KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT111135
Entry
AGABI1DRAFT111135 CDS       T03136                                 
Symbol
AGABI1DRAFT_111135
Name
(RefSeq) hypothetical protein
  KO
K07936  GTP-binding nuclear protein Ran
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03008  Ribosome biogenesis in eukaryotes
abp03013  Nucleocytoplasmic transport
abp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
   03008 Ribosome biogenesis in eukaryotes
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abp03019]
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
   03009 Ribosome biogenesis [BR:abp03009]
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
   03016 Transfer RNA biogenesis [BR:abp03016]
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
   03036 Chromosome and associated proteins [BR:abp03036]
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:abp04147]
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
   04031 GTP-binding proteins [BR:abp04031]
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
Messenger RNA biogenesis [BR:abp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     AGABI1DRAFT111135 (AGABI1DRAFT_111135)
Ribosome biogenesis [BR:abp03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
  Pre-60S particles
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
Transfer RNA biogenesis [BR:abp03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
Chromosome and associated proteins [BR:abp03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     AGABI1DRAFT111135 (AGABI1DRAFT_111135)
   Spindle formation proteins
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
Exosome [BR:abp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AGABI1DRAFT111135 (AGABI1DRAFT_111135)
GTP-binding proteins [BR:abp04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    AGABI1DRAFT111135 (AGABI1DRAFT_111135)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 G-alpha GTP_EFTU Pox_A32 AAA_16 DUF5118 AAA_7 AAA_24 DUF5906 AAA_33 AAA_22
Other DBs
NCBI-GeneID: 18823184
NCBI-ProteinID: XP_007326519
JGI: Agabi_varbur_1_111135
UniProt: K5Y3K4
Position
Unknown
AA seq 213 aa
MTDTIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFTTNFGNICFNV
WDTAGQEKFGGLRDGYYIQGQCGIIMFDVTSRITYKNVPNWHRDLERVCENIPIVLCGNK
IDVKERKVKTGAVTFHRKKNLQYFEISAKSNYNFEKPFLWLAQKLVGNPRLEFVAAPALA
PAEVAIDANLMKQYEQELKQAEAVPLPEEEDDL
NT seq 642 nt   +upstreamnt  +downstreamnt
atgactgacactatccctactttcaaactcgtcctcgtcggcgacggtggtaccggcaag
actacctttgtcaagcgccacttgactggtgaatttgagaaaaaatacattgccaccctt
ggtgtcgaagttcaccctctgcacttcacaaccaacttcggcaacatctgtttcaacgtc
tgggatacagcgggacaggaaaagttcggcggtttgagggatggttattacatccaaggt
caatgtggaatcattatgtttgatgtcacctcgcgaatcacctacaaaaacgtccccaat
tggcatcgcgatctcgagcgtgtctgtgaaaacatccccattgtcctttgtggtaacaaa
atcgatgtgaaggaacgcaaagtgaagaccggcgctgttaccttccaccgcaagaagaac
ttgcagtatttcgaaatctctgcaaagtcgaactataattttgaaaaacccttcctgtgg
ctcgcacagaaactcgtcggtaatccccgtcttgaatttgttgccgccccagcccttgct
cccgccgaagttgccatagatgccaatctcatgaagcagtatgagcaagaacttaaacag
gcggaagctgttcctcttcctgaggaagaagacgatctctaa

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (41)   

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