KEGG   Luteitalea pratensis: LuPra_05825
Entry
LuPra_05825       CDS       T04394                                 
Symbol
rluD_3
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
abac  Luteitalea pratensis
Brite
KEGG Orthology (KO) [BR:abac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:abac03009]
    LuPra_05825 (rluD_3)
Enzymes [BR:abac01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     LuPra_05825 (rluD_3)
Ribosome biogenesis [BR:abac03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LuPra_05825 (rluD_3)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 DUF1062 DUF1269
Other DBs
NCBI-ProteinID: AMY12548
UniProt: A0A143PWG3
Position
6890196..6891266
AA seq 356 aa
MHEFDEDDEFDPDDAIGDATEGGRTVSVEIGEDEANQRADQALAALLAGLSRSQVQRLIK
EGQVRVGAAVDAEGEPPGRVLTKASEVLPPGTVLSVTLPEPVASEAAPEDIPLDILFEDE
QLIVVNKAAGMVVHPAAGHATGTLVNALLHHVQDLSGVGGTLRPGIVHRLDKGTSGVMVV
AKNDVAHAELARQFHDREVEKEYVALVWGLVHSGRRIEAPIGRDQHSRQKMTTRARRARS
AVTRVTWALHLPGVSLIRVAIHTGRTHQIRVHLSSVGHAICGDATYGGIPRRIAPHLKAL
SSLQRPFLHAERLVFMHPTERRRMEFEAPLPEDLHHVLEQLDAAVARFGYKTLQNP
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcacgagttcgacgaggacgacgaattcgatcccgacgacgcaatcggcgacgccacg
gaaggcggacgaacggtctcggtggagatcggcgaggacgaggccaatcagcgcgccgac
caggcccttgccgcgctgctcgcgggtctgtcgcgatcgcaggtgcagcggctgatcaag
gaggggcaggtgcgcgtcggcgcggcggtcgatgcggagggagaaccgccgggacgggtc
ctcaccaaggccagcgaggtgctgccgcccggaacagtgctcagcgtgacgctgccggag
cccgtggcctccgaagccgcgccagaggacatcccgctcgacatcctgttcgaggacgag
caactgattgtcgtcaacaaggccgcgggcatggtcgtgcacccggcagcgggacacgcg
accggcacgctcgtgaatgccttgctgcaccacgtgcaggacctcagcggcgtcggcggg
accctgcgtccgggcatcgtgcaccggctcgacaagggcacgtcgggcgtgatggtggtt
gcgaagaacgatgtggcccatgcggaactggcgcgccagttccacgaccgcgaagtcgag
aaggagtacgtcgcgctggtgtggggactcgtccacagcggccgtcgcatcgaggcgcca
atcgggcgcgaccagcactcgcggcagaagatgacgacacgggcgcggcgtgccaggtcc
gccgtgacgcgcgtcacgtgggcgctgcacctgccgggcgtctcgctcattcgcgtggcc
atccataccggccgcacgcaccagatccgcgtgcatctcagctcggtcggacacgcgatc
tgtggcgatgccacgtatggcgggatcccgcggcgcattgcgccgcacctgaaggcgctg
tcgtcgctgcagcggcccttcctgcacgccgagcggctcgtcttcatgcaccccacggag
cggcggcgcatggagttcgaggcgccgttgcccgaggatctgcatcacgtgctcgagcag
ctcgacgccgccgtcgcacgcttcggctacaagacgctgcagaacccgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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