KEGG   Azospirillum brasilense Sp7: AMK58_06190
Entry
AMK58_06190       CDS       T04566                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
abf  Azospirillum brasilense Sp7
Pathway
abf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMK58_06190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abf03019]
    AMK58_06190
Messenger RNA biogenesis [BR:abf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AMK58_06190
SSDB
Motif
Pfam: Lactamase_B_2 RNase_J_C Lactamase_B RMMBL GGDEF_2
Other DBs
NCBI-ProteinID: ALJ36509
UniProt: A0A0P0FAG2
Position
1353776..1355377
AA seq 533 aa
MNLNLYGHRGKWLMVDLGISFADDTMPGLDVIMPDPAFIAERRHDLVGIVVTHAHEDHLG
AIQYLWPQLRVPVYCTPFTAAVLRAKLHERGLAGVVPVHEVALGSTIEVGPFSVEYVTVT
HSIPEPNALAIRTAAGTVLHTGDWKLDPEPLVGEAADEERLRAIGDEGVLALIGDSTNAL
VPGSSGSEGSVRKTLTELIGQFPDVRVAVSCFATNVARLESIAHAAAAHGRHVALVGRSM
WRINEAARSNGYLADLPAFLTEHDANYVPRDKLVLVCTGSQGEPRSALARIASDDHPQVS
LQRGDVVVFSSREIPGNERAIGRMQNLLVSQGIRIVTADEAPVHVSGHPAQDELVRMYQW
VRPRIAMPVHGEQRHQLEHAKLARACQVPETLVPGNGDLIRLAPDAPPRVVAQVRSGRMA
LDGKRLIPLDTGLMRARHRMVHNGAAVVTLVMNGKGELVTAPQIAVMGLLDDSADRDMLL
DVVDAVREAVAEMPKSARSDDEQVRTAARIAVRRCFNATHGKKPMTDVHLVRV
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgaacctcaacctctacggccatcgcggcaagtggttgatggtggatctcggcatctcc
ttcgcggacgacacgatgccggggctggacgtcatcatgcccgaccccgccttcatcgcg
gagcgccggcacgaccttgtcggcattgtggtgacgcacgcgcacgaggatcacctgggg
gccatccagtatctgtggccgcagctccgcgtgccggtctactgcacgcccttcaccgcc
gccgtgctgcgcgccaagctgcacgagcgcgggctggccggggtggtgccggtccacgag
gtggcgctgggcagcaccatcgaggtcggccccttctccgtagagtatgtgacggtcacc
cactccatccccgagccgaacgccctggcgatccgcaccgccgccggcacggtgctgcac
accggcgactggaagctcgacccagagccgctggtgggagaggcggccgacgaggagcgg
ctgcgagccatcggcgacgagggcgtgctggcgctgatcggcgacagcaccaacgccctg
gtgcccggcagctccgggtcggaaggcagcgtgcgcaagacgctgaccgagttgatcggg
caattccccgacgtgcgcgttgcggtgagctgcttcgccaccaacgtcgcacggctggag
agcatcgcccacgccgcggcggcgcacgggcgccacgtcgctctggtcgggcggtcgatg
tggcggatcaacgaggccgcgcgctccaacggctaccttgccgatctgccggccttcctg
accgagcatgacgccaattacgtgccgcgcgacaagctggtgctggtctgcaccggcagc
cagggggagccgcgctccgcgctcgcccgcatcgcgtcggacgaccatccccaggtgtcg
ctgcagcgcggcgacgtggtggtcttttcctcccgcgaaattccgggcaacgagcgcgcc
atcggccgcatgcagaacctgctggtcagtcagggcatccgcatcgtcaccgccgacgag
gcaccggtccatgtgtccggccacccggctcaggacgaactggtccgcatgtaccagtgg
gtacgcccgcgcatcgccatgccggtccacggcgagcagcgccaccagctggagcacgcc
aagctggcccgcgcctgccaagtgccggagaccttggtccccggcaacggcgacctaatc
cggctggcacccgacgcgccgccgcgggtggtggcgcaggtccgctccggccgcatggcg
ctggacggcaagcggctgattccgctcgacaccgggctgatgcgggcgcgccaccgcatg
gtccacaacggcgccgccgtggtcacgctggtgatgaacgggaagggcgaactggtgacc
gcgccgcagatcgcggtgatggggctgctcgacgactcggcggaccgagacatgctgctc
gacgtggtggacgcggtgcgcgaggccgttgccgagatgccgaagtctgcccgttccgac
gacgagcaggtgcgaaccgccgcccgaatcgccgtccgccgctgcttcaacgcgacgcac
ggcaagaagccgatgacggacgtgcatctggtccgtgtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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