KEGG   Acinetobacter baumannii LAC-4: ABLAC_33910
Entry
ABLAC_33910       CDS       T03519                                 
Name
(GenBank) ribonuclease E/G family protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
abal  Acinetobacter baumannii LAC-4
Pathway
abal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABLAC_33910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abal03019]
    ABLAC_33910
   03009 Ribosome biogenesis [BR:abal03009]
    ABLAC_33910
Enzymes [BR:abal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     ABLAC_33910
Messenger RNA biogenesis [BR:abal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABLAC_33910
Ribosome biogenesis [BR:abal03009]
 Prokaryotic type
  rRNA processing factors
   ABLAC_33910
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AIY38746
Position
3528213..3531545
AA seq 1110 aa
MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANSYFQADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNVPRGMSVIVRTAGIGRTQEELQL
DLQHLLDLWAQIQGTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY
EIAYNPDGFAPSSYERTEATRSSEKELGYESSEWHLEEADHGHAHVTATASTHAAAQKKA
NHATQPVAQPSAQKAASPCAWLENLFVQKQAQTVDQSRSAQNAAAAIEQMVNTGAVSRGQ
FGQVAVPAVAEVAPVQSNNAYISQSPVKQDVREHVEKDDKSQQQRQNNKKRKHKEQREQH
HQSHEQQHQVHEEVVQLSRQEQRELKRQQKRQQQQDQQHQNNDVQHTENAVPRRDRNNQQ
RPNRPNRHRDPSVLNENQNTPVVVDEKQIKVDVIDAPKHDVMNTALIINVDQGQSEIVAL
TPERRHVERVETTSTEVAQEPTPAPVVAEKAAVVETKEEAQPSQEAAQPQIKRASNDPRM
RRRQQREAKHAKAATPSIAPSQIPTLAQHTIGSLIRHVYGEDCTVLIEQFGLVPTFNRAL
QKFAEQYASTLVVEVTAETEEKKPVTRDAELPSHKPAEEAEPAPVLPLTPPQAPAPRVAN
DPRERRRLAKLAAEQAFEQVKQQHSAQEEVATPAPVAEETVAAPTAETQATVEPAQQPLE
LNQSTEVVQPEAAPAEEKATEETVAEAPAAKEPAPSKAASKAKAAAEETVAPTEATTDAE
SEDVKADKDKPSRPRRPRGRPPKKANPVAE
NT seq 3333 nt   +upstreamnt  +downstreamnt
atgaaacgtatgttgattaatgcaactcatgccgaagaagttcgcgttgcacttatcact
ggtaatcgtctttacgattttgatttagagaatcgtacccgagaacagaaaaaatccaat
atctataaaggccatgtcacccgcgtagaaccatctttagaagctgtttttgttgaatat
ggcgcaggtcgtcaaggcttcttgtctatgcgtgaaattgcgaacagctattttcaggca
gacccacgtcaaacttcaaacattcgtgaacttattactgaaggcacagagcttttagtt
caggttgaaaaagaagaacgtggtaataaaggtgcagcactttctacgtttatttccctt
gcaggccgttatttagttcttatgccaaataacccgaaaggtggtggcattagccgtcaa
atttcaggttcagtacgtgaagaattaaaagaaattttagcttctttaaatgtacctcgt
ggtatgagcgtgattgttcgtactgccggtattgggcgtactcaagaagaattacagctc
gatttacaacacttgcttgacctttgggcacaaatccaaggtacagcgagctcaggccct
tctccgatgcttgttcatcaagaagcgggtgtagtaacacgtgcaattcgtgattactta
cgtgatgacgttgctgaaatcttaattgatagcgaacaagcttataacgaagcatataac
tttgttaaagcagtgatgcctcgtcaattagacaaattaaaaacttatactttaaacgag
ccattgtttgctcattttggtattgaaagccaaattcaaactgcttatgaacgtgaagta
aaacttccttcaggcggttcaatcgtcattgaccagactgaagctttagtttcaatcgat
attaactctgcgaaatcgactcgcggtcatgatgttgaagaaactgcactgaatactaac
cttgaagcagcagaagaaattgctcgccaactgcgtttacgtgacattggcggtttagtt
gttatcgacttcatcgatatgactaaagaacgcaatcaacgtatggttgaagcaaaactt
cgtgaagcaacacaaagcgatcgtgcccgtatccagttcggtcaattgtctcgttttggc
ttaatggaaatgagccgtcaacgcttacgcccatcgcttgaagaagcaacaggttatgta
tgccctcgctgtcatggtacaggcatggttcgtgatttacgttcgctttctctttcaatt
atgcgtaaagttgaagagattgcactccgcgaacgtcatggtgaagttcaggttgaagtt
ccagttgaaattgcagccttcttgcttaatgaaaaacgccatagtctggtgtatttagag
caaacttctggtgtacgtgtgactgtattaccacacccgcacttagaaactccacattac
gaaattgcatataacccagatggctttgctccatctagctatgaacgtacagaagcaacc
cgttctagcgagaaagagttaggttatgagtcttctgaatggcatttagaagaagcagat
catggccatgctcatgtaactgctacagcttcaactcatgctgcggctcagaaaaaagca
aatcatgcaactcaacctgtagcacaaccttctgctcaaaaagcagcaagcccatgtgca
tggttagaaaacctgtttgttcaaaaacaagcgcaaacagttgatcaatctcgttcagca
caaaatgctgctgctgcgattgagcaaatggtgaatacaggcgcagtaagccgcggacag
ttcggtcaagtagccgtacctgctgttgcagaagttgcgccagttcaatcaaataacgct
tatatttcacagtcacctgtgaaacaagacgttcgcgaacatgttgaaaaggatgataaa
tctcagcaacaacgtcagaacaacaaaaagcgtaaacataaagagcaacgtgaacaacat
caccaatcacatgaacagcaacatcaagttcatgaagaagtggttcaattgtcacgccaa
gaacaacgtgagttaaaacgtcagcaaaaacgtcaacagcagcaagatcagcaacatcaa
aataatgatgtacaacacactgaaaatgctgtgccacgtcgtgaccgtaataatcaacaa
cgtccaaaccgtccaaatcgccaccgcgatccaagtgtattaaatgaaaatcaaaataca
ccggttgttgttgatgaaaaacaaattaaggttgatgtgattgatgcacctaagcatgat
gtcatgaacactgctttaatcatcaatgttgatcaaggtcaaagtgagattgttgcactt
acacctgagcgtcgtcacgttgagcgagttgaaacgacttctactgaagttgctcaagag
ccaactccagctcctgttgtagccgagaaagctgctgtagttgaaaccaaagaagaagct
cagccaagccaagaagctgctcagccacaaatcaaacgtgctagcaatgaccctcgtatg
cgtcgtcgtcagcaacgtgaggctaaacacgctaaggcagctacgccatctattgcgcca
tcgcaaattccaactttggcacaacacacaatcggtagtttaatccgtcatgtgtatggt
gaagattgcaccgtattgattgaacaatttggtctagtcccaacgtttaatcgtgctttg
cagaaatttgcagaacagtacgcaagtacgttagtagttgaagttactgctgaaacggaa
gagaaaaagccggtaactcgtgatgcagaacttccaagccacaaaccggctgaagaagca
gaacctgcaccagtacttccgcttactccgccgcaagcaccagctccacgtgttgcaaat
gacccgcgtgagcgtcgtcgtttagcaaaacttgctgcggaacaagcatttgagcaagtg
aaacaacaacattctgctcaagaagaagttgctactcctgctcctgtagcagaagaaacc
gttgctgctccaactgctgaaacacaagcaacagttgaaccagcacaacaaccgcttgaa
cttaatcagtcaactgaagtcgtacaacctgaagctgctcctgcagaggaaaaagctaca
gaagaaacagtagctgaagctcctgcagcgaaggaaccggcgccatcaaaagcagcaagc
aaagcaaaagcagcggctgaagaaacagtagctccgactgaagcaacaactgatgccgaa
tcagaagacgttaaggcagataaggacaaaccgagccgccctcgtcgccctcgtggccgt
ccgccaaaaaaagctaatcctgtagctgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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