KEGG   Aminobacter aminovorans: AA2016_4395
Entry
AA2016_4395       CDS       T04343                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
aak  Aminobacter aminovorans
Pathway
aak03420  Nucleotide excision repair
aak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AA2016_4395
   03430 Mismatch repair
    AA2016_4395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aak03400]
    AA2016_4395
Enzymes [BR:aak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AA2016_4395
DNA repair and recombination proteins [BR:aak03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AA2016_4395
   MMR (mismatch excision repair)
    Other MMR factors
     AA2016_4395
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 DUF87 AAA_11
Other DBs
NCBI-ProteinID: AMS43307
Position
4493775..4495955
AA seq 726 aa
MLTQGQWRVATAGLGPPHRRRPVANETETMLHAGMNIALRDSAAEPGYLARLNPGQRAAV
LHGDGAVSRPLLIIAGAGSGKTNTLAHRVAHLIVRGADPRRILLMTFSRRAAAEMSRRVE
RIAADVLQERAASLMEGLSWAGTFHSVGARLLRDYALDIGLEPAFTIHDREDSADLMNLV
RHQLGFSETEKRFPTKATCLAIYSRVVNSQDRLEAVLGHAFPWCVGWSDELKALFKAYVE
AKQAQNILDYDDLLLYWAQMAAEPDIAAHLSQRFDHILVDEYQDTNRLQAAILTAIKPDG
RGLTVVGDDAQSIYSFRAAEVRNILDFPGLFAEPAQVVTLDQNYRSTDAILNAANAVIGE
AEERFTKNLWTERTSLEKPRIVTVADEAEQAGYVCDEVLKEREAGTLLKEQAVLFRAAHH
SGPLEVELTRRNIPFVKFGGLKFLDAAHVKDVLAILRFAQNPRDRIAGFRVMQLMPGVGP
SAASNAIDSMEQSLDLEMGLARFSPPARAAADWPGFVALFSDLRRGPGWPAEMERARLWY
EPHLERKHEDATTRRADLLQLEQIASGYPSRERFLTELTLDPPSATSDEAGPPHLDEDYL
ILSTIHSAKGQEWTKVFVLNAVDGCMPIDLSAGERKELEEERRLLYVAMTRAKDALHLIT
PQRFYTSGQAARGDRHVYASRSRFIAQHLLTHFEATTWTSQSFQKDKATRPRTSVDIKGK
MRSMWT
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgctaacgcaagggcaatggcgcgtagcgaccgcaggcctcggcccgccgcatcgacgc
cggccggttgcgaacgaaacggaaacgatgcttcatgccggcatgaacatcgccctccgt
gattcggcagcagagcccggttatctcgcccgcctgaacccgggccagcgcgcggccgtc
ctgcatggcgacggcgcggtctcacgcccgttgctgatcattgccggcgccggctcgggc
aagaccaacacgctcgcccaccgggtcgcccatctcatcgttcgtggcgccgacccaagg
cgcattctgctgatgacattttcgcgccgggccgcggccgagatgtccaggcgcgtcgag
cgcatcgccgccgacgtgctgcaggagcgcgcggcaagcctgatggaagggctgagctgg
gccggcaccttccattccgtcggtgcgcgattgctgcgcgactatgcgctcgacatcggg
ctggagccggccttcaccatccatgaccgcgaagactcggccgacctgatgaacctggtt
cgccaccagctcggcttttccgagacggagaagcggtttcctaccaaggcgacctgcctt
gccatctattcccgtgtcgtcaattcccaggacaggctcgaggcggtgctcggccacgcc
tttccctggtgcgtcggctggagcgacgagctgaaggcgctgtttaaggcctatgtcgag
gccaagcaggcgcagaacatcctcgactacgacgacctcctgctctactgggcgcagatg
gccgccgagcctgacatcgccgcccatctttcccagcgtttcgaccatatcctcgtcgac
gaataccaggacaccaaccggctgcaggcggcgatcctgacggcgatcaagcccgacggc
cgcggcctgacggtggtcggcgacgacgcccagtcgatctattcgttccgcgccgccgaa
gtgcgcaacatcctcgatttccccggcctgtttgccgaacctgcccaggtggtgacgctc
gaccagaactatcgctcgaccgacgccatattgaacgccgccaatgccgtcatcggcgag
gccgaggagcgtttcaccaagaacctgtggaccgaacggacgtcgctggaaaagccccgc
atcgtgacggttgcagacgaggccgaacaggccggctatgtctgcgacgaggtcttgaag
gagcgcgaggccggcacgcttttgaaggagcaggcggtgctgtttcgggcagcgcatcat
tcggggccgctcgaggtcgagctcaccaggcgcaacatccccttcgtcaagttcggcggg
ctgaagtttctcgatgccgcccatgtcaaggacgtgctggccatcctgcgctttgcccag
aacccgcgcgaccgcatcgccggcttccgggtgatgcagctgatgccgggcgtcggcccg
tcggcggcgtcgaacgccatcgacagcatggagcagtcgctcgacctcgaaatggggctg
gcgcgcttctccccgccggcccgggcagccgccgactggcccggttttgtcgcgctgttt
tcagacctccggcgcggccccggctggccggccgagatggagcgggcgcggctctggtac
gagccgcatctcgagcgcaagcacgaggatgcgacgacacggcgggccgacctgctgcag
ctcgaacagatcgcctcgggttatcccagccgcgagcgtttcctcaccgagctgacgctc
gacccgccctcggcgaccagcgacgaggccgggccgccgcatctcgacgaggattatctc
atcctgtcgacgatccattcggccaagggccaggagtggaccaaggtgttcgtcttgaat
gccgtcgacggctgcatgccgatcgacctcagcgccggcgagcgcaaggagctcgaggaa
gaacgccggctgctttatgtcgccatgacaagggccaaggatgcgctgcacctgatcacg
ccgcagcgtttctacacctccggccaggcggcgcgcggcgacaggcacgtctatgcctcg
cgcagccgcttcattgcgcagcatctgcttacccatttcgaggcgaccacctggaccagc
cagtcgttccagaaggacaaggcgacgcggccgcgcacctcggtcgacatcaagggcaag
atgcgctcgatgtggacgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system