KEGG   Aureococcus anophagefferens: AURANDRAFT_24989
Entry
AURANDRAFT_24989  CDS       T04134                                 
Name
(RefSeq) hypothetical protein
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
aaf  Aureococcus anophagefferens
Pathway
aaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURANDRAFT_24989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aaf03041]
    AURANDRAFT_24989
   03009 Ribosome biogenesis [BR:aaf03009]
    AURANDRAFT_24989
Enzymes [BR:aaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AURANDRAFT_24989
Spliceosome [BR:aaf03041]
 Complex A
  U1 snRNP components
   U1 related factors
    AURANDRAFT_24989
 Complex B
    AURANDRAFT_24989
Ribosome biogenesis [BR:aaf03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    AURANDRAFT_24989
SSDB
Motif
Pfam: DEAD Helicase_C Sigma70_r3 ERCC3_RAD25_C ResIII
Other DBs
NCBI-GeneID: 20219990
NCBI-ProteinID: XP_009036143
JGI: Auran1_24989
UniProt: F0Y7H5
Position
Unknown
AA seq 495 aa
MGVVKDAKIARKCAKKLLAKLGREPTQAEIAKAVEKKKAKKGKAAPDAAAHGDATPTAAA
PPPASASGAAYLAEHAVACTRDGAPAAAVEPVVAFAGAAALFGGDVAARLGAAFAAPTPV
QAVAWPAACGGGDVVALAKTGSGKTLAYLLPAFRAAAAAPAGSLAVVVLAPTRELAIQIG
ADAAAWGGRMETVVVYGGADRRGQQRELRAKRPSCVVATPGRLKDFVDDRSLDLAAVACV
VLDEADRMLDMGFEPQLAAIVDAMDGGADVERQTLFFSATWPAGVRKLASKYARGAAGPP
LVVSIGGALGDGDGSGLRANAAIGQSFFKLDDSEKDEQLAKLIDGMADSDRMICFTNTKR
RVDYLAKSLWADGFGASAIHGGRSQAEREEALRKFKTNEWPLMFATDVAARGLDLPDVSV
VVNFDMPRDVEQYVHRIGRTGRAGKSGRSVTFWNPAYDTECAGALAKIARDAGQPVPDWL
DAVAAKGKAGKNWAV
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgggcgtcgtcaaggacgccaagatcgcgcgcaagtgcgcgaagaagctgctggcgaag
ctcggacgtgagccgacgcaggcggagatcgcgaaagccgtggagaagaagaaggcgaag
aagggcaaagcagcgccggacgcggcggcgcacggcgacgccacgccgaccgccgcggcg
ccgccgccggcgtcggcgtccggcgcggcctacctcgcggagcacgccgtcgcgtgcacg
cgcgacggcgcgccggccgcggccgtcgagcccgtcgtcgcgttcgccggcgccgcggcc
ctcttcggcggcgacgtcgcggcgcggctcggcgcggccttcgccgcgccgacgcccgtg
caggccgtggcctggcccgcggcgtgcggcggcggcgacgtcgtcgcgctcgcgaagacg
ggcagcggcaagacgctcgcgtacctgctgcccgcgttccgcgcggcggccgcggcgcct
gccgggtccctggccgtcgtcgtgctcgcgccgacgcgcgagctcgcgatccagatcggc
gccgacgcggcggcctggggcgggcggatggagaccgtcgtcgtctacggcggcgcggac
cggcgggggcagcagcgggagctccgggcgaagcggccgtcctgcgtcgtcgcgacgccg
gggcggttgaaggacttcgtcgacgaccggtcgctggacctggccgccgtggcctgcgtc
gtcctcgacgaggcggaccgcatgctcgacatgggcttcgagccgcagctcgcggcgatc
gtcgacgccatggacgggggcgccgacgtcgagcgccagacgctcttcttctccgcgacc
tggcccgcgggcgtgcgcaagctcgcgtcgaagtacgcccggggcgcggccgggccgccg
ctcgtcgtgtccatcggcggcgcgctgggcgacggcgacggctcgggcctccgcgcgaac
gcggcgatcggccagtccttcttcaagctcgacgactcggagaaggacgagcagctcgcg
aagctcatcgacggcatggccgacagcgaccgcatgatctgcttcacgaacacgaagcgc
cgcgtcgactacctcgcgaagtcgctctgggccgacggcttcggcgcgtcggccatccac
ggcggccggtcccaggcggagcgcgaggaggcgctgcgcaagttcaagaccaacgagtgg
cccctcatgttcgccacggacgtcgccgcgcgcggcctcgacctgccggacgtgtccgtc
gtcgtcaacttcgacatgccgcgcgacgtggagcagtacgtccaccgcatcggccgcacg
ggccgcgcgggcaagtcgggccgctccgtgaccttctggaacccggcctacgacacggag
tgcgccggcgcgctcgcgaagatcgccagggacgcgggccagcccgtgcccgactggctc
gacgccgtcgccgccaagggcaaggcgggcaagaactgggccgtttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (244)   
   KEGG ORTHOLOGY (1)   
   RefGene (239)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (259)   

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