KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT114891
Entry
AGABI1DRAFT114891 CDS       T03136                                 
Symbol
AGABI1DRAFT_114891
Name
(RefSeq) hypothetical protein
  KO
K14284  nuclear RNA export factor
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Pathway
abp03008  Ribosome biogenesis in eukaryotes
abp03013  Nucleocytoplasmic transport
abp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:abp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AGABI1DRAFT114891 (AGABI1DRAFT_114891)
   03015 mRNA surveillance pathway
    AGABI1DRAFT114891 (AGABI1DRAFT_114891)
   03008 Ribosome biogenesis in eukaryotes
    AGABI1DRAFT114891 (AGABI1DRAFT_114891)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abp03019]
    AGABI1DRAFT114891 (AGABI1DRAFT_114891)
   03009 Ribosome biogenesis [BR:abp03009]
    AGABI1DRAFT114891 (AGABI1DRAFT_114891)
Messenger RNA biogenesis [BR:abp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     AGABI1DRAFT114891 (AGABI1DRAFT_114891)
   mRNA cycle factors
    Stress granule specific factors
     AGABI1DRAFT114891 (AGABI1DRAFT_114891)
Ribosome biogenesis [BR:abp03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    AGABI1DRAFT114891 (AGABI1DRAFT_114891)
SSDB
Motif
Pfam: TAP_C LRR_4 LRR_9 LRR_8
Other DBs
NCBI-GeneID: 18824508
NCBI-ProteinID: XP_007331409
JGI: Agabi_varbur_1_114891
UniProt: K5XSW2
Position
Unknown
AA seq 591 aa
MFSTSTPASGSRTIASRALRRAGLVDSDTQMRDGDNDRRNAQRSRRRIRGTESAKEQATG
SFHRSLAVRMSASARGTASDPLAIRGAARPTIAGRLRRKDAESGFASNRDGAVDAWRQMV
NARYNPETRFLDLSSMIDDEIVKKHSLSPPGRGGNVRTAAVIFKLAGQLQPEVQTLSLAN
NNLHGMHLLYLDRYLPKLRNLSLEGNDLQTWRDLDHVGAKKDKMKCLRELVLIGTPIRDM
EYKNGRGDRYRSELARRFPALEVLDSETITQIGFTTETDIGQQQSVVPKPSATTFPYEMG
PSFITGVDGNLVSAFLFRFFEFFDTQRNGLLGVYDDQANFSYCCNTSIPVRARIENLHNT
LPNQRRLNWEKWLENSGGGSRNLNRQQVNVDKSVKLLHIGPPSIIAAQTALPETKHDVLG
SMQKFVVDAFPVPHGQGHALLVTLHGEFMEVRKQALRSFDRSFILLPAPEGSRAKLAGWD
VTILSDQLTIRGYSNPNVWKIGPMLVQAEAKSNPAQKPAAFVTSSLPLDQQATLNNLPDE
TQRNLVLQTCARTRLNVNFALDCLHGNAWDLERAITNFEQVKDKLPKDAYL
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgttttctacgtcaacccccgcctctgggtcgaggaccatagcttcaagagcgctacgc
agagctggtctcgtcgactccgacacacaaatgcgtgacggtgacaacgacaggagaaac
gcacaaaggtctcgcagaagaattcgcgggacagaatcagccaaggagcaggccacagga
tcgtttcatcgctcgctcgccgtccgtatgtccgcatctgctcgtggaacagcttccgat
cctctcgcgatacgcggagctgcaagacctactatcgccggacgtctgcggagaaaagac
gcagaatccggtttcgcgtccaatcgtgatggtgctgtcgatgcctggcggcagatggtt
aatgcacgatacaatccggaaactcgctttcttgacctgagttcaatgatcgacgacgaa
atcgtcaagaaacactcgctgtctccgccaggccgtggtggtaatgtccgcacagccgct
gtcatctttaagctggcagggcagcttcagcccgaggttcaaacattatctctcgctaac
aataatttgcatggcatgcatctcctctacctcgaccgatatttgcccaagctccgcaat
ctttctctggagggtaatgacctccaaacttggagagacttggaccatgtcggagcgaag
aaagataagatgaagtgtctgagagaattggtgttaatcggaacgccgatccgtgatatg
gaatataagaatggtcgcggagaccgttaccgaagcgaattggctcgacgcttccctgcg
cttgaagtcttggactctgaaaccatcacgcagatcggctttacgactgagacggacatc
ggccaacaacagtcagtcgttccgaagcccagcgcgacaaccttcccctatgaaatgggg
ccttcattcatcaccggtgttgatggtaatcttgtcagcgcctttttattccggttcttc
gagtttttcgatacccagagaaacgggttgttgggtgtttatgatgatcaagcgaacttc
tcctattgctgcaacaccagcattccagttcgtgcgcgcatagagaacctccataatact
ctacccaatcaaaggaggttgaattgggagaagtggctggagaattcaggcggaggatcc
agaaatctcaatcgtcaacaagtcaatgttgacaaatcggtgaaactcttacacatcgga
cctcctagtatcattgccgcccagaccgcactccccgagacgaagcatgacgtgttaggt
tctatgcagaagttcgttgtggatgcattcccagtaccccacggacagggacatgcgctt
ctggtgacacttcatggcgaattcatggaagtgaggaaacaagccttgcggtcgtttgat
cgatcatttattttgctccctgctcctgaaggctctagagcaaaattagcaggctgggat
gtaactatcttgtcggaccaactgacaatacgaggttactcgaatccaaacgtgtggaag
atagggcctatgttggtacaggctgaggccaaatcgaaccctgctcaaaaaccggcagca
tttgtcacatcatcacttccactcgatcaacaggcaacgttgaacaacctccccgacgaa
acgcagaggaatctggtgcttcagacatgtgcacgaacgaggctgaacgtgaacttcgcc
cttgactgcttgcatggcaatgcctgggatctggaaagagctattacaaactttgaacaa
gtgaaggataaacttccaaaagacgcatatctataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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