KEGG   Acinetobacter baumannii LAC-4: ABLAC_35000
Entry
ABLAC_35000       CDS       T03519                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
abal  Acinetobacter baumannii LAC-4
Pathway
abal03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:abal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ABLAC_35000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abal03021]
    ABLAC_35000
   03400 DNA repair and recombination proteins [BR:abal03400]
    ABLAC_35000
Enzymes [BR:abal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ABLAC_35000
Transcription machinery [BR:abal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ABLAC_35000
DNA repair and recombination proteins [BR:abal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ABLAC_35000
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RelB DOCK-C2
Other DBs
NCBI-ProteinID: AIY38855
Position
complement(3654254..3658342)
AA seq 1362 aa
MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQDGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDITDNEGKVIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT
AEDITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADLTRDR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDDVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGVIEYVDASRIVIRVNEDEMVAGEAGVDIYNLIKYTRSNQNTCINQNVIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA
QLDSYRKDLKEEYKIFEEAARERVIRLLKGQESNGGGSTKRGDKLSEDLLSGLELVDLLE
IQPADEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDEEILALAGNLRAGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq 4089 nt   +upstreamnt  +downstreamnt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggatgcaccgtacttattatcgattcaggtcgattcgtacagaacattcttgcaa
gatggcaaatcaccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatcgaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aaacctgagttcgatgtacgcgaatgtatccttcgtggctcgacttatgcggcaccaatg
cgcgttaaaattcgtttgattattaaagatcgcgaaactaaatcaattaaagacgtacgc
gaacaagaagtctatatgggtgaaattccactcatgactgaaaatggtacctttgttatc
aacggtactgagcgtgtaatcgtatctcaattacaccgttcgccaggcgtattctttgac
catgataaaggtaagacccactcaagtggtaaagtgttgtattcagcacgtatcattcct
taccgtggttcatggttagacttcgaatttgatgcaaaagacttagtttacgtacgtatc
gaccgtcgtcgtaaattacttgctacagttgtgttacgtgcactaggttataacaatgaa
cagatcttgaatttgttctatgaaaaagtacctgtgtatcttgacatgggtagctatcaa
attgaccttgtacctgagcgtttacgtggtgaaatggctcaatttgatattactgacaat
gaaggtaaagtcattgttgagcaaggtaaacgtattaatgctcgtcacgtacgtcaaatg
gaagctgcaggtttaactaagctttcagttcctgatgaatacttatatgagcgtatcact
gctgaagatattactttacgtgatggtgaagtaattgctgcaaatactctgttaagccat
gaagtaatggtgaaattggcagaaggcggtgttaagcaatttaatatcttgttcactaac
gatattgaccgtggttcattcgtagctgatacattacgtgctgacttgacgcgtgatcgt
gaagaagcattagtagaaatctacaaagtaatgcgtccgggcgagccaccaacaaaagaa
gctgctgaaaacttattcaataacttgttcttctcttctgaacgctatgacttatctcca
gtaggtcgtatgaagttcaaccgtcgtttaggtcgtccttacgaagttggtactgatcag
aagtcacgcgaagttgaaggtattttatcgcacgaagatattatcgatgtattacgtaca
ttggttgaaatccgtaacggtaaaggtgaagtcgacgatatcgaccacttaggtaaccgt
cgtgtacgttctgttggtgaaatgacagagaaccaattccgtgtaggtttagttcgtgtt
gagcgtgctgttaaagagcgtttaagccaagcagaaacagataacttgtctccacaagat
ttgattaatgcaaaaccagttgctgctgcaatcaaagaattctttggttcaagccagtta
tctcagtttatggaccaaaacaacccattatctgagattacacataaacgtcgtgtatct
gcgcttggtcctggtggtttaacacgtgaacgtgcaggcttcgaagtacgtgacgtacac
caaactcactatggtcgtgtttgtccaattgaaactcctgaaggtccaaacattggtttg
atcaactcgctttctgtatacgcaaaagcgaatgacttcggtttcttggaaactccatac
cgcaaagttgtagatggtcgtgtaactgatgatgttgaatatttatctgcaattgaagaa
gtaggtactgttattgcacaggccgactctgcagtagataaagatggcaacttaacagaa
gaattcgtttctgttcgtcatcaaggtgaattcgtacgtatgccgcctgaaaaagtaacg
catatggacgtttctgcacagcaggtagtatctgttgctgcatcacttattccattcctt
gaacacgatgacgcaaaccgtgcgctcatgggttcaaacatgcaacgtcaggcagttcct
actttacgtgcggataaaccgcttgtaggtacaggtatggaagcgaacgttgcacgtgac
tctggtgtgtgtgtaatcgcaaaccgtggcggtgtaattgaatatgtagatgcttctcgt
atcgttattcgtgtaaacgaagatgaaatggttgcaggtgaggcaggtgtagatatctat
aacctcatcaaatatacgcgttcaaaccaaaatacttgtattaaccaaaatgttatcgtg
aacttgggcgacaaagttgctcgtggtgacatcttggcagacggtccgtcaacagacatg
ggtgaacttgcgcttggtcaaaacatgcgtgtagcgttcatgacatggaatggttacaac
tacgaagactcgatcttgttatctgagcgtgtacttcaagaagaccgtttaacctctatt
cacattcaagaattgtcatgtgtagcacgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtaggtgaagctgcgctttctaaacttgatgaatcaggtatcgtt
tatatcggtgctgaagttactgctggtgacatcttagttggtaaagtaacgcctaaaggt
gaaactcagttaactcctgaagaaaaactgcttcgtgcaatttttggtgagaaagcagct
gacgttaaagactcatctttacgtgttccatctggtactaaaggtacagttattgacgtt
caagtcttcactcgtgatggcttagagaaagatgaccgtgctttagcaattgaaaaagca
cagcttgattcttaccgtaaagacttgaaagaagaatacaagatcttcgaagaagcggct
cgtgagcgtgtaattcgtttgcttaaaggccaagagtctaatggcggtggttcaactaaa
cgtggtgataaactttctgaagatttattatctggtttagagcttgttgatttacttgaa
attcaaccagcagatgaagcaatcgctgagcgtttaactcaaattcaagtgttcttgaaa
gagaagagcgcagaaatcgatgagaaattcgctgagaagaaacgtaagcttgcaacaggt
gatgaattaacgactggcgtattaaaagttgttaaggtttacttagctgttaaacgtcgt
attcagcctggtgataagatggctggtcgtcacggtaacaagggtgttgtatctaacatc
ttacctgttgaagacatgccacatgatgctaacggtgtgccggtagatatcgtattgaac
ccgctgggtgtaccatctcgtatgaacgtgggtcagattctagagactcacttgggtatg
gcggctaaagggcttggtgacaaaatcgaaaaaatgttgaaagaacaacgtacagtttta
gaactgcgcgaattcttagacaagatttataacaaagtcggcggtgagcaagaagatctt
gatagcttgactgatgaagaaattctagcgcttgcaggtaacttgcgtgcgggtgtgcct
ttagctactcctgtatttgatggtgctgaagaaagtcaaattaaagacttacttgaattg
gctgacatttcacgtacgggtcaaacagtattgtttgatggacgtacaggtgaacagttt
gaccgtccagtaactgttggttacatgtacatgcttaaattgaaccacttggttgatgac
aagatgcatgcgcgttcaactggttcttactcacttgttacacaacaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacactccaagaaatgctcacagtgaagtcggatgacgttgaaggccgt
actcgcatctataagaacattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactaaaaaat
ggtgactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system