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KEGG - Table of Contents


KEGG2 PATHWAY BRITE MODULE KO GENOME GENES LIGAND DISEASE DRUG DBGET
 
Search for

Category Entry Point Search & Compute DBGET Search

Systems
information
KEGG PATHWAY
KEGG BRITE
KEGG MODULE
KEGG Mapper
KEGG Atlas
Update history
Update history


 
Search Pathway
Search Brite
Reconstruct Module
Map Taxonomy
KEGG reaction modules
PATHWAY
BRITE
MODULE

Genomic
information
KEGG ORTHOLOGY KO system ORTHOLOGY

KEGG GENOME
KEGG GENES
KEGG Organisms
New organisms
Release history
SSDB search
OC viewer
BLAST / FASTA
KAAS
GENOME
GENES
DGENES
MGENOME
MGENES

Chemical
information
KEGG LIGAND
KEGG COMPOUND
KEGG GLYCAN
KEGG REACTION
SIMCOMP / SUBCOMP
KCaM
PathComp
PathSearch
PathPred
E-zyme
COMPOUND
GLYCAN
REACTION
RPAIR
RCLASS
ENZYME

Health
information
KEGG DISEASE
KEGG DRUG
KEGG ENVIRON
KEGG MEDICUS
MEDICUS search
Drug interaction checker
Human diseases
Infectious diseases
ATC drug classification
DISEASE
DRUG
ENVIRON

KEGG is developed by Kanehisa Laboratories. See Kanehisa et al. (2014) for updates of KEGG.
† Developed and maintained by Kyoto University Bioinformatics Center as part of its GenomeNet service.

yellow KEGG for specific organisms

KEGG Organisms - the list of currently available organisms
 
Select    (examples) hsa  mmu  sce  eco  bsu  syn
 
KEGG Pangenomes - the list of pangenomes defined from KEGG organisms

yellow KEGG mapping for genome comparsion and combination

Enter organism codes:
 
(examples)   hsa eco (genome comparison)
hsa+T30003 (genome and metagenome combination)
Enter category name:
 
(examples)   Vertebrates (category name in KEGG organisms)
Escherichia coli (species name in KEGG pangenomes)

yellow KEGG for software development

KEGG API - REST-style API for accessing KEGG database [document]
KEGG WebLinks - REST-style URLs for accessing KEGG web pages [document]
KGML - XML representation of KEGG pathways [document]

The following resources are developed and maintained by Kyoto University Bioinformatics Center as part of its GenomeNet service.

yellow KEGG database extensions

KEGG MGENES / MGENOME - Metagenome data
KEGG EXPRESSION - Gene expression data
KEGG OC - Computationally generated ortholog clusters

yellow KEGG as an integrated web resource

DBGET - for keyword search of KEGG and other databases
LinkDB - for searching outside databases linked from KEGG [list of outside databases]

yellow KEGG for computational analysis

BLAST / FASTA - Sequence similarity search
KAAS - KEGG automatic annotation server
GENIES - Gene network prediction
SIMCOMP / SUBCOMP - Chemical structure similarity search
KCaM - Glycan structure similarity search
PathPred / PathComp / PathSearch - Metabolic pathway prediction/computation/search
E-zyme - Enzymatic reaction prediction

Last updated: April 1, 2014
KEGG GenomeNet Kanehisa Laboratories