KEGG   Aliarcobacter butzleri RM4018: Abu_2199
Entry
Abu_2199          CDS       T00600                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
abu  Aliarcobacter butzleri RM4018
Brite
KEGG Orthology (KO) [BR:abu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abu03016]
    Abu_2199 (truA)
Enzymes [BR:abu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     Abu_2199 (truA)
Transfer RNA biogenesis [BR:abu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Abu_2199 (truA)
 Prokaryotic type
    Abu_2199 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344 U-box Glyco_hydro_28
Other DBs
NCBI-ProteinID: ABV68413
UniProt: A8EWU0
Position
complement(2197689..2198411)
AA seq 240 aa
MNLKFVVAYDGSLFQGSQKQPNGKTVENELLKAFENINIKTQIVLSGRTDKEVHSSGQVF
NCQIPSYWEDFFKLKEILNKNLPTSIKIKKISKVDESFHSRFSAKKRVYRYLITTKETTP
FNDKFITYVKSVDEKLLKKAIKEFIGIHDFKYFHKTGSDKENTNREIFDTKFYKYKDIYV
FKFTANSYLRSQIRLMVGFLLAINDKKLTIEDLRKQLNCEKIIFKTPIKPNGLYLAKIKY
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaacttaaagtttgttgtcgcttatgatggaagtttatttcaaggaagccaaaaacaa
ccaaatggcaaaacagttgaaaatgaacttttaaaggcttttgaaaatataaatattaaa
actcaaatagttttaagtggaagaacagataaagaagttcactcatctggacaagtgttt
aattgtcaaataccttcgtattgggaagatttttttaaattaaaagagattttaaacaaa
aatcttccaacttctataaaaataaaaaaaatatcaaaagtagatgaaagttttcattca
agatttagtgcaaaaaaaagggtttatagatatttaattactacaaaagagacaacacct
tttaatgataaatttataacttatgtaaaaagtgtagatgaaaagcttttaaaaaaggct
ataaaagagtttattggaattcatgatttcaaatattttcataaaacaggaagtgataaa
gagaatacaaatagagaaatttttgatacaaaattttataaatataaagatatttatgtt
tttaagtttactgcaaattcatatttacgaagtcaaattaggcttatggttggattttta
cttgcaataaatgataaaaaattaactattgaagatttaagaaaacaactaaattgtgaa
aaaattatttttaaaactcctataaaaccaaatggtttgtatcttgcgaagataaaatat
tag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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