KEGG   Anaerolineaceae bacterium oral taxon 439: BEQ56_08490
Entry
BEQ56_08490       CDS       T04463                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
abao  Anaerolineaceae bacterium oral taxon 439
Pathway
abao03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:abao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BEQ56_08490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abao03021]
    BEQ56_08490
   03400 DNA repair and recombination proteins [BR:abao03400]
    BEQ56_08490
Enzymes [BR:abao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BEQ56_08490
Transcription machinery [BR:abao03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BEQ56_08490
DNA repair and recombination proteins [BR:abao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BEQ56_08490
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C Peptidase_M23 RPOC_hybrid PTH2 XRN_M
Other DBs
NCBI-ProteinID: AOH43510
UniProt: A0A1B3WRE8
Position
1884552..1888856
AA seq 1434 aa
METKGLVALGISLASPEEVLKWSYGEVLKPETINYRRLRPEKDGLFCEAIFGPTRDWQCY
CGKYKNPRYKNIVCEKCGVQVTRASVRRERMGHINLSAPIAHIWYTRRIPSYLGLLLDIS
RRNLDRALYYAQYIVTYVDEEARQKALARLEEEISGSEREYATEFNQKILEIKNYRDQQY
AILKEQRDSLQSQTDEKVAAEIAPIIREGQRIESDLHGRLGSVANDDVLIAQTDTVVVKA
GETITNAHIAAVQKAVKAKLDEIEGSYRGQLQRDFERLDMEKQTLRAEAEEQMEALRNQL
EEISMKSDSTNSKLRDELLDLQPLAFLSEISYRELKSRWGNVFRADMGAEAFMDILRRLD
MDRLSEDLWNEVRTTKSKQKRKKAVSRLKVVESFRASKNKPEWMILSILPVIPPDLRPMV
QLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDVIVRNEKRMLQEAVDSLIDNSQRG
KALSRRGRRELKSLSDMLKGKKGRFRRNLLGKRVDYSGRSVIVVGPKLKLYQCGLPKTMA
LELYHPFLVARLVSEGYASNVKGANRIIERNKPEVLEVLAEVISDHPVLLNRAPTLHRLG
IQAFEPILIEGNAIQLHPLVCTAFNADFDGDQMAVHVPLSEKAVAEARQLMLASKNLLKP
SDGEPIISPSKDMVLGIYYLTMESAHPELGDGRAFFDSDEVKLAYDLSQVSLHAKIKFRT
QTIWNEEKRVVTEAVKTADNQTELIEKEKTFVVRLDSPITRVIETTVGRVLFNEILPEEI
RFKNQTFEKGSIKDLISEVYQTCDQEVTTVTADAIKDIGFEYAMRSGSTISVFDITVPDT
KESLIAKTEQEVNQINKQWRRGLLTEQERDSRTISLWRDTTDMIGSEVKRTMDPQGNMAV
MANSGASKGGFGPISQLAGMRGLMADPSGRIIRLPIKSGFREGLTALEYFISTHGARKGL
ADTALRTADAGYLTRRLVDIAQDLVINDEDCGTSEGITIRRSENAAKQRFAERIYSRVLC
ERVVDDRTGEIIGEKDEHITHEMAERIEKSGVESVHVFSPMTCELKHGICAKCYGLDLSR
GKKVELGTAVGTVAAQSIGEPGTQLTLRTFHSGGVATQSDITSGLPRVEELFEARRTPKG
EAVVAQIEGVATIIQSDKNSDQRVVRIDHSAIAADTFEIPEGWTLAVEDEDTVTAGSVIA
DNGDATITTPHTGQVRIEDNKVIVGYELRETEEYDIPTTAQLEIRDGDYVSAGQPLTKGS
INPHMILRLQGREACANYILSGIQLIYRDQGQMIHNKHFEVIIRKMLGKVQITRSGDSPF
LPMDVVDYLRIRDINRKLEAEGKQPAKYVETLLGVSKASLSTDSWLSASSFQHTIKVLAS
AAIAGAKDPLYGLKENVIIGKLIPAGTGFSQGMFDNEDEYVQNGALIANLPSDE
NT seq 4305 nt   +upstreamnt  +downstreamnt
gtggaaacaaaaggattagttgcattagggatcagtctcgcgtcgccggaagaagttctg
aaatggtcatacggcgaggtcctgaaacccgaaacgattaactatcgccgccttcgaccg
gaaaaggatgggttattttgcgaagcgatcttcggaccgacccgcgattggcagtgttac
tgcggaaagtataagaatccccgctacaaaaatatcgtatgcgaaaaatgcggcgtgcag
gttacgcgcgcgtccgtccgccgcgaacgcatggggcatattaatctctcggcgccgatc
gcgcatatctggtacacgcgccggatcccctcgtatctgggactcctcctcgatatctcg
cgccgcaacctcgaccgcgctttatactatgcgcaatatatcgtgacctacgtcgacgag
gaagcgcgtcagaaagcgttagcccgccttgaggaagaaatctccggttcggaacgcgaa
tacgcgaccgaattcaatcagaagatcctcgaaatcaagaattaccgggatcagcaatac
gccatccttaaagaacagcgcgattcgctccagtcgcagaccgacgaaaaagtcgccgcc
gaaatcgccccgattatccgcgaaggtcagcggatcgagagcgatctccacggacgcctg
gggtcggtcgcaaacgacgacgtcctcatcgcgcagaccgataccgtcgtcgtcaaagcc
ggcgagacgattaccaacgcgcatatcgccgccgtccagaaagcggtcaaggccaaatta
gacgaaatcgaaggcagctaccgcggccagctccagcgcgacttcgaacgcctcgacatg
gaaaagcagacgctccgcgctgaagcggaagagcagatggaagcgcttcgcaaccagctc
gaagaaatctcgatgaaatccgattcgacgaattcgaagctccgagacgaactcctcgat
cttcagccgctggcgttcctaagcgaaatttcgtatcgggaactgaaatcccgatgggga
aacgttttccgcgccgatatgggcgccgaagcgttcatggatatcctccgccgcctcgac
atggaccggctctcggaagacctctggaacgaggtgcggacaacaaagagcaagcagaag
cgcaagaaagccgtctcgcgcctcaaggtcgtcgaatcgttccgcgcgtcaaagaataaa
ccggaatggatgatcctgtcgattctgccggttattccgcccgacctgcgccccatggtc
cagcttgacggcgggcgttttgcaacctccgacctgaacgatctttatcgccgcgtgatc
aaccgcaataaccggctgaaacggctcctcgagctcggtgcgccggacgtcatcgtccgc
aacgaaaagcgcatgctccaggaggccgtcgactcgctcatcgataattcccagcgtggg
aaagcgttatcgcgccgcggccgccgcgagctgaaatcgctctccgacatgctgaaaggg
aagaaaggccgcttccgccgcaacctgctcgggaagcgcgtcgactactccgggcgttcg
gttatcgtcgtcgggccaaaattaaagctctaccaatgcgggctgccgaagacgatggcg
ctcgaactatatcatccgttcctggtcgcgcgcctcgtatccgaaggctacgcttcgaac
gtcaaaggcgcgaaccggattatcgaacgcaataaacccgaagtcctcgaagtcctcgcc
gaagtcatcagcgaccatccggtcctgctgaaccgcgccccaacgctgcaccggctcggg
attcaggcgttcgaaccgatcctgatcgaagggaacgcgatccagctccatccgctcgtt
tgcaccgcgttcaacgccgactttgacggcgaccagatggccgtgcacgttccgctgtcc
gaaaaagcggtcgccgaagccaggcagctgatgctcgcgtcaaagaacctgctgaaaccg
tcggacggcgaaccgattatctcgccgtcgaaagacatggtcctcggcatttactacctg
acgatggaatccgcgcatccggagctcggcgacggccgcgccttcttcgactccgacgaa
gtcaagctggcctacgacctgagccaggtctcgcttcacgccaaaatcaaattccggacg
caaacgatctggaacgaggaaaagcgggtcgttaccgaagcggtcaaaaccgccgacaat
cagaccgaactcatcgaaaaagagaaaacgttcgtcgtccgcctcgacagcccgatcaca
cgggtcattgaaacgacggtcggacgcgtcctcttcaacgaaattctcccggaagagatc
cgattcaagaaccagaccttcgaaaaaggttcgattaaggacctgatttccgaagtttat
caaacctgcgaccaggaggtcacgaccgtaaccgccgacgcgatcaaggacatcggcttc
gaatacgcgatgcgctccggatcgacgatctccgtcttcgatattaccgttccggatacg
aaagaatcgctcatcgccaaaacagagcaggaagtcaaccagatcaataaacaatggcgg
cgcggcctcctcaccgaacaggaacgcgattcccggacgatctccctctggcgcgatacg
accgacatgatcggaagcgaagttaaacgcacgatggatccgcagggcaacatggcggtc
atggccaattccggcgcgtcgaaaggcggcttcggccccatttcgcagctggccggcatg
cgcgggctgatggccgatccgtccggacggattatccgcctcccgattaaatccggtttc
cgcgaaggactgaccgcgctcgaatactttatctcgacgcatggcgcccggaaagggtta
gccgataccgcgctccggaccgccgacgccggctacctgacccgccgtctcgtcgacatc
gcgcaggacctggtcatcaacgatgaagactgcggcacgagcgagggaatcaccatccgc
cgcagcgaaaacgccgcgaaacagcgcttcgccgaacggatctacagccgcgtcctctgc
gaacgcgtcgtcgacgaccggaccggcgaaattatcggcgaaaaagacgagcatatcacg
catgaaatggccgagcggatcgagaaaagcggcgtcgaatcggtccacgttttctcgccg
atgacctgcgagctgaaacatgggatttgcgccaagtgctatgggcttgacctgagccgc
ggaaagaaagtcgaattggggaccgccgtcggaaccgtcgccgcgcagtcgatcggcgaa
ccgggaacgcagttaacgctgcgcacgttccacagcggcggcgtcgcgacccagagcgat
attacctccggtctcccgcgcgtcgaagaactctttgaagcgcgccggacgccgaaaggc
gaagccgtcgtcgcgcagatcgaaggcgtcgcgacgattatccaatcggataaaaattcc
gaccagcgcgtcgtccgcatcgatcattccgctatagccgccgatacgttcgaaattccc
gaaggctggacgctcgcggtcgaggacgaagacacggtgacggccggatccgtgatcgcc
gataacggcgacgcaaccatcaccacgccgcataccggacaggtccggatcgaagacaac
aaagtcatcgtcggatacgagctccgcgaaaccgaagaatacgatatcccgacgacggcg
cagctcgaaatcagggacggcgattacgtttccgcgggccagccgctcacgaagggttcg
atcaacccgcatatgatcctgcggttgcaggggcgggaagcctgcgcgaattatattctc
agcgggattcagctcatctaccgcgatcagggccagatgatccacaataagcatttcgag
gtcattatccgcaagatgctcggcaaggttcagatcacccgatccggagattctccgttc
ctgccgatggacgtcgtcgattacctgcggatccgcgatatcaaccgcaagctcgaagcc
gaaggaaaacagccggcgaaatacgtcgaaacgcttctcggcgtctcgaaagcatcgctc
agcaccgattcatggctgtcggcctcatccttccagcatacgatcaaagtcctcgcctcg
gccgcgatcgccggcgcgaaagacccgctttacgggttgaaagaaaacgtcattatcggg
aagctcatccccgccgggaccggcttctcgcagggcatgttcgataacgaagacgaatat
gtccagaacggcgcgctgatcgccaatttaccgtcggacgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (48)   

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