KEGG   Acinetobacter baumannii BJAB0715: BJAB0715_03395
Entry
BJAB0715_03395    CDS       T02727                                 
Name
(GenBank) Exoribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
abab  Acinetobacter baumannii BJAB0715
Pathway
abab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BJAB0715_03395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abab03019]
    BJAB0715_03395
   03016 Transfer RNA biogenesis [BR:abab03016]
    BJAB0715_03395
Enzymes [BR:abab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BJAB0715_03395
Messenger RNA biogenesis [BR:abab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BJAB0715_03395
Transfer RNA biogenesis [BR:abab03016]
 Prokaryotic type
  tRNA degradation factors
   BJAB0715_03395
SSDB
Motif
Pfam: RNB CSD2 S1 OB_RNB
Other DBs
NCBI-ProteinID: AGQ08041
UniProt: A0AA86DRC6
Position
3540396..3542813
AA seq 805 aa
MTKNWVDPEAKAEAERYDNPIPSRTLILDTLEQLQTPQSHAELVDHFHIQDQKSIEALSH
RLSAMVRDGQLMKDGFKFQLVADQPTYEATVYINSKGLGTAHIDGQDDLLLPERELRLVF
NGDRVRVRQTSVDRKGKPWGFITEVIQHRVKQLIGKLSVHDGEYFIQPNNPNQHQPIPLE
KELVEHAKANVGDMLRVAIDTYPTREEFATAHIIQSMADKADTEIIIPQTILEFGLPYEF
PDEVIKEAESFKEPAEQDREGRVDLRDLALVTIDGEDARDFDDAVYAEKRPGGGYRVVVA
IADVSHYVRLDSALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLK
LSRTGRVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPKDRDIHKSLNTLFQLYQILK
NLRVDRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEYALEHD
IPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQKVIEATKDRIDAPSIHAVLL
RSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKQKPYPLSGAALDD
AGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFIGIVSAVTEFGLFVTLKDLYVDGM
IHISQLGDDFFIYDQASQNLIGQNRGQVFGLGDEVKIQVAGVNLEERKIDFQLIKQITHA
GRVVRSRAPRTTKTSTQATEEVFGKPSVSTDGEKPVRKKKEKGKPSSYSKKSGKKTSTKA
EAKPEKVKKKAKPKKKKSNAKSKAD
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgacaaaaaactgggttgaccccgaagcaaaagccgaagctgaacgttatgacaatcct
attccaagccgtactcttattttagatacgttggaacaattgcaaacaccgcaatctcat
gcagaacttgttgaccattttcatattcaagatcagaaaagtattgaagccttaagtcat
cgcttaagtgctatggttcgtgatggccaacttatgaaggatggttttaagtttcagttg
gtggcagaccaacctacctatgaagcaactgtctatattaatagtaaaggtttgggtaca
gcacatattgatggtcaagatgatttgttattacctgagcgtgagttacgtttagtcttt
aatggtgatcgggtccgtgttcggcagacatcggtagatcgcaaaggtaaaccgtggggt
ttcattaccgaagttatacagcatcgtgtaaaacagttaattggtaaattgtcggtacat
gacggcgaatattttattcagcccaacaatccaaatcagcatcaacctatcccactagaa
aaagaattggttgaacatgctaaagcaaatgtcggcgatatgcttcgtgttgctatagac
acttacccaacccgggaagaatttgcaacggcacatattattcaatctatggcggataaa
gccgatactgaaattattattccacaaaccattttagagtttggtttgccttacgaattt
ccagatgaagttataaaagaagctgaaagtttcaaagaacctgctgaacaagatcgcgaa
ggtcgagttgatttaagagacttggcacttgtcacaatcgatggtgaagatgcgcgagat
ttcgatgatgcagtatatgcggaaaaacgtcctggtggtggttaccgagttgtcgttgca
attgccgatgtgagtcattatgtacgattagattcggcattaaatgaagaagctgaagag
cgcggcacttcggtttatttcccacattttgttttaccaatgctaccagaagcattatca
aatggattgtgttcacttaacccacacgtagatcgtttatgcatggtctgtgacctaaaa
ctttctcgtacgggtcgtgttacaggttatgaattttatccggcagtcatgcattcaaaa
gcacgtttgacctatacacaagtaggacaatattttgaaggtgcaactgatgcaattcca
aaagatcgtgatattcataaatcgctaaatacacttttccagctttaccagattttgaaa
aacttacgtgttgatcgtcatgcaatggagtttgaaaccattgaaacttatatgaccttt
gacgagttaggtggaattaaagaaattttacctcgtacacgtaacgatgctcataagctt
attgaagagtgtatgttgcttgccaatgtagcagcagcagaatatgccttagaacatgat
attccgatgttgtatcgtgtacatgaagcacctgaattctcacgtattcaaaaagtaaaa
gattttgtaaaactattgggtttacctttccctgaccaaccaactcaggcagattatcaa
aaagttattgaggcaactaaagaccgtattgatgcgccaagcattcacgccgtgttatta
cgctcaatgatgcaagcttactatggtgccaaaaatgcaggtcactatggtctagcttat
gaagcttatacacatttcacttcaccaattcgccgctacccggacttattgttacatcgt
gcaattaaagctcatctaaaacaaaagccttacccactttccggtgcagctttagatgat
gcaggtgaacatttctctcaaacagaacgccgtgccgatgaagcatcccgcagcgtaacg
acttggttgaaatgtcactatatgcaacaacatttaggtgatgagttcattggtattgtg
agtgcagtaactgaatttggcctatttgttactcttaaagatctttatgttgatggcatg
attcacattagccaacttggcgatgatttctttatttacgatcaagccagtcaaaacctc
attggacaaaatcgtggtcaagtcttcggtttaggcgacgaagttaaaattcaagttgct
ggtgtaaatctagaagagcgtaaaatcgatttccaactcattaaacaaattactcatgct
ggacgtgtagttcgtagtcgtgctccacgcacaaccaaaactagcacacaagcaacagaa
gaagtttttggtaaaccgtctgtatcaactgatggtgaaaaacctgtccgtaaaaagaag
gaaaaaggcaaaccaagctcatatagtaaaaagtctggtaagaaaacctctacaaaagca
gaggctaaaccagaaaaagtaaagaaaaaagcgaaacctaaaaagaaaaagtcaaacgcc
aagtctaaggctgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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