephalomyelitis virus (TMEV) complete genome.
Evidence	UniProt
DBLINKS	ViralZone: genus, family

Scientific Name	Theiler's-like virus of rats [TAX:204729]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; Theilovirus
GenBank	AB090161 Theiler's-like virus of rats NGS910 genomic RNA, complete genome.
Evidence	Literature
Reference	PMID: 12784854
Authors	Ohsawa K, Watanabe Y, Miyata H, Sato H
Title	Genetic analysis of a Theiler-like virus isolated from rats.
Journal	Comp Med. 2003 Apr;53(2):191-6.
DBLINKS	ViralZone: genus, family

Scientific Name	Theilovirus [TAX:204711]
Lineage	Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B
RefSeq	NC_001366 Theilovirus, complete genome.
Evidence	UniProt
DBLINKS	KEGG BRITE: NC_001366 ViralZone: genus, family

Scientific Name	Tick-borne encephalitis virus [TAX:11084]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_001672 Tick-borne encephalitis virus, complete genome.
DISEASE	H00380 Tick-borne viral encephalitis
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_001672 KEGG GENOME: T40061 ICTV: 202003114 ViralZone: family, genus

Scientific Name	Uganda S virus [TAX:64297]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_033698 Uganda S virus polyprotein gene, complete cds.
Evidence	Literature
Reference	PMID: 19741066
Authors	Grard G, Moureau G, Charrel RN, Holmes EC, Gould EA, de Lamballerie X
Title	Genomics and evolution of Aedes-borne flaviviruses.
Journal	J Gen Virol. 2010 Jan;91(Pt 1):87-94.
DBLINKS	KEGG BRITE: NC_033698 ICTV: 202003116 ViralZone: family, genus

Scientific Name	Wood mouse herpesvirus [TAX:432370]
Lineage	Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Rhadinovirus; Murid gammaherpesvirus 7
RefSeq	NC_055233 Wood mouse herpesvirus strain WM8, complete genome.
Evidence	Literature
Reference	PMID: 19940063
Authors	Hughes DJ, Kipar A, Milligan SG, Cunningham C, Sanders M, Quail MA, Rajandream MA, Efstathiou S, Bowden RJ, Chastel C, Bennett M, Sample JT, Barrell B, Davison AJ, Stewart JP
Title	Characterization of a novel wood mouse virus related to murid herpesvirus 4.
Journal	J Gen Virol. 2010 Apr;91(Pt 4):867-79.
Comment	Culture cell line: NIH3T3 cells
DBLINKS	KEGG BRITE: NC_055233 ViralZone: family, subfamily, genus

Scientific Name	Xenotropic MuLV-related virus [TAX:438045]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus; Murine leukemia-related retroviruses; XMRV-related viruses
GenBank	HQ154630 Xenotropic MuLV-related virus isolate xmlv15, complete genome.
Evidence	GenBank
DBLINKS	ViralZone: genus, family

Scientific Name	Xenotropic MuLV-related virus 22Rv1/CWR-R1 [TAX:749340]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus; Murine leukemia-related retroviruses; XMRV-related viruses; Xenotropic MuLV-related virus
GenBank	FN692043 Xenotropic MuLV-related virus 22Rv1/CWR-R1 complete proviral genome.
Evidence	Literature
Reference	PMID: 20335265
Authors	Paprotka T, Venkatachari NJ, Chaipan C, Burdick R, Delviks-Frankenberry KA, Hu WS, Pathak VK
Title	Inhibition of xenotropic murine leukemia virus-related virus by APOBEC3 proteins and antiviral drugs.
Journal	J Virol. 2010 Jun;84(11):5719-29.
Evidence	Literature
Reference	PMID: 21628392
Authors	Paprotka T, Delviks-Frankenberry KA, Cingöz O, Martinez A, Kung HJ, Tepper CG, Hu WS, Fivash MJ Jr, Coffin JM, Pathak VK
Title	Recombinant origin of the retrovirus XMRV.
Journal	Science. 2011 Jul 1;333(6038):97-101.
DBLINKS	ViralZone: genus, family

Scientific Name	Xenotropic MuLV-related virus RKO [TAX:1049224]
Lineage	Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus; unclassified Gammaretrovirus; Murine leukemia-related retroviruses; XMRV-related viruses; Xenotropic MuLV-related virus
GenBank	JF274252 Xenotropic MuLV-related virus RKO, complete genome.
Evidence	Literature
Reference	PMID: 21750403
Authors	Zhang YA, Maitra A, Hsieh JT, Rudin CM, Peacock CD, Karikari C, Brekken RA, Stastny V, Gao B, Girard L, Wistuba I, Frenkel E, Minna JD, Gazdar AF
Title	Frequent detection of infectious xenotropic murine leukemia virus (XMLV) in human cultures established from mouse xenografts.
Journal	Cancer Biol Ther. 2011 Oct 1;12(7):617-28.
DBLINKS	ViralZone: genus, family

Scientific Name	Yokapox virus [TAX:1076255]
Lineage	Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Centapoxvirus
RefSeq	NC_015960 Yoka poxvirus, complete genome.
Evidence	Literature
Reference	PMID: 21813608
Authors	Zhao G, Droit L, Tesh RB, Popov VL, Little NS, Upton C, Virgin HW, Wang D
Title	The genome of Yoka poxvirus.
Journal	J Virol. 2011 Oct;85(19):10230-8.
DBLINKS	KEGG BRITE: NC_015960 ICTV: 202004755 ViralZone: subfamily, family, genus

Scientific Name	Yunnan orbivirus [TAX:306276]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Sedoreovirinae; Orbivirus
RefSeq	NC_007656 Yunnan orbivirus segment 1, complete sequence. NC_007657 Yunnan orbivirus segment 2, complete sequence. NC_007658 Yunnan orbivirus segment 3, complete sequence. NC_007659 Yunnan orbivirus segment 4, complete sequence. NC_007660 Yunnan orbivirus segment 5, complete sequence. NC_007661 Yunnan orbivirus segment 6, complete sequence. NC_007662 Yunnan orbivirus segment 7, complete sequence. NC_007663 Yunnan orbivirus segment 8, complete sequence. NC_007664 Yunnan orbivirus segment 9, complete sequence. NC_007665 Yunnan orbivirus segment 10, complete sequence.
Evidence	Literature
Reference	PMID: 16298988
Authors	Attoui H, Mohd Jaafar F, Belhouchet M, Aldrovandi N, Tao S, Chen B, Liang G, Tesh RB, de Micco P, de Lamballerie X
Title	Yunnan orbivirus, a new orbivirus species isolated from Culex tritaeniorhynchus mosquitoes in China.
Journal	J Gen Virol. 2005 Dec;86(Pt 12):3409-17.
DBLINKS	KEGG BRITE: NC_007656 NC_007657 NC_007658 NC_007659 NC_007660 NC_007661 NC_007662 NC_007663 NC_007664 NC_007665 ICTV: 202004899 ViralZone: family, genus

Scientific Name	Zegla virus [TAX:2303488]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Peribunyaviridae; Orthobunyavirus; Zegla orthobunyavirus
RefSeq	NC_043686 Zegla virus isolate BT5012 segment S NSs and nucleocapsid genes, complete cds. NC_043687 Zegla virus isolate BT5012 segment L RNA-dependent RNA polymerase gene, complete cds. NC_043688 Zegla virus isolate BT5012 segment M glycoprotein precursor, gene, complete cds.
Evidence	Literature
Reference	PMID: 5949345
Authors	Srihongse S, Galindo P, Grayson MA
Title	Isolation of group C arboviruses in Panama including two new members, Patois and Zegla.
Journal	Am J Trop Med Hyg. 1966 May;15(3):379-84.
DBLINKS	KEGG BRITE: NC_043686 NC_043687 NC_043688 ViralZone: family, genus

Scientific Name	Zika virus [TAX:64320]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Flavivirus
RefSeq	NC_012532 Zika virus, complete genome.
DISEASE	H01553 Zika fever; Zika virus disease
Evidence	Literature
Reference	PMID: 19788800
Authors	Hayes EB
Title	Zika virus outside Africa.
Journal	Emerg Infect Dis. 2009 Sep;15(9):1347-50.
DBLINKS	KEGG BRITE: NC_012532 KEGG GENOME: T40049 ICTV: 202003123 ViralZone: family, genus