KEGG T03220: EP13

Alteromonas australica H 17: EP13_09265

Entry

EP13_09265        CDS       T03220

Name

(GenBank) DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

aal Alteromonas australica H 17

Brite

KEGG Orthology (KO) [BR:aal00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aal03032]
    EP13_09265
   03400 DNA repair and recombination proteins [BR:aal03400]
    EP13_09265
Enzymes [BR:aal01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     EP13_09265
DNA replication proteins [BR:aal03032]
Prokaryotic type
  DNA Topoisomerases
   EP13_09265
DNA repair and recombination proteins [BR:aal03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EP13_09265

SSDB

Motif

Pfam:

Topoisom_I Top1B_N_bact MRP-L28

Other DBs

NCBI-ProteinID:

AIF98852

UniProt:

A0A075P6D1

Position

2046740..2047837

AA seq 365 aa
MAVAERINAKALRTSTKKIKSTEPRKQFQLTDEMDLTIKRYRCGKSGFYYKYASGRKVTS
KRVLNRISRLVIPPNWQHVQINKVETARIQAVGVDAKERRQYLYHPKWHQQQQAKKFARL
HEFGRAIKAFREACISLLSEEEWTQSRACALVCLLLDCTGVRIGNSQYCKENNTFGLTTL
RRKHIKKACADSVTLNYVGKHKINRVVTVDDPQLAAWIQESAQAVGYSLFRYVDNNNEWH
DVTSDDVNSFIHQYLGDGFSCKDFRTWAASRYALKCLPQVSRMLKENKQRKWQPTLSKCV
AKMLGNTPKVCQEYYLHPKLYEVLACPKTREKVEKKVTQVHEQFCSEYEQCIKLESLLMD
IISSE

NT seq 1098 nt +upstreamnt +downstreamnt
atggcagtggctgaaagaataaacgcgaaggcgttacgaacatcaacaaagaaaatcaaa
agcaccgaacctcgaaaacagtttcagctaactgacgaaatggatttgacgattaaacgt
taccgctgtgggaagtccgggttttactacaagtacgcatcgggaaggaaagtcacgagt
aaacgtgttttaaatagaatttcccgcctcgtgatcccgccaaactggcagcacgtgcag
attaacaaggtagaaactgcacgtattcaagcggtaggtgtagacgcgaaagaaaggcgg
caatatctctatcaccctaaatggcatcaacagcagcaagcgaaaaagtttgcgcgcttg
catgaatttggacgcgccattaaagcgtttcgcgaagcatgtatatcgctattatcggaa
gaagaatggacgcagtctcgtgcctgtgcgctggtgtgtctgttgcttgactgcacaggc
gttcgcatcggaaatagtcagtactgcaaagaaaacaatacctttgggttaaccaccctg
cggcgaaagcacattaaaaaggcatgtgcagatagcgtaacattgaattatgtgggcaag
cataagataaatcgcgtggtaacggttgatgaccctcaattggctgcatggatacaagag
agtgcacaagccgtaggatacagcttgtttcgttatgtagataacaacaacgaatggcat
gatgttaccagtgacgacgtgaacagttttatacatcaatacttaggtgatggttttagt
tgtaaggactttagaacgtgggcggccagtcgttatgcgctgaagtgcttaccgcaagtg
agcaggatgcttaaagaaaacaaacaaaggaaatggcagcccacattaagcaagtgtgta
gcaaaaatgctggggaatacgcctaaagtttgccaagaatattaccttcaccccaagctt
tatgaggttctagcctgccccaaaacgcgtgaaaaagtagaaaaaaaggtcacgcaagtg
catgagcaattttgtagcgaatatgaacagtgtatcaagctagaaagccttcttatggat
attatttcttctgaatga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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