KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT216556
Entry
AGABI2DRAFT216556 CDS       T03140                                 
Symbol
AGABI2DRAFT_216556
Name
(RefSeq) hypothetical protein
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
Organism
abv  Agaricus bisporus var. bisporus H97
Pathway
abv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:abv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AGABI2DRAFT216556 (AGABI2DRAFT_216556)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:abv03041]
    AGABI2DRAFT216556 (AGABI2DRAFT_216556)
Enzymes [BR:abv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AGABI2DRAFT216556 (AGABI2DRAFT_216556)
Spliceosome [BR:abv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    AGABI2DRAFT216556 (AGABI2DRAFT_216556)
 Complex C
   U5 SnRNP specific factors
    AGABI2DRAFT216556 (AGABI2DRAFT_216556)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA
Other DBs
NCBI-GeneID: 18084893
NCBI-ProteinID: XP_006458200
JGI: Agabi_varbisH97_2_216556
Position
Unknown
AA seq 747 aa
MASNRSEPLSIESLLQKQREEKEAAAKPKFLTKEERAKIAIAKRAQEIKEQKVRDEAVRK
DKETLEREAEDLAAKERNNRYGSGRYDDRYSHSDRDRDTRDRYSRRERENRGRPPPPPPP
ADDRRRENYQNVPTGPRADRGKNTPNSTHEHTPSSSMPPPPVPNSNSNGTLPESSLPYAP
PMSDNDLTAIRSRYLGVDKKKRKIRKMNDRKFVFDWDAQDDTFAEDSPVAVGSNRQGAQI
MFGRGHLAGMDDNGGPAVRRMPGGDNLADAMERRKATKVGIDERHWTDKPLVEMKERDWR
IFREDFSISARGGNIPHPLRSWRESQIPESILECIDRIGYKEPSPIQRQAIPIGLQNRDI
IGIAETGSGKTAAFVIPMLAFIGNLPLFTDDNRHLGPYSLILAPTRELAQQIESEARKFA
GPLGYKCVSIVGGRAVEEQQFNLREGAEIVIATPGRLKDVIERHVLVLSQCRYVVMDEAD
RMVNLGFEADLTFILDALPAETMQGEDPGEQMDVDGETLVKKGRTRVTTLFSATMPAAVE
RLARKYLKKPAVITIGEAGRAVDTVEQRVEFVGGDEKKKMRILEILNSNQYSPPIIVFVN
QKKTADMVAKDLSRGGWNAATLHSGKNQEQREASLQSLRNGESDVLVATDLAGRGIDVQD
VSLVINFQMANTIEAYVHRIGRTGRAGKLGTSITFLTNDDEEVMYDLKQEISKSPVSKVP
VELAKHEAAQHKVSREMKRKRDAEDQG
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggcctcgaaccgctcagagccgctctccatcgagtccctcctccaaaaacagcgtgag
gagaaagaggctgccgccaagcctaaattcttaaccaaggaagaacgagccaaaatcgct
atagcaaaacgtgctcaagaaatcaaagaacaaaaggtgcgagatgaggccgttcgaaaa
gacaaggaaaccctggaacgtgaagcagaagatttggccgccaaagaacgcaacaacaga
tacggtagtggtcgatatgacgacaggtattcccattcagatcgtgatagagatactagg
gatcgttatagtaggcgagaacgagagaatagaggtcgaccccctccaccgccacccccc
gcagacgaccgtcgtcgcgagaattatcagaacgtacccactggtcctcgcgcagaccga
ggcaagaatacgccaaatagcactcatgagcatacaccctcttcatctatgccaccgcca
cccgtccccaatagtaacagcaatggcactttacccgaatcgtcgcttccctacgctcca
cccatgtccgataatgacctcaccgccattcgatctcggtatctcggagtagacaagaag
aagcgcaaaatcagaaaaatgaatgacagaaagtttgttttcgattgggacgctcaagac
gatacatttgccgaagactcgcctgtggcagtagggagtaataggcaaggcgctcaaatc
atgtttggcaggggccacctggcgggcatggatgacaacggtggaccagctgtgaggaga
atgcctggaggggataacctagccgatgcaatggaacggcgaaaggccactaaagttggt
atcgacgaaaggcattggacagacaaaccgcttgttgagatgaaagaacgcgactggcgt
atattccgggaagactttagtatttccgctagaggtggcaatatccctcacccgcttagg
tcgtggagggaatcgcaaattcctgaatctatcctcgaatgtatcgatcgtattggctac
aaagaaccttcccctatccagaggcaggccataccaattggtcttcaaaatcgtgatatc
ataggtatagctgaaacaggttcgggtaaaacggccgcctttgtgattccaatgcttgct
ttcattggcaacttgccgctctttacggatgacaaccgacatctagggccctattcctta
attctcgccccaacccgtgaattagcacagcaaatcgagagcgaagcgcgcaagtttgct
ggtcccttgggatacaaatgtgtctcgatcgtcggaggtcgcgctgtcgaggaacaacaa
ttcaatttacgtgaaggtgcggaaattgtgatagcgacgccaggtcgtctcaaggatgta
attgaacggcatgtcctcgttctctcacaatgtcgatatgtggtcatggacgaagccgac
cgtatggtcaacctcggttttgaagccgacttgaccttcattttggacgctttgccagca
gaaactatgcagggtgaggaccctggcgagcagatggacgtggatggcgaaacattggtc
aagaaaggtcgaactcgcgttaccactttattctcagctaccatgccagccgcggttgag
cgtctggctagaaaatacctcaagaagcctgctgttattactattggtgaagctggccgt
gcggttgacacggtggaacaacgagttgagttcgtcggtggagacgaaaagaagaagatg
cgcatactggaaatactcaacagcaatcaatactcacctcctattatcgtatttgtgaac
caaaagaaaacagccgacatggtcgctaaagacttgtcccggggtggatggaatgctgcg
accttacattctggtaaaaaccaagaacaaagagaagcatcactacagtctttgcgcaat
ggagaatcggatgttctggttgcgaccgacttggctggccgtggcattgatgtccaagat
gttagccttgtgatcaacttccaaatggcgaataccatagaggcttatgtccaccgcata
ggtcgtaccggtcgtgctggaaaattgggcacttctattactttcctgacgaatgatgat
gaagaagtcatgtacgatctcaagcaagaaatttcaaaaagtcctgtatcaaaggttcca
gttgaacttgctaagcatgaagctgctcagcacaaagtctcgcgggagatgaaaaggaaa
cgtgacgccgaagatcaaggt

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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