KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT205938
Entry
AGABI2DRAFT205938 CDS       T03140                                 
Symbol
AGABI2DRAFT_205938
Name
(RefSeq) hypothetical protein
  KO
K14530  ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AGABI2DRAFT205938 (AGABI2DRAFT_205938)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:abv03009]
    AGABI2DRAFT205938 (AGABI2DRAFT_205938)
   03016 Transfer RNA biogenesis [BR:abv03016]
    AGABI2DRAFT205938 (AGABI2DRAFT_205938)
   03029 Mitochondrial biogenesis [BR:abv03029]
    AGABI2DRAFT205938 (AGABI2DRAFT_205938)
Enzymes [BR:abv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     AGABI2DRAFT205938 (AGABI2DRAFT_205938)
Ribosome biogenesis [BR:abv03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     AGABI2DRAFT205938 (AGABI2DRAFT_205938)
Transfer RNA biogenesis [BR:abv03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    AGABI2DRAFT205938 (AGABI2DRAFT_205938)
Mitochondrial biogenesis [BR:abv03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    AGABI2DRAFT205938 (AGABI2DRAFT_205938)
SSDB
Motif
Pfam: Ribonuc_P_40
Other DBs
NCBI-GeneID: 18084203
NCBI-ProteinID: XP_006461914
JGI: Agabi_varbisH97_2_205938
Position
Unknown
AA seq 393 aa
MGSFEKRHIKVSSPSRIEALASSHPFTRQVDIVFPAGCCIELENALSRLSTQYVKGRVDL
EKVFAAGPAFVRQYKSAALQGEQNNQSRDVWCIDTRGVLTSCIDKETYEKLGLVGQKMTF
KHQNDERYVISWPLHQNAETGPMRSRIRRVLESWDTGFVAVGAWNVIYCSTDIDINDGEF
IQVPVADPTTHKVDCEKKFLENVWIPNPSSIPPRPNQNQKDELEDWEHDISALHEWVGMA
GLHAERLFANDRVDPYVALYDPPTTSRVGNIVHLRWTGFLPPEFVQLMIDTTSTYLKESM
KPSSHPSSDDMFVAMTVHGITNSPVVYLPSQSSGIKAKKSESLVSTHDPATAHLPREDGE
DTWCLIVMPPKEKRGGVMCILVESVGQWDARWG
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgggctcatttgaaaaacgacatatcaaagtttcaagtccctcacggatcgaagctctg
gcctcttctcatcccttcacccgccaggtagacattgtctttcccgcgggatgttgtatc
gaactcgaaaacgctctatctcgtctcagcacgcaatatgtaaaagggagagtggatcta
gaaaaagtctttgctgccggtccggcatttgtgcgacaatataaatcagccgcgctacaa
ggagagcagaacaatcaaagtcgcgatgtttggtgtatcgatacgcgcggtgtcttgacg
tcgtgtattgacaaagagacgtacgaaaaactgggccttgtaggtcaaaaaatgacattc
aaacatcagaatgacgaacgatacgtcatatcttggccattgcatcaaaatgccgagact
ggtccaatgcgatcgcgaatacggcgcgttctggagtcatgggatacgggatttgttgct
gttggggcttggaatgttatttattgttctaccgatatagatatcaacgatggtgagttc
attcaagtacctgtggctgatccgacgactcataaagtcgactgcgagaagaaatttctc
gagaatgtatggatacccaatccatcatctataccaccccgtccaaatcagaatcaaaaa
gatgaattggaagactgggaacatgatatatcagctttacatgaatgggtaggtatggct
ggtttacacgctgaaaggctttttgcaaatgatcgcgttgacccatacgtcgcactatat
gaccctccaactaccagtcgagtggggaatatcgtacacctacggtggacgggattttta
cctcccgagttcgtccaattaatgattgatacgacatcgacatacttgaaagaatctatg
aagccatcatcacatccatcttcagatgacatgttcgtcgcaatgactgttcacggtatc
acgaactcccctgtcgtatatttaccatcccaatcatctggtatcaaggccaagaagagt
gaatcactggtatcaactcatgatccagcaactgcgcatttgccaagagaagatggggaa
gacacttggtgtttaattgtgatgcccccaaaggagaaaaggggtggtgtaatgtgtatt
cttgtggagagtgtggggcaatgggatgcgcgatggggataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system